RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 RBMY1A1P0DJD3 496 aaKnown RBP8.64□□□□□ -1.03
SYNE2-226ENST00000557084 RBMY1CP0DJD4 496 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 FGF7P21781 194 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 IL15RAQ13261 267 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 RBMY1FQ15415 496 aaKnown RBP8.64□□□□□ -1.03
SYNE2-226ENST00000557084 BPIFA4PQ86YQ2 179 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 OR1L4Q8NGR5 311 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 C2CD4CQ8TF44 421 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 TMEM208Q9BTX3 173 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 NMES1Q9C002 83 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 SLC35B3Q9H1N7 401 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 HRH4Q9H3N8 390 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 C11orf1Q9H5F2 150 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 DNAJC4Q9NNZ3 241 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 WDR83OSQ9Y284 106 aa8.64□□□□□ -1.03
SYNE2-226ENST00000557084 A0A087X0K7 114 aa8.63□□□□□ -1.03
SYNE2-226ENST00000557084 TRAV8-2A0A0B4J237 113 aa8.63□□□□□ -1.03
SYNE2-226ENST00000557084 C11orf94C9JXX5 98 aa8.63□□□□□ -1.03
SYNE2-226ENST00000557084 HLA-DMBP28068 263 aa8.63□□□□□ -1.03
SYNE2-226ENST00000557084 EMP1P54849 157 aa8.63□□□□□ -1.03
SYNE2-226ENST00000557084 RHOBP62745 196 aa8.63□□□□□ -1.03
SYNE2-226ENST00000557084 MIC13Q5XKP0 118 aa8.63□□□□□ -1.03
SYNE2-226ENST00000557084 PFDN5Q99471 154 aa8.63□□□□□ -1.03
SYNE2-226ENST00000557084 MARVELD1Q9BSK0 173 aa8.63□□□□□ -1.03
SYNE2-226ENST00000557084 TMEM189A5PLL7 270 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 SMIM9A6NGZ8 99 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 MPDU1O75352 247 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 AMBPP02760 352 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 SNRPCP09234 159 aaKnown RBP8.62□□□□□ -1.03
SYNE2-226ENST00000557084 ZNF705DP0CH99 300 aaPredicted RBP8.62□□□□□ -1.03
SYNE2-226ENST00000557084 ZNF705BP0CI00 300 aaPredicted RBP8.62□□□□□ -1.03
SYNE2-226ENST00000557084 PET100P0DJ07 73 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 CXCL2P19875 107 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 CXCL3P19876 107 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 RPL29P47914 159 aaKnown RBP8.62□□□□□ -1.03
SYNE2-226ENST00000557084 CNN1P51911 297 aaKnown RBP8.62□□□□□ -1.03
SYNE2-226ENST00000557084 B2MP61769 119 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 HIST1H1AQ02539 215 aaPredicted RBP8.62□□□□□ -1.03
SYNE2-226ENST00000557084 PSG3Q16557 428 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 VWC2Q2TAL6 325 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 LCN15Q6UWW0 184 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 ZNF705AQ6ZN79 300 aaPredicted RBP8.62□□□□□ -1.03
SYNE2-226ENST00000557084 ZNF709Q8N972 641 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 TMEM37Q8WXS4 190 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 LINC00476Q8WZB0 136 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 C17orf77Q96MU5 243 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 SLC39A9Q9NUM3 307 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 RFNGQ9Y644 331 aa8.62□□□□□ -1.03
SYNE2-226ENST00000557084 TRAV10A0A0B4J240 114 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 IGLL5B9A064 214 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 INSP01308 110 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 HBE1P02100 147 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 NHLH2Q02577 135 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 CLINT1Q14677 625 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 OPCMLQ14982 345 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 OR5C1Q8NGR4 320 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 THAP6Q8TBB0 222 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 RPUSD4Q96CM3 377 aaKnown RBP8.61□□□□□ -1.03
SYNE2-226ENST00000557084 NEU1Q99519 415 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 SLC50A1Q9BRV3 221 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 OR5AC2Q9NZP5 309 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 PXMP4Q9Y6I8 212 aa8.61□□□□□ -1.03
SYNE2-226ENST00000557084 ZNF705FA8MVS1 300 aaPredicted RBP8.6□□□□□ -1.03
SYNE2-226ENST00000557084 H3BTX0 84 aa8.6□□□□□ -1.03
SYNE2-226ENST00000557084 M0R2Z0 102 aa8.6□□□□□ -1.03
SYNE2-226ENST00000557084 SPART-AS1P0CW21 52 aa8.6□□□□□ -1.03
SYNE2-226ENST00000557084 SPINK13Q1W4C9 94 aa8.6□□□□□ -1.03
SYNE2-226ENST00000557084 Q6ZTC4 211 aa8.6□□□□□ -1.03
SYNE2-226ENST00000557084 OR8A1Q8NGG7 326 aa8.6□□□□□ -1.03
SYNE2-226ENST00000557084 PPP1R1CQ8WVI7 109 aa8.6□□□□□ -1.03
SYNE2-226ENST00000557084 IGF2BP2-AS1Q96M15 143 aa8.6□□□□□ -1.03
SYNE2-226ENST00000557084 KCNIP2Q9NS61 270 aa8.6□□□□□ -1.03
SYNE2-226ENST00000557084 ALMS1Q8TCU4 4167 aa8.6□□□□□ -1.03
SYNE2-226ENST00000557084 HYDINQ4G0P3 5121 aa8.6□□□□□ -1.03
SYNE2-226ENST00000557084 DNAH1Q9P2D7 4330 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 TRAV5A0A0B4J249 113 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 TEX48A0A1B0GUV7 120 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 H2BFSP57053 126 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 TCTAP57738 103 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 GUK1Q16774 197 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 RRN3P1Q2M238 152 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 MORN5Q5VZ52 161 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 ZNF767PQ75MW2 155 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 OR11H7Q8NGC8 314 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 OR10J6PQ8NGY7 276 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 CHAC2Q8WUX2 184 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 NPCDR1Q9BY65 106 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 ZNF331Q9NQX6 463 aaPredicted RBP8.59□□□□□ -1.03
SYNE2-226ENST00000557084 CELA1Q9UNI1 258 aa8.59□□□□□ -1.03
SYNE2-226ENST00000557084 DEFB131BA0A096LNP1 70 aa8.58□□□□□ -1.04
SYNE2-226ENST00000557084 LOC102723971A0A1B0GUV8 181 aa8.58□□□□□ -1.04
SYNE2-226ENST00000557084 C17orf112F2Z3M2 114 aa8.58□□□□□ -1.04
SYNE2-226ENST00000557084 BOLA2-SMG1P6H3BVE0 249 aa8.58□□□□□ -1.04
SYNE2-226ENST00000557084 MRPS12O15235 138 aaKnown RBP8.58□□□□□ -1.04
SYNE2-226ENST00000557084 MPC2O95563 127 aa8.58□□□□□ -1.04
SYNE2-226ENST00000557084 AMTNQ6UX39 209 aa8.58□□□□□ -1.04
SYNE2-226ENST00000557084 TIMM9Q9Y5J7 89 aa8.58□□□□□ -1.04
SYNE2-226ENST00000557084 TRAV12-2A0A075B6T6 113 aa8.57□□□□□ -1.04
SYNE2-226ENST00000557084 A8MTW9 85 aa8.57□□□□□ -1.04
SYNE2-226ENST00000557084 H0YIZ8 118 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms