RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 TMEM218A2RU14 115 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 OR4C46A6NHA9 309 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 CHEK1O14757 476 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 RPL35AP18077 110 aaKnown RBP5.59□□□□□ -1.51
SPG11-205ENST00000558080 FCGR2BP31994 310 aaPredicted RBP5.59□□□□□ -1.51
SPG11-205ENST00000558080 GPX4P36969 197 aaPredicted RBP5.59□□□□□ -1.51
SPG11-205ENST00000558080 OPRK1P41145 380 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 FHITP49789 147 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 AKR1C1Q04828 323 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 PEA15Q15121 130 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 GUK1Q16774 197 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 ACOT6Q3I5F7 207 aaPredicted RBP5.59□□□□□ -1.51
SPG11-205ENST00000558080 ODF3L2Q3SX64 289 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 FFAR4Q5NUL3 377 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 TEPPQ6URK8 271 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 CCDC28AQ8IWP9 274 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 GBGT1Q8N5D6 347 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 IL17DQ8TAD2 202 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 MBD3L1Q8WWY6 194 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 SLC35E1Q96K37 410 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 LINC00052Q96N35 136 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 SMDT1Q9H4I9 107 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 RFNGQ9Y644 331 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 X6R8D5 127 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 RYR2Q92736 4967 aa5.59□□□□□ -1.51
SPG11-205ENST00000558080 IGHV3-66A0A0C4DH42 116 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 CTXND1A0A1B0GTU2 59 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 CORTO00230 105 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 AGPAT2O15120 278 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 APOHP02749 345 aaPredicted RBP5.58□□□□□ -1.52
SPG11-205ENST00000558080 CD5P06127 495 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 M6PRP20645 277 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 NPBWR1P48145 328 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 APOC4P55056 127 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 DEFB135Q30KP9 77 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 ETFRF1Q6IPR1 90 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 TOMM20LQ6UXN7 152 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 TMEM144Q7Z5S9 345 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 APRG1Q8IVJ8 170 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 OR10G4Q8NGN3 311 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 OR10G9Q8NGN4 311 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 OR10G7Q8NGN6 311 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 SFT2D1Q8WV19 159 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 ACTR3CQ9C0K3 210 aaPredicted RBP5.58□□□□□ -1.52
SPG11-205ENST00000558080 EIF5A2Q9GZV4 153 aaKnown RBP5.58□□□□□ -1.52
SPG11-205ENST00000558080 RPRMQ9NS64 109 aa5.58□□□□□ -1.52
SPG11-205ENST00000558080 MRPL36Q9P0J6 103 aaKnown RBP5.58□□□□□ -1.52
SPG11-205ENST00000558080 MAP1LC3B2A6NCE7 125 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 SPRY2O43597 315 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 IFNA1P01562 189 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 TAGLN2P37802 199 aaKnown RBP5.57□□□□□ -1.52
SPG11-205ENST00000558080 RPL29P47914 159 aaKnown RBP5.57□□□□□ -1.52
SPG11-205ENST00000558080 CDC34P49427 236 aaPredicted RBP5.57□□□□□ -1.52
SPG11-205ENST00000558080 PVRIGQ6DKI7 326 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 FAM122CQ6P4D5 195 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 ZNF600Q6ZNG1 722 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 TCF24Q7RTU0 167 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 STPG3Q8N7X2 389 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 MGST2Q99735 147 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 SEC11CQ9BY50 192 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 MAP1LC3BQ9GZQ8 125 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 FNDC4Q9H6D8 234 aaPredicted RBP5.57□□□□□ -1.52
SPG11-205ENST00000558080 TMEM231Q9H6L2 316 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 VSIRQ9H7M9 311 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 SLC39A9Q9NUM3 307 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 PUS1Q9Y606 427 aaKnown RBP eCLIP5.57□□□□□ -1.52
SPG11-205ENST00000558080 PXMP4Q9Y6I8 212 aa5.57□□□□□ -1.52
SPG11-205ENST00000558080 A0A0J9YWU9 116 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 A0A1B0GV50 99 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 RBFOX3A6NFN3 312 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 F8W036 122 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 DNASE2O00115 360 aaPredicted RBP5.56□□□□□ -1.52
SPG11-205ENST00000558080 UBE2CO00762 179 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 APOC3P02656 99 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 SFTA3P0C7M3 94 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 PPT1P50897 306 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 B2MP61769 119 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 RPL11P62913 178 aaKnown RBP5.56□□□□□ -1.52
SPG11-205ENST00000558080 PAFAH1B2P68402 229 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 PMS2P11Q13670 270 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 GAMTQ14353 236 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 ZNF726P1Q15940 193 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 TIGITQ495A1 244 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 KHDC3LQ587J8 217 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 ZNF506Q5JVG8 444 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 C10orf91Q5T1B1 145 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 FAM90A2PQ658T7 463 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 LCN15Q6UWW0 184 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 Q6ZWC4 215 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 RPP25LQ8N5L8 163 aaKnown RBP5.56□□□□□ -1.52
SPG11-205ENST00000558080 SLC25A22Q9H936 323 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 MAP6D1Q9H9H5 199 aa5.56□□□□□ -1.52
SPG11-205ENST00000558080 CARHSP1Q9Y2V2 147 aaKnown RBP5.56□□□□□ -1.52
SPG11-205ENST00000558080 SACSQ9NZJ4 4579 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 KIR2DL5BA0A0G2JN68 375 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 KIR2DL5BA0A0G2JPC4 375 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 LOC102723971A0A1B0GUV8 181 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 A0A1W2PPV4 95 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 CLN5O75503 358 aa5.55□□□□□ -1.52
SPG11-205ENST00000558080 NPPCP23582 126 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms