RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 Q8N814 137 aa4.52□□□□□ -1.69
LRRC28-207ENST00000558500 ZNF738Q8NE65 137 aa4.52□□□□□ -1.69
LRRC28-207ENST00000558500 OR8A1Q8NGG7 326 aa4.52□□□□□ -1.69
LRRC28-207ENST00000558500 OR4D5Q8NGN0 318 aa4.52□□□□□ -1.69
LRRC28-207ENST00000558500 OR1B1Q8NGR6 318 aa4.52□□□□□ -1.69
LRRC28-207ENST00000558500 C20orf144Q9BQM9 153 aa4.52□□□□□ -1.69
LRRC28-207ENST00000558500 SLC25A22Q9H936 323 aa4.52□□□□□ -1.69
LRRC28-207ENST00000558500 SSR3Q9UNL2 185 aa4.52□□□□□ -1.69
LRRC28-207ENST00000558500 ICOSQ9Y6W8 199 aa4.52□□□□□ -1.69
LRRC28-207ENST00000558500 GABARAPH6UMI1 98 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 PSCAO43653 123 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 ZNF324O75467 553 aaPredicted RBP4.51□□□□□ -1.69
LRRC28-207ENST00000558500 GABARAPO95166 117 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 EVI2AP22794 236 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 GPX4P36969 197 aaPredicted RBP4.51□□□□□ -1.69
LRRC28-207ENST00000558500 NHLH2Q02577 135 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 DAZ2Q13117 558 aaKnown RBP4.51□□□□□ -1.69
LRRC28-207ENST00000558500 BAK1Q16611 211 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 WFDC10BQ8IUB3 73 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 GPX8Q8TED1 209 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 SLC35E1Q96K37 410 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 GPR82Q96P67 336 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 TRGV9Q99603 122 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 CACNG5Q9UF02 275 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 U3KQ87 197 aa4.51□□□□□ -1.69
LRRC28-207ENST00000558500 TRGV2A0A075B6R0 118 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 DIRC3C9JPN6 131 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 B3GALNT1O75752 331 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 CDS2O95674 445 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 CFDP00746 253 aaPredicted RBP4.5□□□□□ -1.69
LRRC28-207ENST00000558500 CXCL3P19876 107 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 FGL1Q08830 312 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 PSG3Q16557 428 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 UBE2NLQ5JXB2 153 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 GFI1BQ5VTD9 330 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 DGAT2L7PQ6IED9 249 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 SCXQ7RTU7 201 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 LHFPL1Q86WI0 220 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 LGI3Q8N145 548 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 LHFPL5Q8TAF8 219 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 TMEM222Q9H0R3 208 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 COPZ2Q9P299 210 aa4.5□□□□□ -1.69
LRRC28-207ENST00000558500 IGKV1OR2-108A0A075B7D4 117 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 PGPEP1LA6NFU8 196 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 CRYGDP07320 174 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 PRB4P10163 310 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-207ENST00000558500 ORM2P19652 201 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 AQP4P55087 323 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 ATP5IP56385 69 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-207ENST00000558500 TIRAPP58753 221 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 MEF2DQ14814 521 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 MRPL23Q16540 153 aaKnown RBP4.49□□□□□ -1.69
LRRC28-207ENST00000558500 GGNBP1Q5YKI7 109 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 NEGR1Q7Z3B1 354 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 SELENOHQ8IZQ5 122 aaKnown RBP4.49□□□□□ -1.69
LRRC28-207ENST00000558500 C10orf126Q8N4M7 172 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 SAMD12Q8N8I0 201 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 CCDC71LQ8N9Z2 235 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 THAP8Q8NA92 274 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 DTD1Q8TEA8 209 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 RBPMSQ93062 196 aaKnown RBP4.49□□□□□ -1.69
LRRC28-207ENST00000558500 IL22RA2Q969J5 263 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 RPUSD4Q96CM3 377 aaKnown RBP4.49□□□□□ -1.69
LRRC28-207ENST00000558500 PARD6GQ9BYG4 376 aaPredicted RBP4.49□□□□□ -1.69
LRRC28-207ENST00000558500 CACFD1Q9UGQ2 172 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 PRO0255Q9UI72 69 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 BLOC1S6Q9UL45 172 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 FUT9Q9Y231 359 aa4.49□□□□□ -1.69
LRRC28-207ENST00000558500 TNXBP22105 4242 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 TRGV1A0A0A0MS02 117 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 TEX13DA0A0J9YY54 714 aaPredicted RBP4.48□□□□□ -1.69
LRRC28-207ENST00000558500 LOC100506127A0A0U1RQW1 187 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 MT1HL1P0DM35 61 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 S100A7P31151 101 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 CRYBA4P53673 196 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 LRTM2Q8N967 370 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 BPIFCQ8NFQ6 507 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 ZFAND1Q8TCF1 268 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 GLYATL2Q8WU03 294 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 TMEM147Q9BVK8 224 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 GSN-AS1Q9NRJ2 163 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 HSPB7Q9UBY9 170 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 TMEM56-RWDD3S4R434 201 aa4.48□□□□□ -1.69
LRRC28-207ENST00000558500 A0A087X0K7 114 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 TRAV5A0A0B4J249 113 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 F5H697 171 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 H3BRN7 92 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 RS1O15537 224 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 TRIAP1O43715 76 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 PRAF2O60831 178 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 IGHV3-53P01767 116 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 SULT1A3P0DMM9 295 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 SULT1A4P0DMN0 295 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 RPL7P18124 248 aaKnown RBP4.47□□□□□ -1.69
LRRC28-207ENST00000558500 GATA2P23769 480 aaPredicted RBP4.47□□□□□ -1.69
LRRC28-207ENST00000558500 ASIPP42127 132 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 SLAQ13239 276 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 RNASE10Q5GAN6 216 aaKnown RBP4.47□□□□□ -1.69
LRRC28-207ENST00000558500 GPR107Q5VW38 600 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms