RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 OR4B1Q8NGF8 309 aa9.12□□□□□ -0.95
SLIRP-209ENST00000557342 C20orf173Q96LM9 149 aa9.12□□□□□ -0.95
SLIRP-209ENST00000557342 HYLS1Q96M11 299 aa9.12□□□□□ -0.95
SLIRP-209ENST00000557342 SLC50A1Q9BRV3 221 aa9.12□□□□□ -0.95
SLIRP-209ENST00000557342 TRAV8-2A0A0B4J237 113 aa9.11□□□□□ -0.95
SLIRP-209ENST00000557342 A0A0J9YX75 114 aa9.11□□□□□ -0.95
SLIRP-209ENST00000557342 BOLA2-SMG1P6H3BVE0 249 aa9.11□□□□□ -0.95
SLIRP-209ENST00000557342 DUSP14O95147 198 aaKnown RBP9.11□□□□□ -0.95
SLIRP-209ENST00000557342 GUK1Q16774 197 aa9.11□□□□□ -0.95
SLIRP-209ENST00000557342 MORN5Q5VZ52 161 aa9.11□□□□□ -0.95
SLIRP-209ENST00000557342 ZNF738Q8NE65 137 aa9.11□□□□□ -0.95
SLIRP-209ENST00000557342 PARD6GQ9BYG4 376 aaPredicted RBP9.11□□□□□ -0.95
SLIRP-209ENST00000557342 SMIM3Q9BZL3 60 aa9.11□□□□□ -0.95
SLIRP-209ENST00000557342 HRH4Q9H3N8 390 aa9.11□□□□□ -0.95
SLIRP-209ENST00000557342 CLEC5AQ9NY25 188 aa9.11□□□□□ -0.95
SLIRP-209ENST00000557342 STAB2Q8WWQ8 2551 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 HMSDA8MTL9 139 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 F6UB75 175 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 IGKV3-20P01619 116 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 IGLC2P0DOY2 106 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 DEFB1P60022 68 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 PSG9Q00887 426 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 PSG3Q16557 428 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 FAM78BQ5VT40 261 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 IGFL4Q6B9Z1 124 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 RNF182Q8N6D2 247 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 CSNK1G2-AS1Q8NCQ2 148 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 OR11H4Q8NGC9 324 aa9.1□□□□□ -0.95
SLIRP-209ENST00000557342 MRPL32Q9BYC8 188 aaKnown RBP9.1□□□□□ -0.95
SLIRP-209ENST00000557342 C11orf68Q9H3H3 251 aaKnown RBP9.1□□□□□ -0.95
SLIRP-209ENST00000557342 ZNF331Q9NQX6 463 aaPredicted RBP9.1□□□□□ -0.95
SLIRP-209ENST00000557342 NBEAL2Q6ZNJ1 2754 aa9.09□□□□□ -0.95
SLIRP-209ENST00000557342 FXYD6-FXYD2A0A087WZ82 144 aa9.09□□□□□ -0.95
SLIRP-209ENST00000557342 TRAV5A0A0B4J249 113 aa9.09□□□□□ -0.95
SLIRP-209ENST00000557342 ZNF705EA8MWA4 302 aaPredicted RBP9.09□□□□□ -0.95
SLIRP-209ENST00000557342 MIFP14174 115 aa9.09□□□□□ -0.95
SLIRP-209ENST00000557342 ZFAND6Q6FIF0 208 aa9.09□□□□□ -0.95
SLIRP-209ENST00000557342 AQP10Q96PS8 301 aa9.09□□□□□ -0.95
SLIRP-209ENST00000557342 TMEM14CQ9P0S9 112 aa9.09□□□□□ -0.95
SLIRP-209ENST00000557342 XCL2Q9UBD3 114 aa9.09□□□□□ -0.95
SLIRP-209ENST00000557342 TNFSF18Q9UNG2 199 aa9.09□□□□□ -0.95
SLIRP-209ENST00000557342 A8MTW9 85 aa9.08□□□□□ -0.96
SLIRP-209ENST00000557342 ZNF253O75346 499 aa9.08□□□□□ -0.96
SLIRP-209ENST00000557342 AMBPP02760 352 aa9.08□□□□□ -0.96
SLIRP-209ENST00000557342 HIST1H1EP10412 219 aaKnown RBP9.08□□□□□ -0.96
SLIRP-209ENST00000557342 ZNF266Q14584 549 aa9.08□□□□□ -0.96
SLIRP-209ENST00000557342 GCSAMLQ5JQS6 135 aa9.08□□□□□ -0.96
SLIRP-209ENST00000557342 INO80EQ8NBZ0 244 aaPredicted RBP9.08□□□□□ -0.96
SLIRP-209ENST00000557342 MFFQ9GZY8 342 aa9.08□□□□□ -0.96
SLIRP-209ENST00000557342 H3BQ15 152 aa9.07□□□□□ -0.96
SLIRP-209ENST00000557342 SNRPCP09234 159 aaKnown RBP9.07□□□□□ -0.96
SLIRP-209ENST00000557342 HLA-DMBP28068 263 aa9.07□□□□□ -0.96
SLIRP-209ENST00000557342 CNN1P51911 297 aaKnown RBP9.07□□□□□ -0.96
SLIRP-209ENST00000557342 FXYD7P58549 80 aa9.07□□□□□ -0.96
SLIRP-209ENST00000557342 ZNF345Q14585 488 aa9.07□□□□□ -0.96
SLIRP-209ENST00000557342 FFAR4Q5NUL3 377 aa9.07□□□□□ -0.96
SLIRP-209ENST00000557342 C9orf62Q8N4C0 152 aa9.07□□□□□ -0.96
SLIRP-209ENST00000557342 OR8A1Q8NGG7 326 aa9.07□□□□□ -0.96
SLIRP-209ENST00000557342 RPUSD4Q96CM3 377 aaKnown RBP9.07□□□□□ -0.96
SLIRP-209ENST00000557342 SAT2Q96F10 170 aaPredicted RBP9.07□□□□□ -0.96
SLIRP-209ENST00000557342 SLC35B3Q9H1N7 401 aa9.07□□□□□ -0.96
SLIRP-209ENST00000557342 WFDC1Q9HC57 220 aa9.07□□□□□ -0.96
SLIRP-209ENST00000557342 PPP1R14DQ9NXH3 145 aa9.07□□□□□ -0.96
SLIRP-209ENST00000557342 FUT9Q9Y231 359 aa9.07□□□□□ -0.96
SLIRP-209ENST00000557342 TIMM9Q9Y5J7 89 aa9.07□□□□□ -0.96
SLIRP-209ENST00000557342 RNF222A6NCQ9 220 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 SMIM9A6NGZ8 99 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 H3BTX0 84 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 SLC17A3O00476 420 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 ARPC5O15511 151 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 RHOBP62745 196 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 HIST1H1AQ02539 215 aaPredicted RBP9.06□□□□□ -0.96
SLIRP-209ENST00000557342 PDE6HQ13956 83 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 ACOT6Q3I5F7 207 aaPredicted RBP9.06□□□□□ -0.96
SLIRP-209ENST00000557342 MIR17HGQ75NE6 70 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 Q8NAQ8 132 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 SLC25A2Q9BXI2 301 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 OR51M1Q9H341 326 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 ZNF586Q9NXT0 402 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 GOLT1BQ9Y3E0 138 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 X6R8D5 127 aa9.06□□□□□ -0.96
SLIRP-209ENST00000557342 TRBV19A0A075B6N1 114 aa9.05□□□□□ -0.96
SLIRP-209ENST00000557342 ZNF705DP0CH99 300 aaPredicted RBP9.05□□□□□ -0.96
SLIRP-209ENST00000557342 ZNF705BP0CI00 300 aaPredicted RBP9.05□□□□□ -0.96
SLIRP-209ENST00000557342 PYYP10082 97 aa9.05□□□□□ -0.96
SLIRP-209ENST00000557342 NKX2-5P52952 324 aaPredicted RBP9.05□□□□□ -0.96
SLIRP-209ENST00000557342 TAS2R45P59539 299 aa9.05□□□□□ -0.96
SLIRP-209ENST00000557342 AMTNQ6UX39 209 aa9.05□□□□□ -0.96
SLIRP-209ENST00000557342 ZNF705AQ6ZN79 300 aaPredicted RBP9.05□□□□□ -0.96
SLIRP-209ENST00000557342 OR10J6PQ8NGY7 276 aa9.05□□□□□ -0.96
SLIRP-209ENST00000557342 C11orf45Q8TAV5 145 aa9.05□□□□□ -0.96
SLIRP-209ENST00000557342 MRPL53Q96EL3 112 aaKnown RBP9.05□□□□□ -0.96
SLIRP-209ENST00000557342 FAM167A-AS1Q96KT0 104 aa9.05□□□□□ -0.96
SLIRP-209ENST00000557342 NEU1Q99519 415 aa9.05□□□□□ -0.96
SLIRP-209ENST00000557342 PAXXQ9BUH6 204 aa9.05□□□□□ -0.96
SLIRP-209ENST00000557342 AAMDCQ9H7C9 122 aa9.05□□□□□ -0.96
SLIRP-209ENST00000557342 PRELID1Q9Y255 219 aa9.05□□□□□ -0.96
SLIRP-209ENST00000557342 IGHV4-28A0A0C4DH34 117 aa9.04□□□□□ -0.96
SLIRP-209ENST00000557342 A0A0D9SG52 128 aa9.04□□□□□ -0.96
SLIRP-209ENST00000557342 CXorf65A6NEN9 183 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms