RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MED14OSP0DP75 135 aa11.21□□□□□ -0.61
TUBB3-213ENST00000557262 ANXA7P20073 488 aaKnown RBP11.21□□□□□ -0.61
TUBB3-213ENST00000557262 AZU1P20160 251 aa11.21□□□□□ -0.61
TUBB3-213ENST00000557262 HIST1H1AQ02539 215 aaPredicted RBP11.21□□□□□ -0.61
TUBB3-213ENST00000557262 IAH1Q2TAA2 248 aaPredicted RBP11.21□□□□□ -0.61
TUBB3-213ENST00000557262 SOHLH1Q5JUK2 328 aa11.21□□□□□ -0.61
TUBB3-213ENST00000557262 PXDC1Q5TGL8 231 aa11.21□□□□□ -0.61
TUBB3-213ENST00000557262 LINC01587Q99440 93 aa11.21□□□□□ -0.61
TUBB3-213ENST00000557262 ARV1Q9H2C2 271 aa11.21□□□□□ -0.61
TUBB3-213ENST00000557262 MGAT4CQ9UBM8 478 aa11.21□□□□□ -0.61
TUBB3-213ENST00000557262 DYNC1H1Q14204 4646 aaKnown RBP11.2□□□□□ -0.62
TUBB3-213ENST00000557262 GOSR2O14653 212 aa11.2□□□□□ -0.62
TUBB3-213ENST00000557262 TSC22D2O75157 780 aa11.2□□□□□ -0.62
TUBB3-213ENST00000557262 SCGB1D2O95969 90 aa11.2□□□□□ -0.62
TUBB3-213ENST00000557262 FAM3BP58499 235 aaPredicted RBP11.2□□□□□ -0.62
TUBB3-213ENST00000557262 TMEM256Q8N2U0 113 aa11.2□□□□□ -0.62
TUBB3-213ENST00000557262 GSKIPQ9P0R6 139 aa11.2□□□□□ -0.62
TUBB3-213ENST00000557262 PLAC8L1A1L4L8 177 aa11.19□□□□□ -0.62
TUBB3-213ENST00000557262 MRPS12O15235 138 aaKnown RBP11.19□□□□□ -0.62
TUBB3-213ENST00000557262 TAS2R60P59551 318 aa11.19□□□□□ -0.62
TUBB3-213ENST00000557262 FCN2Q15485 313 aa11.19□□□□□ -0.62
TUBB3-213ENST00000557262 CNPY1Q3B7I2 92 aa11.19□□□□□ -0.62
TUBB3-213ENST00000557262 C1orf134Q5TEV5 83 aa11.19□□□□□ -0.62
TUBB3-213ENST00000557262 ZBTB8BQ8NAP8 495 aaPredicted RBP11.19□□□□□ -0.62
TUBB3-213ENST00000557262 RPUSD4Q96CM3 377 aaKnown RBP11.19□□□□□ -0.62
TUBB3-213ENST00000557262 SDHCQ99643 169 aaPredicted RBP11.19□□□□□ -0.62
TUBB3-213ENST00000557262 GGACTQ9BVM4 153 aa11.19□□□□□ -0.62
TUBB3-213ENST00000557262 PKD1P98161 4303 aa11.18□□□□□ -0.62
TUBB3-213ENST00000557262 CBY3A6NI87 242 aa11.18□□□□□ -0.62
TUBB3-213ENST00000557262 F5H768 121 aa11.18□□□□□ -0.62
TUBB3-213ENST00000557262 AGPAT2O15120 278 aa11.18□□□□□ -0.62
TUBB3-213ENST00000557262 BTCP35070 178 aa11.18□□□□□ -0.62
TUBB3-213ENST00000557262 SLC38A11Q08AI6 406 aa11.18□□□□□ -0.62
TUBB3-213ENST00000557262 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
TUBB3-213ENST00000557262 MITD1Q8WV92 249 aa11.18□□□□□ -0.62
TUBB3-213ENST00000557262 ATG101Q9BSB4 218 aa11.18□□□□□ -0.62
TUBB3-213ENST00000557262 C7orf66A4D0T2 115 aa11.17□□□□□ -0.62
TUBB3-213ENST00000557262 MBPP02686 304 aaPredicted RBP11.17□□□□□ -0.62
TUBB3-213ENST00000557262 ATP5G1P05496 136 aa11.17□□□□□ -0.62
TUBB3-213ENST00000557262 HTN1P15515 57 aa11.17□□□□□ -0.62
TUBB3-213ENST00000557262 CXCL2P19875 107 aa11.17□□□□□ -0.62
TUBB3-213ENST00000557262 CDKN1BP46527 198 aa11.17□□□□□ -0.62
TUBB3-213ENST00000557262 ATP5G3P48201 142 aa11.17□□□□□ -0.62
TUBB3-213ENST00000557262 ARL16Q0P5N6 197 aa11.17□□□□□ -0.62
TUBB3-213ENST00000557262 LCN15Q6UWW0 184 aa11.17□□□□□ -0.62
TUBB3-213ENST00000557262 ZNF546Q86UE3 836 aa11.17□□□□□ -0.62
TUBB3-213ENST00000557262 SLC50A1Q9BRV3 221 aa11.17□□□□□ -0.62
TUBB3-213ENST00000557262 ZNF331Q9NQX6 463 aaPredicted RBP11.17□□□□□ -0.62
TUBB3-213ENST00000557262 RCL1Q9Y2P8 373 aaKnown RBP11.17□□□□□ -0.62
TUBB3-213ENST00000557262 TIMM8BQ9Y5J9 83 aaPredicted RBP11.17□□□□□ -0.62
TUBB3-213ENST00000557262 DNAH11Q96DT5 4516 aa11.17□□□□□ -0.62
TUBB3-213ENST00000557262 RYR1P21817 5038 aa11.16□□□□□ -0.62
TUBB3-213ENST00000557262 PRB4P10163 310 aaPredicted RBP11.16□□□□□ -0.62
TUBB3-213ENST00000557262 ZNF493Q6ZR52 646 aa11.16□□□□□ -0.62
TUBB3-213ENST00000557262 BPIFA4PQ86YQ2 179 aa11.16□□□□□ -0.62
TUBB3-213ENST00000557262 C16orf74Q96GX8 76 aa11.16□□□□□ -0.62
TUBB3-213ENST00000557262 NACAE9PAV3 2078 aa11.15□□□□□ -0.62
TUBB3-213ENST00000557262 COX7A2P2O60397 106 aa11.15□□□□□ -0.62
TUBB3-213ENST00000557262 NUDT3O95989 172 aa11.15□□□□□ -0.62
TUBB3-213ENST00000557262 SNRPCP09234 159 aaKnown RBP11.15□□□□□ -0.62
TUBB3-213ENST00000557262 IL7P13232 177 aa11.15□□□□□ -0.62
TUBB3-213ENST00000557262 TMEM37Q8WXS4 190 aa11.15□□□□□ -0.62
TUBB3-213ENST00000557262 C20orf144Q9BQM9 153 aa11.15□□□□□ -0.62
TUBB3-213ENST00000557262 H7BYZ3 331 aa11.14□□□□□ -0.63
TUBB3-213ENST00000557262 L7N2F9 121 aa11.14□□□□□ -0.63
TUBB3-213ENST00000557262 VAMP2P63027 116 aa11.14□□□□□ -0.63
TUBB3-213ENST00000557262 ZNF846Q147U1 533 aa11.14□□□□□ -0.63
TUBB3-213ENST00000557262 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
TUBB3-213ENST00000557262 MGST2Q99735 147 aa11.14□□□□□ -0.63
TUBB3-213ENST00000557262 DNAJC4Q9NNZ3 241 aa11.14□□□□□ -0.63
TUBB3-213ENST00000557262 NOP10Q9NPE3 64 aaKnown RBP11.14□□□□□ -0.63
TUBB3-213ENST00000557262 CCL18P55774 89 aa11.13□□□□□ -0.63
TUBB3-213ENST00000557262 RAB31Q13636 194 aa11.13□□□□□ -0.63
TUBB3-213ENST00000557262 Q6ZRG5 221 aa11.13□□□□□ -0.63
TUBB3-213ENST00000557262 OR10J6PQ8NGY7 276 aa11.13□□□□□ -0.63
TUBB3-213ENST00000557262 ZNRF2Q8NHG8 242 aa11.13□□□□□ -0.63
TUBB3-213ENST00000557262 RNASE8Q8TDE3 154 aaKnown RBP11.13□□□□□ -0.63
TUBB3-213ENST00000557262 TMEM263Q8WUH6 116 aaKnown RBP11.13□□□□□ -0.63
TUBB3-213ENST00000557262 PXMP4Q9Y6I8 212 aa11.13□□□□□ -0.63
TUBB3-213ENST00000557262 MUC4Q99102 2169 aa11.12□□□□□ -0.63
TUBB3-213ENST00000557262 PRAC2D3DTV9 90 aa11.12□□□□□ -0.63
TUBB3-213ENST00000557262 CCSO14618 274 aa11.12□□□□□ -0.63
TUBB3-213ENST00000557262 PLA2G10O15496 165 aa11.12□□□□□ -0.63
TUBB3-213ENST00000557262 CAMLGP49069 296 aa11.12□□□□□ -0.63
TUBB3-213ENST00000557262 BCAP31P51572 246 aa11.12□□□□□ -0.63
TUBB3-213ENST00000557262 KIR3DS1Q14943 382 aa11.12□□□□□ -0.63
TUBB3-213ENST00000557262 OPCMLQ14982 345 aa11.12□□□□□ -0.63
TUBB3-213ENST00000557262 MORN5Q5VZ52 161 aa11.12□□□□□ -0.63
TUBB3-213ENST00000557262 CCDC28AQ8IWP9 274 aa11.12□□□□□ -0.63
TUBB3-213ENST00000557262 SAT2Q96F10 170 aaPredicted RBP11.12□□□□□ -0.63
TUBB3-213ENST00000557262 C20orf85Q9H1P6 137 aa11.12□□□□□ -0.63
TUBB3-213ENST00000557262 LSM5Q9Y4Y9 91 aaKnown RBP11.12□□□□□ -0.63
TUBB3-213ENST00000557262 NBDYA0A0U1RRE5 68 aa11.11□□□□□ -0.63
TUBB3-213ENST00000557262 FAM25EA8MYX2 175 aa11.11□□□□□ -0.63
TUBB3-213ENST00000557262 H3BQ15 152 aa11.11□□□□□ -0.63
TUBB3-213ENST00000557262 H3BTX0 84 aa11.11□□□□□ -0.63
TUBB3-213ENST00000557262 SLC17A3O00476 420 aa11.11□□□□□ -0.63
TUBB3-213ENST00000557262 LYRM1O43325 122 aa11.11□□□□□ -0.63
TUBB3-213ENST00000557262 TCRBP04435 133 aa11.11□□□□□ -0.63
TUBB3-213ENST00000557262 IGLC2P0DOY2 106 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms