RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 DYNLRB1Q9NP97 96 aa9.01□□□□□ -0.97
SRP54-213ENST00000556994 NGBQ9NPG2 151 aa9.01□□□□□ -0.97
SRP54-213ENST00000556994 PSG8Q9UQ74 426 aa9.01□□□□□ -0.97
SRP54-213ENST00000556994 TRBV19A0A075B6N1 114 aa9□□□□□ -0.97
SRP54-213ENST00000556994 HOXB4P17483 251 aaPredicted RBP9□□□□□ -0.97
SRP54-213ENST00000556994 GPR183P32249 361 aa9□□□□□ -0.97
SRP54-213ENST00000556994 PSG9Q00887 426 aa9□□□□□ -0.97
SRP54-213ENST00000556994 RIGQ13278 110 aa9□□□□□ -0.97
SRP54-213ENST00000556994 IGFL3Q6UXB1 125 aa9□□□□□ -0.97
SRP54-213ENST00000556994 FA2HQ7L5A8 372 aa9□□□□□ -0.97
SRP54-213ENST00000556994 ASCL5Q7RTU5 278 aa9□□□□□ -0.97
SRP54-213ENST00000556994 TMEM14CQ9P0S9 112 aa9□□□□□ -0.97
SRP54-213ENST00000556994 ACACAQ13085 2346 aa9□□□□□ -0.97
SRP54-213ENST00000556994 TRAV8-6A0A0B4J262 113 aa9□□□□□ -0.97
SRP54-213ENST00000556994 CNIH1O95406 144 aa9□□□□□ -0.97
SRP54-213ENST00000556994 HIST1H1AQ02539 215 aaPredicted RBP9□□□□□ -0.97
SRP54-213ENST00000556994 KLF17Q5JT82 389 aaPredicted RBP9□□□□□ -0.97
SRP54-213ENST00000556994 C2orf91Q6ZV80 131 aa9□□□□□ -0.97
SRP54-213ENST00000556994 BPIFA4PQ86YQ2 179 aa9□□□□□ -0.97
SRP54-213ENST00000556994 MS4A6AQ9H2W1 248 aa9□□□□□ -0.97
SRP54-213ENST00000556994 CST9LQ9H4G1 147 aa9□□□□□ -0.97
SRP54-213ENST00000556994 TMEM213A2RRL7 107 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 BUB1B-PAK6H3BSN5 160 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 IGLV1-47P01700 117 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 FCGR2BP31994 310 aaPredicted RBP8.99□□□□□ -0.97
SRP54-213ENST00000556994 UQCRFS1P47985 274 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 RBPJQ06330 500 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 SIGLEC15Q6ZMC9 328 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 ARHGAP32A7KAX9 2087 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 D6R8Y8 96 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 IL4P05112 153 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 COX8AP10176 69 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 PSG3Q16557 428 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 OR10AG1Q8NH19 301 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 SCNM1Q9BWG6 230 aa8.99□□□□□ -0.97
SRP54-213ENST00000556994 A0A096LNJ9 63 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 E7EQL1 145 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 K7EIM0 57 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 CD5LO43866 347 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 ANKRD39Q53RE8 183 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 LYZL1Q6UWQ5 148 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 AMN1Q8IY45 258 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 PIP4P2Q8N4L2 257 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 TMEM75Q8N9X5 138 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 RPEQ96AT9 228 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 SHANK2-AS3Q9BTD1 123 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 KAAG1Q9UBP8 84 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 CSN1S1P47710 185 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 OCIAD2Q56VL3 154 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 SAPCD1Q5SSQ6 148 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 ZNF491Q8N8L2 437 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 SIGLEC8Q9NYZ4 499 aa8.98□□□□□ -0.97
SRP54-213ENST00000556994 RALYQ9UKM9 306 aaKnown RBP8.98□□□□□ -0.97
SRP54-213ENST00000556994 C7orf71A4D174 169 aa8.97□□□□□ -0.97
SRP54-213ENST00000556994 H3BRN7 92 aa8.97□□□□□ -0.97
SRP54-213ENST00000556994 ZNF414Q96IQ9 312 aa8.97□□□□□ -0.97
SRP54-213ENST00000556994 NAA38Q9BRA0 125 aaKnown RBP8.97□□□□□ -0.97
SRP54-213ENST00000556994 VPS25Q9BRG1 176 aa8.97□□□□□ -0.97
SRP54-213ENST00000556994 SPTBN2O15020 2390 aa8.97□□□□□ -0.97
SRP54-213ENST00000556994 GAGE12BA1L429 117 aa8.97□□□□□ -0.97
SRP54-213ENST00000556994 SMKR1H3BMG3 65 aa8.97□□□□□ -0.97
SRP54-213ENST00000556994 K7EQM0 130 aa8.97□□□□□ -0.97
SRP54-213ENST00000556994 NHLH1Q02575 133 aa8.97□□□□□ -0.97
SRP54-213ENST00000556994 WFDC3Q8IUB2 231 aa8.97□□□□□ -0.97
SRP54-213ENST00000556994 RNF125Q96EQ8 232 aa8.97□□□□□ -0.97
SRP54-213ENST00000556994 SHISA9B4DS77 424 aa8.96□□□□□ -0.97
SRP54-213ENST00000556994 PRRG2O14669 202 aa8.96□□□□□ -0.97
SRP54-213ENST00000556994 TMEM97Q5BJF2 176 aa8.96□□□□□ -0.97
SRP54-213ENST00000556994 PPIAL4CA0A0B4J2A2 164 aa8.96□□□□□ -0.98
SRP54-213ENST00000556994 TIMM23O14925 209 aa8.96□□□□□ -0.98
SRP54-213ENST00000556994 MRPS12O15235 138 aaKnown RBP8.96□□□□□ -0.98
SRP54-213ENST00000556994 CT45A10P0DMU9 189 aa8.96□□□□□ -0.98
SRP54-213ENST00000556994 PPIAL4GP0DN37 164 aa8.96□□□□□ -0.98
SRP54-213ENST00000556994 CACNG7P62955 275 aa8.96□□□□□ -0.98
SRP54-213ENST00000556994 PAX2Q02962 417 aa8.96□□□□□ -0.98
SRP54-213ENST00000556994 PRELID3AQ96N28 172 aa8.96□□□□□ -0.98
SRP54-213ENST00000556994 RABAC1Q9UI14 185 aa8.96□□□□□ -0.98
SRP54-213ENST00000556994 HILPDAQ9Y5L2 63 aa8.96□□□□□ -0.98
SRP54-213ENST00000556994 RIF1Q5UIP0 2472 aaKnown RBP8.95□□□□□ -0.98
SRP54-213ENST00000556994 IGKV2-40A0A087WW87 121 aaPredicted RBP8.95□□□□□ -0.98
SRP54-213ENST00000556994 TRBV6-1A0A0K0K1D8 114 aa8.95□□□□□ -0.98
SRP54-213ENST00000556994 TMEM189A5PLL7 270 aa8.95□□□□□ -0.98
SRP54-213ENST00000556994 VSTM5A8MXK1 200 aa8.95□□□□□ -0.98
SRP54-213ENST00000556994 IGKV2D-40P01614 121 aaPredicted RBP8.95□□□□□ -0.98
SRP54-213ENST00000556994 FGF6P10767 208 aa8.95□□□□□ -0.98
SRP54-213ENST00000556994 IGFL4Q6B9Z1 124 aa8.95□□□□□ -0.98
SRP54-213ENST00000556994 TNFRSF14Q92956 283 aa8.95□□□□□ -0.98
SRP54-213ENST00000556994 ASH1LQ9NR48 2969 aaKnown RBP8.95□□□□□ -0.98
SRP54-213ENST00000556994 PEF1Q9UBV8 284 aaKnown RBP8.95□□□□□ -0.98
SRP54-213ENST00000556994 SH2D1AO60880 128 aa8.94□□□□□ -0.98
SRP54-213ENST00000556994 IGHV3-23P01764 117 aa8.94□□□□□ -0.98
SRP54-213ENST00000556994 FAM104BQ5XKR9 115 aa8.94□□□□□ -0.98
SRP54-213ENST00000556994 PRSS57Q6UWY2 283 aa8.94□□□□□ -0.98
SRP54-213ENST00000556994 GATD1Q8NB37 220 aa8.94□□□□□ -0.98
SRP54-213ENST00000556994 ONECUT1Q9UBC0 465 aa8.94□□□□□ -0.98
SRP54-213ENST00000556994 ABCA4P78363 2273 aa8.94□□□□□ -0.98
SRP54-213ENST00000556994 COTL1Q14019 142 aa8.94□□□□□ -0.98
SRP54-213ENST00000556994 MRPL51Q4U2R6 128 aaKnown RBP8.94□□□□□ -0.98
SRP54-213ENST00000556994 ZNF493Q6ZR52 646 aa8.94□□□□□ -0.98
SRP54-213ENST00000556994 GNG7O60262 68 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms