RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 MFAP4P55083 255 aa17.73■□□□□ 0.43
RCCD1-208ENST00000557266 CCDC144NLQ6NUI1 221 aa17.73■□□□□ 0.43
RCCD1-208ENST00000557266 TTC9CQ8N5M4 171 aa17.73■□□□□ 0.43
RCCD1-208ENST00000557266 KIR3DL3Q8N743 410 aa17.73■□□□□ 0.43
RCCD1-208ENST00000557266 A0A1W2PPR1 153 aa17.72■□□□□ 0.43
RCCD1-208ENST00000557266 M0QZK8 103 aa17.72■□□□□ 0.43
RCCD1-208ENST00000557266 PSG3Q16557 428 aa17.72■□□□□ 0.43
RCCD1-208ENST00000557266 PSG8Q9UQ74 426 aa17.72■□□□□ 0.43
RCCD1-208ENST00000557266 ZFP30Q9Y2G7 519 aa17.72■□□□□ 0.43
RCCD1-208ENST00000557266 M0QZ24 198 aa17.72■□□□□ 0.43
RCCD1-208ENST00000557266 M0R3E3 92 aa17.72■□□□□ 0.43
RCCD1-208ENST00000557266 HAX1O00165 279 aa17.71■□□□□ 0.43
RCCD1-208ENST00000557266 C2orf70A6NJV1 201 aa17.71■□□□□ 0.42
RCCD1-208ENST00000557266 Q56UQ5 140 aa17.71■□□□□ 0.42
RCCD1-208ENST00000557266 ATOH7Q8N100 152 aa17.71■□□□□ 0.42
RCCD1-208ENST00000557266 C21orf62Q9NYP8 219 aa17.71■□□□□ 0.42
RCCD1-208ENST00000557266 LOC102724200A0A096LPH7 203 aaPredicted RBP17.7■□□□□ 0.42
RCCD1-208ENST00000557266 K7EQM0 130 aa17.7■□□□□ 0.42
RCCD1-208ENST00000557266 EBI3Q14213 229 aa17.7■□□□□ 0.42
RCCD1-208ENST00000557266 SH2D7A6NKC9 451 aaPredicted RBP17.69■□□□□ 0.42
RCCD1-208ENST00000557266 OOSP1A8MZH6 123 aa17.69■□□□□ 0.42
RCCD1-208ENST00000557266 CHEK1O14757 476 aa17.69■□□□□ 0.42
RCCD1-208ENST00000557266 NDUFB8O95169 186 aa17.69■□□□□ 0.42
RCCD1-208ENST00000557266 FAM120AOSQ5T036 256 aa17.69■□□□□ 0.42
RCCD1-208ENST00000557266 MINOS1Q5TGZ0 78 aa17.69■□□□□ 0.42
RCCD1-208ENST00000557266 MINOS1-NBL1R4GNA1 71 aa17.69■□□□□ 0.42
RCCD1-208ENST00000557266 NDUFS7O75251 213 aa17.69■□□□□ 0.42
RCCD1-208ENST00000557266 IGHV3-23P01764 117 aa17.69■□□□□ 0.42
RCCD1-208ENST00000557266 IGLC3P0DOY3 106 aa17.69■□□□□ 0.42
RCCD1-208ENST00000557266 CRIP1P50238 77 aa17.69■□□□□ 0.42
RCCD1-208ENST00000557266 PMCHL1Q16048 86 aa17.69■□□□□ 0.42
RCCD1-208ENST00000557266 BTF3P20290 206 aaKnown RBP17.68■□□□□ 0.42
RCCD1-208ENST00000557266 PDE6HQ13956 83 aa17.68■□□□□ 0.42
RCCD1-208ENST00000557266 MAJINQ3KP22 176 aa17.68■□□□□ 0.42
RCCD1-208ENST00000557266 NDFIP1Q9BT67 221 aa17.68■□□□□ 0.42
RCCD1-208ENST00000557266 CLEC5AQ9NY25 188 aa17.68■□□□□ 0.42
RCCD1-208ENST00000557266 EGR2P11161 476 aaPredicted RBP17.68■□□□□ 0.42
RCCD1-208ENST00000557266 FAM162BQ5T6X4 162 aa17.68■□□□□ 0.42
RCCD1-208ENST00000557266 SVEP1Q4LDE5 3571 aa17.68■□□□□ 0.42
RCCD1-208ENST00000557266 IGSF10Q6WRI0 2623 aa17.68■□□□□ 0.42
RCCD1-208ENST00000557266 TMEM11P17152 192 aa17.67■□□□□ 0.42
RCCD1-208ENST00000557266 SPATA12Q7Z6I5 190 aa17.67■□□□□ 0.42
RCCD1-208ENST00000557266 S100A7AQ86SG5 101 aa17.67■□□□□ 0.42
RCCD1-208ENST00000557266 SIRPDQ9H106 197 aa17.67■□□□□ 0.42
RCCD1-208ENST00000557266 UQCR10Q9UDW1 63 aa17.67■□□□□ 0.42
RCCD1-208ENST00000557266 IGHV7-81A0A0B4J1V7 117 aa17.66■□□□□ 0.42
RCCD1-208ENST00000557266 ARMS2P0C7Q2 107 aa17.66■□□□□ 0.42
RCCD1-208ENST00000557266 CHCHD1Q96BP2 118 aaKnown RBP17.66■□□□□ 0.42
RCCD1-208ENST00000557266 CACNA1BQ00975 2339 aa17.66■□□□□ 0.42
RCCD1-208ENST00000557266 A0A1B0GUT8 65 aa17.66■□□□□ 0.42
RCCD1-208ENST00000557266 OR2T8A6NH00 312 aa17.66■□□□□ 0.42
RCCD1-208ENST00000557266 RPLP1P05386 114 aaKnown RBP17.66■□□□□ 0.42
RCCD1-208ENST00000557266 THYN1Q9P016 225 aa17.66■□□□□ 0.42
RCCD1-208ENST00000557266 IGHV1-24A0A0C4DH33 117 aa17.65■□□□□ 0.42
RCCD1-208ENST00000557266 C8orf49Q96NF6 230 aa17.65■□□□□ 0.42
RCCD1-208ENST00000557266 AAMDCQ9H7C9 122 aa17.65■□□□□ 0.42
RCCD1-208ENST00000557266 HIVEP3Q5T1R4 2406 aa17.65■□□□□ 0.42
RCCD1-208ENST00000557266 C1RLQ9NZP8 487 aa17.65■□□□□ 0.42
RCCD1-208ENST00000557266 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.64■□□□□ 0.41
RCCD1-208ENST00000557266 CTSGP08311 255 aa17.64■□□□□ 0.41
RCCD1-208ENST00000557266 Q8N9W7 124 aa17.64■□□□□ 0.41
RCCD1-208ENST00000557266 ASH1LQ9NR48 2969 aaKnown RBP17.63■□□□□ 0.41
RCCD1-208ENST00000557266 BATFQ16520 125 aa17.63■□□□□ 0.41
RCCD1-208ENST00000557266 LINC00614P0C842 121 aa17.63■□□□□ 0.41
RCCD1-208ENST00000557266 KLHDC1Q8N7A1 406 aa17.63■□□□□ 0.41
RCCD1-208ENST00000557266 TMEM70Q9BUB7 260 aa17.63■□□□□ 0.41
RCCD1-208ENST00000557266 TRAV9-2A0A087WT02 112 aa17.62■□□□□ 0.41
RCCD1-208ENST00000557266 RIGQ13278 110 aa17.62■□□□□ 0.41
RCCD1-208ENST00000557266 Q6ZN92 141 aa17.62■□□□□ 0.41
RCCD1-208ENST00000557266 LINC00173Q6ZV60 143 aa17.62■□□□□ 0.41
RCCD1-208ENST00000557266 GATD1Q8NB37 220 aa17.62■□□□□ 0.41
RCCD1-208ENST00000557266 AJUBAQ96IF1 538 aa17.62■□□□□ 0.41
RCCD1-208ENST00000557266 TXN2Q99757 166 aa17.62■□□□□ 0.41
RCCD1-208ENST00000557266 SPTBN1Q01082 2364 aaKnown RBP17.62■□□□□ 0.41
RCCD1-208ENST00000557266 G0S2P27469 103 aa17.62■□□□□ 0.41
RCCD1-208ENST00000557266 IGHV2-70DA0A0C4DH43 119 aa17.61■□□□□ 0.41
RCCD1-208ENST00000557266 RPL7P18124 248 aaKnown RBP17.61■□□□□ 0.41
RCCD1-208ENST00000557266 CSN1S1P47710 185 aa17.61■□□□□ 0.41
RCCD1-208ENST00000557266 ZNF138P52744 262 aa17.61■□□□□ 0.41
RCCD1-208ENST00000557266 PSG9Q00887 426 aa17.61■□□□□ 0.41
RCCD1-208ENST00000557266 CFAP46Q8IYW2 2715 aa17.6■□□□□ 0.41
RCCD1-208ENST00000557266 IGKV2-40A0A087WW87 121 aaPredicted RBP17.6■□□□□ 0.41
RCCD1-208ENST00000557266 CRXO43186 299 aaPredicted RBP17.6■□□□□ 0.41
RCCD1-208ENST00000557266 IGKV2D-40P01614 121 aaPredicted RBP17.6■□□□□ 0.41
RCCD1-208ENST00000557266 CT45A10P0DMU9 189 aa17.6■□□□□ 0.41
RCCD1-208ENST00000557266 UBTD1Q9HAC8 227 aa17.6■□□□□ 0.41
RCCD1-208ENST00000557266 WNK2Q9Y3S1 2297 aa17.6■□□□□ 0.41
RCCD1-208ENST00000557266 SERTM2A0A1B0GWG4 89 aa17.6■□□□□ 0.41
RCCD1-208ENST00000557266 FAM106CPP0CH98 169 aa17.6■□□□□ 0.41
RCCD1-208ENST00000557266 UQCRFS1P47985 274 aa17.6■□□□□ 0.41
RCCD1-208ENST00000557266 Q6AWC8 147 aa17.6■□□□□ 0.41
RCCD1-208ENST00000557266 TPPP3Q9BW30 176 aa17.6■□□□□ 0.41
RCCD1-208ENST00000557266 SMAD5-AS1Q9Y6J3 95 aa17.6■□□□□ 0.41
RCCD1-208ENST00000557266 MED13LQ71F56 2210 aa17.6■□□□□ 0.41
RCCD1-208ENST00000557266 HNRNPA3P51991 378 aaKnown RBP17.59■□□□□ 0.41
RCCD1-208ENST00000557266 LPAR2Q9HBW0 351 aa17.59■□□□□ 0.41
RCCD1-208ENST00000557266 RABAC1Q9UI14 185 aa17.59■□□□□ 0.41
RCCD1-208ENST00000557266 A0A1B0GW15 77 aa17.59■□□□□ 0.41
RCCD1-208ENST00000557266 LEPROTL1O95214 131 aa17.59■□□□□ 0.41
RCCD1-208ENST00000557266 ZNF25P17030 456 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms