RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 IGKV3-20P01619 116 aa16.62■□□□□ 0.25
TDP1-216ENST00000556867 IGLC2P0DOY2 106 aa16.62■□□□□ 0.25
TDP1-216ENST00000556867 FAM78BQ5VT40 261 aa16.62■□□□□ 0.25
TDP1-216ENST00000556867 OR4B1Q8NGF8 309 aa16.62■□□□□ 0.25
TDP1-216ENST00000556867 ASB13Q8WXK3 278 aa16.62■□□□□ 0.25
TDP1-216ENST00000556867 ZNF709Q8N972 641 aa16.61■□□□□ 0.25
TDP1-216ENST00000556867 ZNF738Q8NE65 137 aa16.61■□□□□ 0.25
TDP1-216ENST00000556867 LRRC20Q8TCA0 184 aa16.61■□□□□ 0.25
TDP1-216ENST00000556867 SLC50A1Q9BRV3 221 aa16.61■□□□□ 0.25
TDP1-216ENST00000556867 HRH4Q9H3N8 390 aa16.61■□□□□ 0.25
TDP1-216ENST00000556867 XCL2Q9UBD3 114 aa16.61■□□□□ 0.25
TDP1-216ENST00000556867 TRAV5A0A0B4J249 113 aa16.6■□□□□ 0.25
TDP1-216ENST00000556867 GIPP09681 153 aaPredicted RBP16.6■□□□□ 0.25
TDP1-216ENST00000556867 PSG9Q00887 426 aa16.6■□□□□ 0.25
TDP1-216ENST00000556867 Q8NAQ8 132 aa16.6■□□□□ 0.25
TDP1-216ENST00000556867 ZNF331Q9NQX6 463 aaPredicted RBP16.6■□□□□ 0.25
TDP1-216ENST00000556867 C17orf112F2Z3M2 114 aa16.59■□□□□ 0.25
TDP1-216ENST00000556867 HLA-DMBP28068 263 aa16.59■□□□□ 0.25
TDP1-216ENST00000556867 PSG3Q16557 428 aa16.59■□□□□ 0.25
TDP1-216ENST00000556867 GCSAMLQ5JQS6 135 aa16.59■□□□□ 0.25
TDP1-216ENST00000556867 SMIM3Q9BZL3 60 aa16.59■□□□□ 0.25
TDP1-216ENST00000556867 X6R8D5 127 aa16.59■□□□□ 0.25
TDP1-216ENST00000556867 TENM2Q9NT68 2774 aa16.58■□□□□ 0.25
TDP1-216ENST00000556867 H3BQ15 152 aa16.58■□□□□ 0.24
TDP1-216ENST00000556867 DUSP14O95147 198 aaKnown RBP16.58■□□□□ 0.24
TDP1-216ENST00000556867 IFNA5P01569 189 aa16.58■□□□□ 0.24
TDP1-216ENST00000556867 MIFP14174 115 aa16.58■□□□□ 0.24
TDP1-216ENST00000556867 GUK1Q16774 197 aa16.58■□□□□ 0.24
TDP1-216ENST00000556867 PARD6GQ9BYG4 376 aaPredicted RBP16.58■□□□□ 0.24
TDP1-216ENST00000556867 SLC35B3Q9H1N7 401 aa16.58■□□□□ 0.24
TDP1-216ENST00000556867 TMEM14CQ9P0S9 112 aa16.58■□□□□ 0.24
TDP1-216ENST00000556867 SLC17A3O00476 420 aa16.57■□□□□ 0.24
TDP1-216ENST00000556867 SNRPCP09234 159 aaKnown RBP16.57■□□□□ 0.24
TDP1-216ENST00000556867 CNN1P51911 297 aaKnown RBP16.57■□□□□ 0.24
TDP1-216ENST00000556867 FXYD7P58549 80 aa16.57■□□□□ 0.24
TDP1-216ENST00000556867 AMTNQ6UX39 209 aa16.57■□□□□ 0.24
TDP1-216ENST00000556867 SAT2Q96F10 170 aaPredicted RBP16.57■□□□□ 0.24
TDP1-216ENST00000556867 IGHV4-28A0A0C4DH34 117 aa16.56■□□□□ 0.24
TDP1-216ENST00000556867 H3BTX0 84 aa16.56■□□□□ 0.24
TDP1-216ENST00000556867 ZNF705AQ6ZN79 300 aaPredicted RBP16.56■□□□□ 0.24
TDP1-216ENST00000556867 SCGB1C1Q8TD33 95 aa16.56■□□□□ 0.24
TDP1-216ENST00000556867 MFFQ9GZY8 342 aa16.56■□□□□ 0.24
TDP1-216ENST00000556867 WFDC1Q9HC57 220 aa16.56■□□□□ 0.24
TDP1-216ENST00000556867 ZNF253O75346 499 aa16.55■□□□□ 0.24
TDP1-216ENST00000556867 OR8A1Q8NGG7 326 aa16.55■□□□□ 0.24
TDP1-216ENST00000556867 RPUSD4Q96CM3 377 aaKnown RBP16.55■□□□□ 0.24
TDP1-216ENST00000556867 AQP10Q96PS8 301 aa16.55■□□□□ 0.24
TDP1-216ENST00000556867 MRPL32Q9BYC8 188 aaKnown RBP16.55■□□□□ 0.24
TDP1-216ENST00000556867 ZNF586Q9NXT0 402 aa16.55■□□□□ 0.24
TDP1-216ENST00000556867 DYNC2H1Q8NCM8 4307 aaKnown RBP16.55■□□□□ 0.24
TDP1-216ENST00000556867 DEFB4AO15263 64 aa16.54■□□□□ 0.24
TDP1-216ENST00000556867 ZNF705DP0CH99 300 aaPredicted RBP16.54■□□□□ 0.24
TDP1-216ENST00000556867 ZNF705BP0CI00 300 aaPredicted RBP16.54■□□□□ 0.24
TDP1-216ENST00000556867 RBMY1A1P0DJD3 496 aaKnown RBP16.54■□□□□ 0.24
TDP1-216ENST00000556867 RBMY1CP0DJD4 496 aa16.54■□□□□ 0.24
TDP1-216ENST00000556867 RBMY1FQ15415 496 aaKnown RBP16.54■□□□□ 0.24
TDP1-216ENST00000556867 Q5BKY6 102 aa16.54■□□□□ 0.24
TDP1-216ENST00000556867 FAM167A-AS1Q96KT0 104 aa16.54■□□□□ 0.24
TDP1-216ENST00000556867 SLC25A2Q9BXI2 301 aa16.54■□□□□ 0.24
TDP1-216ENST00000556867 CXorf65A6NEN9 183 aa16.53■□□□□ 0.24
TDP1-216ENST00000556867 ZNF705FA8MVS1 300 aaPredicted RBP16.53■□□□□ 0.24
TDP1-216ENST00000556867 AMBPP02760 352 aa16.53■□□□□ 0.24
TDP1-216ENST00000556867 HIST1H1EP10412 219 aaKnown RBP16.53■□□□□ 0.24
TDP1-216ENST00000556867 HIST1H1AQ02539 215 aaPredicted RBP16.53■□□□□ 0.24
TDP1-216ENST00000556867 PMS2P11Q13670 270 aa16.53■□□□□ 0.24
TDP1-216ENST00000556867 MIR17HGQ75NE6 70 aa16.53■□□□□ 0.24
TDP1-216ENST00000556867 NEU1Q99519 415 aa16.53■□□□□ 0.24
TDP1-216ENST00000556867 TRBV19A0A075B6N1 114 aa16.52■□□□□ 0.24
TDP1-216ENST00000556867 FFAR4Q5NUL3 377 aa16.52■□□□□ 0.24
TDP1-216ENST00000556867 C11orf45Q8TAV5 145 aa16.52■□□□□ 0.24
TDP1-216ENST00000556867 FUT9Q9Y231 359 aa16.52■□□□□ 0.24
TDP1-216ENST00000556867 PYYP10082 97 aa16.51■□□□□ 0.23
TDP1-216ENST00000556867 PDE6HQ13956 83 aa16.51■□□□□ 0.23
TDP1-216ENST00000556867 IGF2BP2-AS1Q96M15 143 aa16.51■□□□□ 0.23
TDP1-216ENST00000556867 NUPR2A6NF83 97 aa16.5■□□□□ 0.23
TDP1-216ENST00000556867 BOLA2-SMG1P6H3BVE0 249 aa16.5■□□□□ 0.23
TDP1-216ENST00000556867 ZNF266Q14584 549 aa16.5■□□□□ 0.23
TDP1-216ENST00000556867 OR2T35Q8NGX2 323 aa16.5■□□□□ 0.23
TDP1-216ENST00000556867 GOLT1BQ9Y3E0 138 aa16.5■□□□□ 0.23
TDP1-216ENST00000556867 TIMM9Q9Y5J7 89 aa16.5■□□□□ 0.23
TDP1-216ENST00000556867 LYSTQ99698 3801 aa16.49■□□□□ 0.23
TDP1-216ENST00000556867 SMIM9A6NGZ8 99 aa16.49■□□□□ 0.23
TDP1-216ENST00000556867 M0R2Z0 102 aa16.49■□□□□ 0.23
TDP1-216ENST00000556867 NDUFB4O95168 129 aa16.49■□□□□ 0.23
TDP1-216ENST00000556867 SPINK13Q1W4C9 94 aa16.49■□□□□ 0.23
TDP1-216ENST00000556867 C1orf158Q8N1D5 194 aa16.49■□□□□ 0.23
TDP1-216ENST00000556867 MRPL53Q96EL3 112 aaKnown RBP16.49■□□□□ 0.23
TDP1-216ENST00000556867 PRB4P10163 310 aaPredicted RBP16.48■□□□□ 0.23
TDP1-216ENST00000556867 NANOS2P60321 138 aaKnown RBP16.48■□□□□ 0.23
TDP1-216ENST00000556867 RHOBP62745 196 aa16.48■□□□□ 0.23
TDP1-216ENST00000556867 CEMP1Q6PRD7 247 aaPredicted RBP16.48■□□□□ 0.23
TDP1-216ENST00000556867 OR51M1Q9H341 326 aa16.48■□□□□ 0.23
TDP1-216ENST00000556867 RYR3Q15413 4870 aa16.47■□□□□ 0.23
TDP1-216ENST00000556867 IGHV3OR16-12A0A075B7B8 117 aa16.47■□□□□ 0.23
TDP1-216ENST00000556867 FXYD6-FXYD2A0A087WZ82 144 aa16.47■□□□□ 0.23
TDP1-216ENST00000556867 PRAC2D3DTV9 90 aa16.47■□□□□ 0.23
TDP1-216ENST00000556867 G3V3Q6 166 aa16.47■□□□□ 0.23
TDP1-216ENST00000556867 CRXO43186 299 aaPredicted RBP16.47■□□□□ 0.23
TDP1-216ENST00000556867 INSP01308 110 aa16.47■□□□□ 0.23
TDP1-216ENST00000556867 INO80EQ8NBZ0 244 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms