RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 IGKV3-20P01619 116 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 IGLC2P0DOY2 106 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 C4BPBP20851 252 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 DEFB1P60022 68 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 Q5BKY6 102 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 CASC10Q5T4H9 136 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 FAM78BQ5VT40 261 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 RNF182Q8N6D2 247 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 INO80EQ8NBZ0 244 aaPredicted RBP7.79□□□□□ -1.16
LINC00239-201ENST00000556973 CSNK1G2-AS1Q8NCQ2 148 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 SAT2Q96F10 170 aaPredicted RBP7.79□□□□□ -1.16
LINC00239-201ENST00000556973 WFDC1Q9HC57 220 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 ZNF331Q9NQX6 463 aaPredicted RBP7.79□□□□□ -1.16
LINC00239-201ENST00000556973 TMEM14CQ9P0S9 112 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 XCL2Q9UBD3 114 aa7.79□□□□□ -1.16
LINC00239-201ENST00000556973 A8MTW9 85 aa7.78□□□□□ -1.16
LINC00239-201ENST00000556973 H3BQ15 152 aa7.78□□□□□ -1.16
LINC00239-201ENST00000556973 HIST1H1EP10412 219 aaKnown RBP7.78□□□□□ -1.16
LINC00239-201ENST00000556973 PSG9Q00887 426 aa7.78□□□□□ -1.16
LINC00239-201ENST00000556973 ZNF266Q14584 549 aa7.78□□□□□ -1.16
LINC00239-201ENST00000556973 GCSAMLQ5JQS6 135 aa7.78□□□□□ -1.16
LINC00239-201ENST00000556973 ZNF738Q8NE65 137 aa7.78□□□□□ -1.16
LINC00239-201ENST00000556973 OR2T35Q8NGX2 323 aa7.78□□□□□ -1.16
LINC00239-201ENST00000556973 MRPL32Q9BYC8 188 aaKnown RBP7.78□□□□□ -1.16
LINC00239-201ENST00000556973 ZNF586Q9NXT0 402 aa7.78□□□□□ -1.16
LINC00239-201ENST00000556973 ZNF705EA8MWA4 302 aaPredicted RBP7.77□□□□□ -1.17
LINC00239-201ENST00000556973 ZNF253O75346 499 aa7.77□□□□□ -1.17
LINC00239-201ENST00000556973 SNRPCP09234 159 aaKnown RBP7.77□□□□□ -1.17
LINC00239-201ENST00000556973 MIFP14174 115 aa7.77□□□□□ -1.17
LINC00239-201ENST00000556973 HLA-DMBP28068 263 aa7.77□□□□□ -1.17
LINC00239-201ENST00000556973 FFAR4Q5NUL3 377 aa7.77□□□□□ -1.17
LINC00239-201ENST00000556973 MIR17HGQ75NE6 70 aa7.77□□□□□ -1.17
LINC00239-201ENST00000556973 OR8A1Q8NGG7 326 aa7.77□□□□□ -1.17
LINC00239-201ENST00000556973 OR51M1Q9H341 326 aa7.77□□□□□ -1.17
LINC00239-201ENST00000556973 TNFSF18Q9UNG2 199 aa7.77□□□□□ -1.17
LINC00239-201ENST00000556973 FUT9Q9Y231 359 aa7.77□□□□□ -1.17
LINC00239-201ENST00000556973 TIMM9Q9Y5J7 89 aa7.77□□□□□ -1.17
LINC00239-201ENST00000556973 TENM3Q9P273 2699 aa7.77□□□□□ -1.17
LINC00239-201ENST00000556973 NBEAL2Q6ZNJ1 2754 aa7.76□□□□□ -1.17
LINC00239-201ENST00000556973 TRBV19A0A075B6N1 114 aa7.76□□□□□ -1.17
LINC00239-201ENST00000556973 FXYD6-FXYD2A0A087WZ82 144 aa7.76□□□□□ -1.17
LINC00239-201ENST00000556973 ZNF705DP0CH99 300 aaPredicted RBP7.76□□□□□ -1.17
LINC00239-201ENST00000556973 ZNF705BP0CI00 300 aaPredicted RBP7.76□□□□□ -1.17
LINC00239-201ENST00000556973 CNN1P51911 297 aaKnown RBP7.76□□□□□ -1.17
LINC00239-201ENST00000556973 FXYD7P58549 80 aa7.76□□□□□ -1.17
LINC00239-201ENST00000556973 RHOBP62745 196 aa7.76□□□□□ -1.17
LINC00239-201ENST00000556973 RPUSD4Q96CM3 377 aaKnown RBP7.76□□□□□ -1.17
LINC00239-201ENST00000556973 FAM167A-AS1Q96KT0 104 aa7.76□□□□□ -1.17
LINC00239-201ENST00000556973 SLC25A2Q9BXI2 301 aa7.76□□□□□ -1.17
LINC00239-201ENST00000556973 MFFQ9GZY8 342 aa7.76□□□□□ -1.17
LINC00239-201ENST00000556973 SLC35B3Q9H1N7 401 aa7.76□□□□□ -1.17
LINC00239-201ENST00000556973 C11orf68Q9H3H3 251 aaKnown RBP7.76□□□□□ -1.17
LINC00239-201ENST00000556973 SMIM9A6NGZ8 99 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 ZNF705FA8MVS1 300 aaPredicted RBP7.75□□□□□ -1.17
LINC00239-201ENST00000556973 H3BTX0 84 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 SLC17A3O00476 420 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 AMBPP02760 352 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 PYYP10082 97 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 M6PRP20645 277 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 PDE6HQ13956 83 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 ACOT6Q3I5F7 207 aaPredicted RBP7.75□□□□□ -1.17
LINC00239-201ENST00000556973 ZFAND6Q6FIF0 208 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 AMTNQ6UX39 209 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 OR10J6PQ8NGY7 276 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 MRPL53Q96EL3 112 aaKnown RBP7.75□□□□□ -1.17
LINC00239-201ENST00000556973 NEU1Q99519 415 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 PPP1R14DQ9NXH3 145 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 PRELID1Q9Y255 219 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 X6R8D5 127 aa7.75□□□□□ -1.17
LINC00239-201ENST00000556973 BORCS7-ASMTA0A0B4J1R7 106 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 A0A1W2PPV4 95 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 RNF222A6NCQ9 220 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 G3V3Q6 166 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 TAAR5O14804 337 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 NBEAP1P0C6P0 100 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 TAS2R45P59539 299 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 SERF2P84101 59 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 HIST1H1AQ02539 215 aaPredicted RBP7.74□□□□□ -1.17
LINC00239-201ENST00000556973 ZNF705AQ6ZN79 300 aaPredicted RBP7.74□□□□□ -1.17
LINC00239-201ENST00000556973 Q8NAQ8 132 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 C11orf45Q8TAV5 145 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 BLNKQ8WV28 456 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 RNF141Q8WVD5 230 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 PSMG3Q9BT73 122 aaPredicted RBP7.74□□□□□ -1.17
LINC00239-201ENST00000556973 PAXXQ9BUH6 204 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 AAMDCQ9H7C9 122 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 RFNGQ9Y644 331 aa7.74□□□□□ -1.17
LINC00239-201ENST00000556973 IGHV4-28A0A0C4DH34 117 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 DEFB4AO15263 64 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 OR7C2O60412 319 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 NDUFB4O95168 129 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 MBP02144 154 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 RBMY1A1P0DJD3 496 aaKnown RBP7.73□□□□□ -1.17
LINC00239-201ENST00000556973 RBMY1CP0DJD4 496 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 RBMY1FQ15415 496 aaKnown RBP7.73□□□□□ -1.17
LINC00239-201ENST00000556973 KHDC3LQ587J8 217 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 HSD17B11Q8NBQ5 300 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 OR10G4Q8NGN3 311 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 OR10G9Q8NGN4 311 aa7.73□□□□□ -1.17
LINC00239-201ENST00000556973 OR10G7Q8NGN6 311 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms