RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 KIF26BQ2KJY2 2108 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 GREB1Q4ZG55 1949 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 IGHV3-38A0A0C4DH36 116 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 CGB7P0DN87 165 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 UNQ6494/PRO21346Q6UXR6 183 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 Q96MF0 132 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 IGHV1-3A0A0C4DH29 117 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 XCL2Q9UBD3 114 aa11.37□□□□□ -0.59
SPG11-210ENST00000558319 MBD3L4A6NDZ8 208 aaPredicted RBP11.36□□□□□ -0.59
SPG11-210ENST00000558319 MBD3L3A6NE82 208 aaPredicted RBP11.36□□□□□ -0.59
SPG11-210ENST00000558319 MBD3L5A6NJ08 208 aaPredicted RBP11.36□□□□□ -0.59
SPG11-210ENST00000558319 ARMS2P0C7Q2 107 aa11.36□□□□□ -0.59
SPG11-210ENST00000558319 SLC25A16P16260 332 aa11.36□□□□□ -0.59
SPG11-210ENST00000558319 MBD3L2Q8NHZ7 208 aaPredicted RBP11.36□□□□□ -0.59
SPG11-210ENST00000558319 TNS1Q9HBL0 1735 aaKnown RBP11.36□□□□□ -0.59
SPG11-210ENST00000558319 IGKV1-27A0A075B6S5 117 aa11.36□□□□□ -0.59
SPG11-210ENST00000558319 GAGE12HA6NDE8 117 aa11.36□□□□□ -0.59
SPG11-210ENST00000558319 C8orf49Q96NF6 230 aa11.36□□□□□ -0.59
SPG11-210ENST00000558319 OVOL2Q9BRP0 275 aa11.36□□□□□ -0.59
SPG11-210ENST00000558319 LINC01559Q495D7 138 aa11.36□□□□□ -0.59
SPG11-210ENST00000558319 NYNRINQ9P2P1 1898 aaKnown RBP11.36□□□□□ -0.59
SPG11-210ENST00000558319 DOCK6Q96HP0 2047 aa11.36□□□□□ -0.59
SPG11-210ENST00000558319 TAF1LQ8IZX4 1826 aa11.36□□□□□ -0.59
SPG11-210ENST00000558319 COL4A6Q14031 1691 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 TRBV20-1A0A075B6N2 111 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 H3BMG7 143 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 SP5Q6BEB4 398 aaPredicted RBP11.35□□□□□ -0.59
SPG11-210ENST00000558319 TRAV25A0A0B4J276 109 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 FGF6P10767 208 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 RPL36AP83881 106 aaKnown RBP11.35□□□□□ -0.59
SPG11-210ENST00000558319 SLAQ13239 276 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 C5orf47Q569G3 176 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 RPL36ALQ969Q0 106 aaKnown RBP11.35□□□□□ -0.59
SPG11-210ENST00000558319 F5H768 121 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 IGHV2-70P01814 119 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 PFN2P35080 140 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 PMVKQ15126 192 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 RBBP6Q7Z6E9 1792 aaKnown RBP11.35□□□□□ -0.59
SPG11-210ENST00000558319 AHCTF1Q8WYP5 2266 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 B5MCH6 92 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 Q6ZVH6 145 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 LHFPL1Q86WI0 220 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 PPDPFLQ8WWR9 84 aa11.35□□□□□ -0.59
SPG11-210ENST00000558319 HEATR1Q9H583 2144 aaKnown RBP11.34□□□□□ -0.59
SPG11-210ENST00000558319 PSPNO60542 156 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 DTX2Q86UW9 622 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 FANCMQ8IYD8 2048 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 TINCRA0A1B0GVN0 87 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 LYPD3O95274 346 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 IGHV1-8P0DP01 117 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 Q6ZWC4 215 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 DOCK4Q8N1I0 1966 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 FAM90A9PA6NNJ1 464 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 K7EP34 96 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 IGLV2-23P01705 113 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 NMSQ5H8A3 153 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 TRAV12-2A0A075B6T6 113 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 LOC102723996A0A087X1L8 192 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 BOD1L2Q8IYS8 172 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 GBF1Q92538 1859 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 C1orf43Q9BWL3 253 aa11.34□□□□□ -0.59
SPG11-210ENST00000558319 TRAV26-2A0A0B4J265 109 aa11.33□□□□□ -0.6
SPG11-210ENST00000558319 EFNA2O43921 213 aa11.33□□□□□ -0.6
SPG11-210ENST00000558319 TP53TG1Q9Y2A0 90 aa11.33□□□□□ -0.6
SPG11-210ENST00000558319 A0A0G2JRQ6 117 aa11.33□□□□□ -0.6
SPG11-210ENST00000558319 WIPF3A6NGB9 483 aa11.33□□□□□ -0.6
SPG11-210ENST00000558319 GAS1P54826 345 aa11.33□□□□□ -0.6
SPG11-210ENST00000558319 E9PLN8 166 aa11.33□□□□□ -0.6
SPG11-210ENST00000558319 TCF20Q9UGU0 1960 aaKnown RBP11.33□□□□□ -0.6
SPG11-210ENST00000558319 CYYR1Q96J86 154 aa11.33□□□□□ -0.6
SPG11-210ENST00000558319 RBM3P98179 157 aaKnown RBP11.33□□□□□ -0.6
SPG11-210ENST00000558319 C18orf32Q8TCD1 76 aa11.33□□□□□ -0.6
SPG11-210ENST00000558319 LINC00473A8K010 186 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 F8W1H4 67 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 TCTEX1D4Q5JR98 221 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 C20orf144Q9BQM9 153 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 FBLN5Q9UBX5 448 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 GAGE12JA6NER3 117 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 DEFB131AP59861 70 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 GAGE4Q13068 117 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 GAGE5Q13069 117 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 TMEM178BH3BS89 294 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 BRCA1P38398 1863 aaKnown RBP11.32□□□□□ -0.6
SPG11-210ENST00000558319 A0A1W2PPM0 123 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 TMEM14EPQ6UXP3 125 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 LRRK1Q38SD2 2015 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.32□□□□□ -0.6
SPG11-210ENST00000558319 LY6G5BQ8NDX9 201 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 LIME1Q9H400 295 aa11.32□□□□□ -0.6
SPG11-210ENST00000558319 CEP290O15078 2479 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 IGLC2P0DOY2 106 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 IGLC3P0DOY3 106 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 TRGV9Q99603 122 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 SDK2Q58EX2 2172 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 SBF2Q86WG5 1849 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 IGLL1P15814 213 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 RNASE13Q5GAN3 156 aaKnown RBP11.31□□□□□ -0.6
SPG11-210ENST00000558319 BVES-AS1Q5T3Y7 98 aa11.31□□□□□ -0.6
SPG11-210ENST00000558319 A0A1B0GWJ7 208 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms