RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 NPPCP23582 126 aa9.49□□□□□ -0.89
SHMT2-230ENST00000557427 UBE2G2P60604 165 aa9.49□□□□□ -0.89
SHMT2-230ENST00000557427 RPL23P62829 140 aaKnown RBP9.49□□□□□ -0.89
SHMT2-230ENST00000557427 Q8N1Y9 231 aa9.49□□□□□ -0.89
SHMT2-230ENST00000557427 TMEM37Q8WXS4 190 aa9.49□□□□□ -0.89
SHMT2-230ENST00000557427 C11orf52Q96A22 123 aa9.49□□□□□ -0.89
SHMT2-230ENST00000557427 ISOC2Q96AB3 205 aa9.49□□□□□ -0.89
SHMT2-230ENST00000557427 TMEM68Q96MH6 324 aa9.49□□□□□ -0.89
SHMT2-230ENST00000557427 DOK5Q9P104 306 aa9.49□□□□□ -0.89
SHMT2-230ENST00000557427 ELOA3CA0A087WX78 387 aaPredicted RBP9.48□□□□□ -0.89
SHMT2-230ENST00000557427 NPIPB5A8MRT5 1133 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 I3L2K1 104 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 COX7A2P2O60397 106 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 SAP30O75446 220 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 LY6G6CO95867 125 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 RAB5AP20339 215 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 PLP1P60201 277 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 ZNF674Q2M3X9 581 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 C10orf113Q5VZT2 155 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 OR4X1Q8NH49 305 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 ZNF503Q96F45 646 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 UHRF2Q96PU4 802 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 MLXQ9UH92 298 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 YTHDF2Q9Y5A9 579 aaKnown RBP9.48□□□□□ -0.89
SHMT2-230ENST00000557427 DMRT1Q9Y5R6 373 aa9.48□□□□□ -0.89
SHMT2-230ENST00000557427 A0A0G2JLM5 398 aa9.47□□□□□ -0.89
SHMT2-230ENST00000557427 H3BUA1 57 aa9.47□□□□□ -0.89
SHMT2-230ENST00000557427 ZNF90Q03938 601 aa9.47□□□□□ -0.89
SHMT2-230ENST00000557427 ADIRFQ15847 76 aa9.47□□□□□ -0.89
SHMT2-230ENST00000557427 PATE2Q6UY27 113 aa9.47□□□□□ -0.89
SHMT2-230ENST00000557427 FAM24BQ8N5W8 94 aa9.47□□□□□ -0.89
SHMT2-230ENST00000557427 FAM167A-AS1Q96KT0 104 aa9.47□□□□□ -0.89
SHMT2-230ENST00000557427 SPATA25Q9BR10 227 aa9.47□□□□□ -0.89
SHMT2-230ENST00000557427 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
SHMT2-230ENST00000557427 A0A1W2PRE2 83 aa9.46□□□□□ -0.9
SHMT2-230ENST00000557427 A8MZ25 164 aa9.46□□□□□ -0.9
SHMT2-230ENST00000557427 C1orf196B1AJZ1 125 aa9.46□□□□□ -0.9
SHMT2-230ENST00000557427 OR7C2O60412 319 aa9.46□□□□□ -0.9
SHMT2-230ENST00000557427 NDUFB4O95168 129 aa9.46□□□□□ -0.9
SHMT2-230ENST00000557427 IGHV3-48P01763 117 aa9.46□□□□□ -0.9
SHMT2-230ENST00000557427 ELOBQ15370 118 aa9.46□□□□□ -0.9
SHMT2-230ENST00000557427 C19orf35Q6ZS72 473 aa9.46□□□□□ -0.9
SHMT2-230ENST00000557427 TTC9CQ8N5M4 171 aa9.46□□□□□ -0.9
SHMT2-230ENST00000557427 ANAPC16Q96DE5 110 aa9.46□□□□□ -0.9
SHMT2-230ENST00000557427 C9JCJ5 164 aa9.45□□□□□ -0.9
SHMT2-230ENST00000557427 K7EIM0 57 aa9.45□□□□□ -0.9
SHMT2-230ENST00000557427 FABP1P07148 127 aa9.45□□□□□ -0.9
SHMT2-230ENST00000557427 IGLC1P0CG04 106 aa9.45□□□□□ -0.9
SHMT2-230ENST00000557427 RAB5BP61020 215 aa9.45□□□□□ -0.9
SHMT2-230ENST00000557427 ATP5G2Q06055 141 aa9.45□□□□□ -0.9
SHMT2-230ENST00000557427 STXBP6Q8NFX7 210 aa9.45□□□□□ -0.9
SHMT2-230ENST00000557427 OR51G1Q8NGK1 321 aa9.45□□□□□ -0.9
SHMT2-230ENST00000557427 RETNQ9HD89 108 aa9.45□□□□□ -0.9
SHMT2-230ENST00000557427 PEF1Q9UBV8 284 aaKnown RBP9.45□□□□□ -0.9
SHMT2-230ENST00000557427 LY96Q9Y6Y9 160 aa9.45□□□□□ -0.9
SHMT2-230ENST00000557427 IGLV11-55A0A075B6I3 123 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 TRAV30A0A087WSZ9 112 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 SCO2A0A1W2PP80 73 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 TGOLN2O43493 480 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 HYPMO75409 117 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 TRBV12-3P01733 135 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 UBE2L3P68036 154 aaKnown RBP9.44□□□□□ -0.9
SHMT2-230ENST00000557427 RHOGP84095 191 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 MORN5Q5VZ52 161 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 LINC01551Q86U37 167 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 IL17DQ8TAD2 202 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 Q8WTZ3 238 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 USMG5Q96IX5 58 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 PAXXQ9BUH6 204 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 ELOVL1Q9BW60 279 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 OR51M1Q9H341 326 aa9.44□□□□□ -0.9
SHMT2-230ENST00000557427 TRBV24-1A0A075B6N3 115 aa9.43□□□□□ -0.9
SHMT2-230ENST00000557427 TRAV5A0A0B4J249 113 aa9.43□□□□□ -0.9
SHMT2-230ENST00000557427 PPP1R2P9O14990 202 aa9.43□□□□□ -0.9
SHMT2-230ENST00000557427 OR2J3O76001 311 aa9.43□□□□□ -0.9
SHMT2-230ENST00000557427 BRI3O95415 125 aa9.43□□□□□ -0.9
SHMT2-230ENST00000557427 SYNJ2BPP57105 145 aa9.43□□□□□ -0.9
SHMT2-230ENST00000557427 KLK9Q2XQG4 91 aa9.43□□□□□ -0.9
SHMT2-230ENST00000557427 ZNF343Q6P1L6 599 aa9.43□□□□□ -0.9
SHMT2-230ENST00000557427 LINC00305Q7Z4B0 112 aa9.43□□□□□ -0.9
SHMT2-230ENST00000557427 TCEAL7Q9BRU2 100 aa9.43□□□□□ -0.9
SHMT2-230ENST00000557427 KLK9Q9UKQ9 250 aa9.43□□□□□ -0.9
SHMT2-230ENST00000557427 IGHV3-21A0A0B4J1V1 117 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 H7BYZ3 331 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 CXCL1P09341 107 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 OR10J4P0C629 311 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 HIST1H1BP16401 226 aaKnown RBP9.42□□□□□ -0.9
SHMT2-230ENST00000557427 ORM2P19652 201 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 KLF5Q13887 457 aaPredicted RBP9.42□□□□□ -0.9
SHMT2-230ENST00000557427 TIGITQ495A1 244 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 OR1B1Q8NGR6 318 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 FXYD5Q96DB9 178 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 FANCD2OSQ96PS1 177 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 FAM110AQ9BQ89 295 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 PYGO2Q9BRQ0 406 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 DERL1Q9BUN8 251 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 KRTAP4-5Q9BYR2 181 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 BIN3Q9NQY0 253 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 THYN1Q9P016 225 aa9.42□□□□□ -0.9
SHMT2-230ENST00000557427 FBXL7Q9UJT9 491 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms