RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PQLC2Q6ZP29 291 aa10.12□□□□□ -0.79
SHMT2-234ENST00000557703 APRG1Q8IVJ8 170 aa10.12□□□□□ -0.79
SHMT2-234ENST00000557703 FAM24BQ8N5W8 94 aa10.12□□□□□ -0.79
SHMT2-234ENST00000557703 CITED4Q96RK1 184 aa10.12□□□□□ -0.79
SHMT2-234ENST00000557703 ARPC5LQ9BPX5 153 aa10.12□□□□□ -0.79
SHMT2-234ENST00000557703 CSTL1Q9H114 145 aa10.12□□□□□ -0.79
SHMT2-234ENST00000557703 WFDC10AQ9H1F0 79 aa10.12□□□□□ -0.79
SHMT2-234ENST00000557703 KANTRA0A1W2PQU2 76 aa10.11□□□□□ -0.79
SHMT2-234ENST00000557703 HLA-DRB4P13762 266 aa10.11□□□□□ -0.79
SHMT2-234ENST00000557703 RPL7L1Q6DKI1 246 aaKnown RBP10.11□□□□□ -0.79
SHMT2-234ENST00000557703 LYPD1Q8N2G4 141 aa10.11□□□□□ -0.79
SHMT2-234ENST00000557703 HSD17B11Q8NBQ5 300 aa10.11□□□□□ -0.79
SHMT2-234ENST00000557703 OR11H4Q8NGC9 324 aa10.11□□□□□ -0.79
SHMT2-234ENST00000557703 MRPL53Q96EL3 112 aaKnown RBP10.11□□□□□ -0.79
SHMT2-234ENST00000557703 SAT2Q96F10 170 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-234ENST00000557703 C17orf77Q96MU5 243 aa10.11□□□□□ -0.79
SHMT2-234ENST00000557703 C1QTNF4Q9BXJ3 329 aa10.11□□□□□ -0.79
SHMT2-234ENST00000557703 OR51M1Q9H341 326 aa10.11□□□□□ -0.79
SHMT2-234ENST00000557703 SAV1Q9H4B6 383 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-234ENST00000557703 ZNF331Q9NQX6 463 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-234ENST00000557703 PRELID1Q9Y255 219 aa10.11□□□□□ -0.79
SHMT2-234ENST00000557703 HLA-DRB4X5D2U9 266 aa10.11□□□□□ -0.79
SHMT2-234ENST00000557703 H3BMM0 161 aa10.1□□□□□ -0.79
SHMT2-234ENST00000557703 DUSP14O95147 198 aaKnown RBP10.1□□□□□ -0.79
SHMT2-234ENST00000557703 PSG3Q16557 428 aa10.1□□□□□ -0.79
SHMT2-234ENST00000557703 MORN5Q5VZ52 161 aa10.1□□□□□ -0.79
SHMT2-234ENST00000557703 TRPT1Q86TN4 253 aaKnown RBP10.1□□□□□ -0.79
SHMT2-234ENST00000557703 OR10G4Q8NGN3 311 aa10.1□□□□□ -0.79
SHMT2-234ENST00000557703 OR10G9Q8NGN4 311 aa10.1□□□□□ -0.79
SHMT2-234ENST00000557703 OR10G7Q8NGN6 311 aa10.1□□□□□ -0.79
SHMT2-234ENST00000557703 FAM167A-AS1Q96KT0 104 aa10.1□□□□□ -0.79
SHMT2-234ENST00000557703 LINC00052Q96N35 136 aa10.1□□□□□ -0.79
SHMT2-234ENST00000557703 NBEAL2Q6ZNJ1 2754 aa10.1□□□□□ -0.79
SHMT2-234ENST00000557703 STAB2Q8WWQ8 2551 aa10.1□□□□□ -0.79
SHMT2-234ENST00000557703 TRBV19A0A075B6N1 114 aa10.09□□□□□ -0.79
SHMT2-234ENST00000557703 SMLR1H3BR10 107 aa10.09□□□□□ -0.79
SHMT2-234ENST00000557703 BCL2L11O43521 198 aa10.09□□□□□ -0.79
SHMT2-234ENST00000557703 NBEAP1P0C6P0 100 aa10.09□□□□□ -0.79
SHMT2-234ENST00000557703 SEC11BP0C7V7 166 aa10.09□□□□□ -0.79
SHMT2-234ENST00000557703 GCSAMLQ5JQS6 135 aa10.09□□□□□ -0.79
SHMT2-234ENST00000557703 ACTL10Q5JWF8 245 aa10.09□□□□□ -0.79
SHMT2-234ENST00000557703 EIF5AL1Q6IS14 154 aaKnown RBP10.09□□□□□ -0.79
SHMT2-234ENST00000557703 PAXXQ9BUH6 204 aa10.09□□□□□ -0.79
SHMT2-234ENST00000557703 SLC25A2Q9BXI2 301 aa10.09□□□□□ -0.79
SHMT2-234ENST00000557703 CYTL1Q9NRR1 136 aa10.09□□□□□ -0.79
SHMT2-234ENST00000557703 COL7A1Q02388 2944 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 TRAV5A0A0B4J249 113 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 A0A0J9YX75 114 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 A8MTW9 85 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 UMAD1C9J7I0 102 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 H3BQ15 152 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 AKR1C8PQ5T2L2 129 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 MIR17HGQ75NE6 70 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 ARL6IP6Q8N6S5 226 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 RNF141Q8WVD5 230 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 ACTR3CQ9C0K3 210 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-234ENST00000557703 AAMDCQ9H7C9 122 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 ZNF586Q9NXT0 402 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 U3KQK5 164 aa10.08□□□□□ -0.8
SHMT2-234ENST00000557703 AGRNO00468 2067 aa10.07□□□□□ -0.8
SHMT2-234ENST00000557703 TRAV8-2A0A0B4J237 113 aa10.07□□□□□ -0.8
SHMT2-234ENST00000557703 OR7C2O60412 319 aa10.07□□□□□ -0.8
SHMT2-234ENST00000557703 PFDN1O60925 122 aa10.07□□□□□ -0.8
SHMT2-234ENST00000557703 AMBPP02760 352 aa10.07□□□□□ -0.8
SHMT2-234ENST00000557703 CDC34P49427 236 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-234ENST00000557703 TMUB2Q71RG4 321 aa10.07□□□□□ -0.8
SHMT2-234ENST00000557703 RPP25LQ8N5L8 163 aaKnown RBP10.07□□□□□ -0.8
SHMT2-234ENST00000557703 STOML3Q8TAV4 291 aa10.07□□□□□ -0.8
SHMT2-234ENST00000557703 STAG3L2P0CL84 134 aa10.06□□□□□ -0.8
SHMT2-234ENST00000557703 STAG3L3P0CL85 134 aa10.06□□□□□ -0.8
SHMT2-234ENST00000557703 TPT1P13693 172 aaKnown RBP10.06□□□□□ -0.8
SHMT2-234ENST00000557703 RPL35AP18077 110 aaKnown RBP10.06□□□□□ -0.8
SHMT2-234ENST00000557703 FAM74A1Q5RGS3 127 aa10.06□□□□□ -0.8
SHMT2-234ENST00000557703 DPPA3Q6W0C5 159 aa10.06□□□□□ -0.8
SHMT2-234ENST00000557703 BAP18Q8IXM2 172 aa10.06□□□□□ -0.8
SHMT2-234ENST00000557703 ZNF738Q8NE65 137 aa10.06□□□□□ -0.8
SHMT2-234ENST00000557703 RPUSD4Q96CM3 377 aaKnown RBP10.06□□□□□ -0.8
SHMT2-234ENST00000557703 RNF183Q96D59 192 aa10.06□□□□□ -0.8
SHMT2-234ENST00000557703 ASCL2Q99929 193 aa10.06□□□□□ -0.8
SHMT2-234ENST00000557703 ZNF471Q9BX82 626 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-234ENST00000557703 hCG_2014768A0A024R1R8 64 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 KNCNA6PVL3 124 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 SPRY2O43597 315 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 CXorf1O96002 111 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 RAB5CP51148 216 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 RAB2AP61019 212 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 ZNF124Q15973 351 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 ZFP69Q49AA0 526 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 OR8A1Q8NGG7 326 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 RAB24Q969Q5 203 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 FXYD5Q96DB9 178 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 RCHY1Q96PM5 261 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 TMEM167BQ9NRX6 74 aa10.05□□□□□ -0.8
SHMT2-234ENST00000557703 CTXND1A0A1B0GTU2 59 aa10.04□□□□□ -0.8
SHMT2-234ENST00000557703 NDUFB4O95168 129 aa10.04□□□□□ -0.8
SHMT2-234ENST00000557703 CA1P00915 261 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-234ENST00000557703 PYYP10082 97 aa10.04□□□□□ -0.8
SHMT2-234ENST00000557703 UBE2L3P68036 154 aaKnown RBP10.04□□□□□ -0.8
SHMT2-234ENST00000557703 LGALSLQ3ZCW2 172 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-234ENST00000557703 SLC51BQ86UW2 128 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms