RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 DYNLRB1Q9NP97 96 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 SIGLEC8Q9NYZ4 499 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 A0A096LNJ9 63 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 LOC389332A0A1B0GUA5 103 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 GAGE10A6NGK3 116 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 BUB1B-PAK6H3BSN5 160 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 FAM106CPP0CH98 169 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 APOBEC3AP31941 199 aaPredicted RBP9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 FOXE3Q13461 319 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 FAM106AQ4KMX7 169 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 U3KQK5 164 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 FAM104BQ5XKR9 115 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 ORMDL3Q8N138 153 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 RNF125Q96EQ8 232 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 ZNF414Q96IQ9 312 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 RABAC1Q9UI14 185 aa9.33□□□□□ -0.92
VIPAS39-211ENST00000557658 TMEM189A5PLL7 270 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 H3BRM9 83 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 CNIH1O95406 144 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 THBDP07204 575 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 UQCRFS1P47985 274 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 LOXL1Q08397 574 aaPredicted RBP9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 LYZL1Q6UWQ5 148 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 GTF2H5Q6ZYL4 71 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 BOD1L2Q8IYS8 172 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 ZNF491Q8N8L2 437 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 RPEQ96AT9 228 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 PKDREJQ9NTG1 2253 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 K7EIM0 57 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 IL4P05112 153 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 DLX1P56177 255 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 S100A7AQ86SG5 101 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 OR9G4Q8NGQ1 327 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 C8orf49Q96NF6 230 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 RNF5Q99942 180 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 AAMDCQ9H7C9 122 aa9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 RALYQ9UKM9 306 aaKnown RBP9.32□□□□□ -0.92
VIPAS39-211ENST00000557658 A0A0G2JNJ9 132 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 TMEM213A2RRL7 107 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 C9orf118A6NHY6 69 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 M0R3E3 92 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 MRPS12O15235 138 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 KLK10O43240 276 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 HBDP02042 147 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 FCGR2BP31994 310 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 CACNG7P62955 275 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 PRB3Q04118 309 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 PIP4P2Q8N4L2 257 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 Q9UFV3 132 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 A1L4Q6 167 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 SMAD7O15105 426 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 PRB4P10163 310 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 HSD52Q0P140 79 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 PDE6HQ13956 83 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 AMN1Q8IY45 258 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 ZGRF1Q86YA3 2104 aa9.31□□□□□ -0.92
VIPAS39-211ENST00000557658 TMSB15BA0A087X1C1 80 aa9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 SIVA1O15304 175 aa9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 COX7A1P24310 79 aa9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 IGF2-ASQ6U949 168 aa9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 CEP250Q9BV73 2442 aa9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 WI2-2373I1.2A0A1W2PRP0 233 aa9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 SH2D1AO60880 128 aa9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 MRPL51Q4U2R6 128 aaKnown RBP9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 UFSP1Q6NVU6 142 aa9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 OR4X2Q8NGF9 303 aa9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 COL25A1Q9BXS0 654 aaPredicted RBP9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 RAB1BQ9H0U4 201 aa9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 THYN1Q9P016 225 aa9.3□□□□□ -0.92
VIPAS39-211ENST00000557658 PRRG2O14669 202 aa9.29□□□□□ -0.92
VIPAS39-211ENST00000557658 IFI27L1Q96BM0 104 aa9.29□□□□□ -0.92
VIPAS39-211ENST00000557658 KIR3DS1Q14943 382 aa9.29□□□□□ -0.92
VIPAS39-211ENST00000557658 ZFHX4Q86UP3 3567 aa9.29□□□□□ -0.92
VIPAS39-211ENST00000557658 H3BUT2 72 aa9.28□□□□□ -0.92
VIPAS39-211ENST00000557658 CKS2P33552 79 aa9.28□□□□□ -0.92
VIPAS39-211ENST00000557658 FER1L6-AS1Q8NA97 138 aa9.28□□□□□ -0.92
VIPAS39-211ENST00000557658 CSTL1Q9H114 145 aa9.28□□□□□ -0.92
VIPAS39-211ENST00000557658 MEGF9Q9H1U4 602 aa9.28□□□□□ -0.92
VIPAS39-211ENST00000557658 K7EP34 96 aa9.28□□□□□ -0.92
VIPAS39-211ENST00000557658 GNG7O60262 68 aa9.28□□□□□ -0.92
VIPAS39-211ENST00000557658 FXYD7P58549 80 aa9.28□□□□□ -0.92
VIPAS39-211ENST00000557658 PAX8Q06710 450 aa9.28□□□□□ -0.92
VIPAS39-211ENST00000557658 JMJD8Q96S16 334 aa9.28□□□□□ -0.92
VIPAS39-211ENST00000557658 PPIAL4CA0A0B4J2A2 164 aa9.27□□□□□ -0.92
VIPAS39-211ENST00000557658 A0A0G2JLM5 398 aa9.27□□□□□ -0.92
VIPAS39-211ENST00000557658 E7EQL1 145 aa9.27□□□□□ -0.92
VIPAS39-211ENST00000557658 PPIAL4GP0DN37 164 aa9.27□□□□□ -0.92
VIPAS39-211ENST00000557658 TCTAP57738 103 aa9.27□□□□□ -0.92
VIPAS39-211ENST00000557658 ADAMTSL5Q6ZMM2 481 aa9.27□□□□□ -0.92
VIPAS39-211ENST00000557658 HILPDAQ9Y5L2 63 aa9.27□□□□□ -0.92
VIPAS39-211ENST00000557658 LY6LH3BQJ8 138 aa9.27□□□□□ -0.93
VIPAS39-211ENST00000557658 TWIST1Q15672 202 aa9.27□□□□□ -0.93
VIPAS39-211ENST00000557658 COX8CQ7Z4L0 72 aa9.27□□□□□ -0.93
VIPAS39-211ENST00000557658 OR2K2Q8NGT1 345 aa9.27□□□□□ -0.93
VIPAS39-211ENST00000557658 BDP1A6H8Y1 2624 aa9.27□□□□□ -0.93
VIPAS39-211ENST00000557658 FBLL1A6NHQ2 334 aaKnown RBP9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 SHISA9B4DS77 424 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 TIMM23O14925 209 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 NPYP01303 97 aa9.26□□□□□ -0.93
VIPAS39-211ENST00000557658 NMUP48645 174 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms