RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 CST7O76096 145 aa16.19■□□□□ 0.18
TMEM260-214ENST00000556975 CXCL2P19875 107 aa16.19■□□□□ 0.18
TMEM260-214ENST00000556975 EMP1P54849 157 aa16.19■□□□□ 0.18
TMEM260-214ENST00000556975 PSG3Q16557 428 aa16.19■□□□□ 0.18
TMEM260-214ENST00000556975 RRN3P1Q2M238 152 aa16.19■□□□□ 0.18
TMEM260-214ENST00000556975 ZNF738Q8NE65 137 aa16.19■□□□□ 0.18
TMEM260-214ENST00000556975 DNAH6Q9C0G6 4158 aa16.19■□□□□ 0.18
TMEM260-214ENST00000556975 A6NHS1 94 aa16.18■□□□□ 0.18
TMEM260-214ENST00000556975 CAMLGP49069 296 aa16.18■□□□□ 0.18
TMEM260-214ENST00000556975 RAB31Q13636 194 aa16.18■□□□□ 0.18
TMEM260-214ENST00000556975 OXA1LQ15070 435 aa16.18■□□□□ 0.18
TMEM260-214ENST00000556975 VWC2Q2TAL6 325 aa16.18■□□□□ 0.18
TMEM260-214ENST00000556975 OR8A1Q8NGG7 326 aa16.18■□□□□ 0.18
TMEM260-214ENST00000556975 LRRC20Q8TCA0 184 aa16.18■□□□□ 0.18
TMEM260-214ENST00000556975 LYRM2Q9NU23 88 aaPredicted RBP16.18■□□□□ 0.18
TMEM260-214ENST00000556975 WDR83OSQ9Y284 106 aa16.18■□□□□ 0.18
TMEM260-214ENST00000556975 LOC102723971A0A1B0GUV8 181 aa16.17■□□□□ 0.18
TMEM260-214ENST00000556975 RAB32Q13637 225 aa16.17■□□□□ 0.18
TMEM260-214ENST00000556975 SPINK13Q1W4C9 94 aa16.17■□□□□ 0.18
TMEM260-214ENST00000556975 FAM222AQ5U5X8 452 aa16.17■□□□□ 0.18
TMEM260-214ENST00000556975 NRARPQ7Z6K4 114 aa16.17■□□□□ 0.18
TMEM260-214ENST00000556975 BPIFA4PQ86YQ2 179 aa16.17■□□□□ 0.18
TMEM260-214ENST00000556975 NIPSNAP3BQ9BS92 247 aa16.17■□□□□ 0.18
TMEM260-214ENST00000556975 UQCC1Q9NVA1 299 aa16.17■□□□□ 0.18
TMEM260-214ENST00000556975 M0R2Z0 102 aa16.16■□□□□ 0.18
TMEM260-214ENST00000556975 COX7A2P2O60397 106 aa16.16■□□□□ 0.18
TMEM260-214ENST00000556975 S100A11P31949 105 aa16.16■□□□□ 0.18
TMEM260-214ENST00000556975 SULT1A1P50225 295 aa16.16■□□□□ 0.18
TMEM260-214ENST00000556975 B2MP61769 119 aa16.16■□□□□ 0.18
TMEM260-214ENST00000556975 LCN15Q6UWW0 184 aa16.16■□□□□ 0.18
TMEM260-214ENST00000556975 Q6ZRG5 221 aa16.16■□□□□ 0.18
TMEM260-214ENST00000556975 TMEM252Q8N6L7 170 aa16.16■□□□□ 0.18
TMEM260-214ENST00000556975 TMEM208Q9BTX3 173 aa16.16■□□□□ 0.18
TMEM260-214ENST00000556975 DNAJC4Q9NNZ3 241 aa16.16■□□□□ 0.18
TMEM260-214ENST00000556975 ZNF331Q9NQX6 463 aaPredicted RBP16.16■□□□□ 0.18
TMEM260-214ENST00000556975 UPK1BO75841 260 aa16.15■□□□□ 0.18
TMEM260-214ENST00000556975 INSP01308 110 aa16.15■□□□□ 0.18
TMEM260-214ENST00000556975 S100A10P60903 97 aa16.15■□□□□ 0.18
TMEM260-214ENST00000556975 C10orf113Q5VZT2 155 aa16.15■□□□□ 0.18
TMEM260-214ENST00000556975 CHAC2Q8WUX2 184 aa16.15■□□□□ 0.18
TMEM260-214ENST00000556975 FAM210BQ96KR6 192 aa16.15■□□□□ 0.18
TMEM260-214ENST00000556975 SLC50A1Q9BRV3 221 aa16.15■□□□□ 0.18
TMEM260-214ENST00000556975 NDUFAF3Q9BU61 184 aa16.15■□□□□ 0.18
TMEM260-214ENST00000556975 YTHDF2Q9Y5A9 579 aaKnown RBP16.15■□□□□ 0.18
TMEM260-214ENST00000556975 IGSF23A1L1A6 192 aa16.14■□□□□ 0.17
TMEM260-214ENST00000556975 BOLA2-SMG1P6H3BVE0 249 aa16.14■□□□□ 0.17
TMEM260-214ENST00000556975 HIST1H1AQ02539 215 aaPredicted RBP16.14■□□□□ 0.17
TMEM260-214ENST00000556975 OPCMLQ14982 345 aa16.14■□□□□ 0.17
TMEM260-214ENST00000556975 MORN5Q5VZ52 161 aa16.14■□□□□ 0.17
TMEM260-214ENST00000556975 RPL29P47914 159 aaKnown RBP16.13■□□□□ 0.17
TMEM260-214ENST00000556975 HBG1P69891 147 aa16.13■□□□□ 0.17
TMEM260-214ENST00000556975 HBG2P69892 147 aa16.13■□□□□ 0.17
TMEM260-214ENST00000556975 ATP6V1FQ16864 119 aa16.13■□□□□ 0.17
TMEM260-214ENST00000556975 MIC13Q5XKP0 118 aa16.13■□□□□ 0.17
TMEM260-214ENST00000556975 STX12Q86Y82 276 aa16.13■□□□□ 0.17
TMEM260-214ENST00000556975 OR1L4Q8NGR5 311 aa16.13■□□□□ 0.17
TMEM260-214ENST00000556975 ENKURQ8TC29 256 aa16.13■□□□□ 0.17
TMEM260-214ENST00000556975 RPUSD4Q96CM3 377 aaKnown RBP16.13■□□□□ 0.17
TMEM260-214ENST00000556975 GPN1Q9HCN4 374 aaPredicted RBP16.13■□□□□ 0.17
TMEM260-214ENST00000556975 HERC2O95714 4834 aa16.13■□□□□ 0.17
TMEM260-214ENST00000556975 IGLC2P0DOY2 106 aa16.12■□□□□ 0.17
TMEM260-214ENST00000556975 TSPOP30536 169 aa16.12■□□□□ 0.17
TMEM260-214ENST00000556975 RHOBP62745 196 aa16.12■□□□□ 0.17
TMEM260-214ENST00000556975 IFITM3Q01628 133 aa16.12■□□□□ 0.17
TMEM260-214ENST00000556975 SAT2Q96F10 170 aaPredicted RBP16.12■□□□□ 0.17
TMEM260-214ENST00000556975 PFDN5Q99471 154 aa16.12■□□□□ 0.17
TMEM260-214ENST00000556975 PTTG2Q9NZH5 202 aa16.12■□□□□ 0.17
TMEM260-214ENST00000556975 PLA2G2EQ9NZK7 142 aa16.12■□□□□ 0.17
TMEM260-214ENST00000556975 BAP18Q8IXM2 172 aa16.11■□□□□ 0.17
TMEM260-214ENST00000556975 TRAV12-2A0A075B6T6 113 aa16.1■□□□□ 0.17
TMEM260-214ENST00000556975 ZNF705GA8MUZ8 300 aaPredicted RBP16.1■□□□□ 0.17
TMEM260-214ENST00000556975 P0DMU3 169 aa16.1■□□□□ 0.17
TMEM260-214ENST00000556975 FAM231AP0DMU4 169 aa16.1■□□□□ 0.17
TMEM260-214ENST00000556975 FAM231CP0DMU5 169 aa16.1■□□□□ 0.17
TMEM260-214ENST00000556975 TMEM256Q8N2U0 113 aa16.1■□□□□ 0.17
TMEM260-214ENST00000556975 KRTAP17-1Q9BYP8 105 aa16.1■□□□□ 0.17
TMEM260-214ENST00000556975 SLC39A9Q9NUM3 307 aa16.1■□□□□ 0.17
TMEM260-214ENST00000556975 PPP1R14DQ9NXH3 145 aa16.1■□□□□ 0.17
TMEM260-214ENST00000556975 PXMP4Q9Y6I8 212 aa16.1■□□□□ 0.17
TMEM260-214ENST00000556975 UBE2L5PA0A1B0GUS4 154 aa16.09■□□□□ 0.17
TMEM260-214ENST00000556975 H3BQ15 152 aa16.09■□□□□ 0.17
TMEM260-214ENST00000556975 SLC17A3O00476 420 aa16.09■□□□□ 0.17
TMEM260-214ENST00000556975 PRAF2O60831 178 aa16.09■□□□□ 0.17
TMEM260-214ENST00000556975 MPDU1O75352 247 aa16.09■□□□□ 0.17
TMEM260-214ENST00000556975 PRM2P04554 102 aa16.09■□□□□ 0.17
TMEM260-214ENST00000556975 SNRPCP09234 159 aaKnown RBP16.09■□□□□ 0.17
TMEM260-214ENST00000556975 BAXQ07812 192 aa16.09■□□□□ 0.17
TMEM260-214ENST00000556975 GUK1Q16774 197 aa16.09■□□□□ 0.17
TMEM260-214ENST00000556975 NMES1Q9C002 83 aa16.09■□□□□ 0.17
TMEM260-214ENST00000556975 TRAV5A0A0B4J249 113 aa16.08■□□□□ 0.16
TMEM260-214ENST00000556975 LYRM9A8MSI8 78 aa16.08■□□□□ 0.16
TMEM260-214ENST00000556975 CDKN1BP46527 198 aa16.08■□□□□ 0.16
TMEM260-214ENST00000556975 DAD1P61803 113 aa16.08■□□□□ 0.16
TMEM260-214ENST00000556975 POM121L12Q8N7R1 296 aa16.08■□□□□ 0.16
TMEM260-214ENST00000556975 RLN2P04090 185 aa16.07■□□□□ 0.16
TMEM260-214ENST00000556975 LINC01587Q99440 93 aa16.07■□□□□ 0.16
TMEM260-214ENST00000556975 PLAC8L1A1L4L8 177 aa16.06■□□□□ 0.16
TMEM260-214ENST00000556975 E5RGE8 158 aa16.06■□□□□ 0.16
TMEM260-214ENST00000556975 INMT-MINDY4F8WBC2 141 aa16.06■□□□□ 0.16
TMEM260-214ENST00000556975 H3BTX0 84 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms