RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 APRG1Q8IVJ8 170 aa13.01□□□□□ -0.33
PSEN1-218ENST00000556864 STOML3Q8TAV4 291 aa13.01□□□□□ -0.33
PSEN1-218ENST00000556864 LINC00052Q96N35 136 aa13.01□□□□□ -0.33
PSEN1-218ENST00000556864 CLEC5AQ9NY25 188 aa13.01□□□□□ -0.33
PSEN1-218ENST00000556864 SPP1P10451 314 aa13□□□□□ -0.33
PSEN1-218ENST00000556864 PDE6HQ13956 83 aa13□□□□□ -0.33
PSEN1-218ENST00000556864 LGALSLQ3ZCW2 172 aaPredicted RBP13□□□□□ -0.33
PSEN1-218ENST00000556864 EIF5AL1Q6IS14 154 aaKnown RBP13□□□□□ -0.33
PSEN1-218ENST00000556864 PQLC2Q6ZP29 291 aa13□□□□□ -0.33
PSEN1-218ENST00000556864 BAP18Q8IXM2 172 aa13□□□□□ -0.33
PSEN1-218ENST00000556864 C9orf62Q8N4C0 152 aa13□□□□□ -0.33
PSEN1-218ENST00000556864 FAM167A-AS1Q96KT0 104 aa13□□□□□ -0.33
PSEN1-218ENST00000556864 B9D2Q9BPU9 175 aa13□□□□□ -0.33
PSEN1-218ENST00000556864 PAXXQ9BUH6 204 aa13□□□□□ -0.33
PSEN1-218ENST00000556864 ACTR3CQ9C0K3 210 aaPredicted RBP13□□□□□ -0.33
PSEN1-218ENST00000556864 OR51M1Q9H341 326 aa13□□□□□ -0.33
PSEN1-218ENST00000556864 RPRMQ9NS64 109 aa13□□□□□ -0.33
PSEN1-218ENST00000556864 LOC102724200A0A096LPH7 203 aaPredicted RBP12.99□□□□□ -0.33
PSEN1-218ENST00000556864 SEC11BP0C7V7 166 aa12.99□□□□□ -0.33
PSEN1-218ENST00000556864 PYYP10082 97 aa12.99□□□□□ -0.33
PSEN1-218ENST00000556864 STHQ8IWL8 128 aa12.99□□□□□ -0.33
PSEN1-218ENST00000556864 ZNF331Q9NQX6 463 aaPredicted RBP12.99□□□□□ -0.33
PSEN1-218ENST00000556864 TRBV19A0A075B6N1 114 aa12.98□□□□□ -0.33
PSEN1-218ENST00000556864 APOC4P55056 127 aa12.98□□□□□ -0.33
PSEN1-218ENST00000556864 PSG9Q00887 426 aa12.98□□□□□ -0.33
PSEN1-218ENST00000556864 FOXI2Q6ZQN5 318 aa12.98□□□□□ -0.33
PSEN1-218ENST00000556864 SLC51BQ86UW2 128 aa12.98□□□□□ -0.33
PSEN1-218ENST00000556864 ZNF738Q8NE65 137 aa12.98□□□□□ -0.33
PSEN1-218ENST00000556864 C17orf77Q96MU5 243 aa12.98□□□□□ -0.33
PSEN1-218ENST00000556864 SORL1Q92673 2214 aa12.97□□□□□ -0.33
PSEN1-218ENST00000556864 TRAV8-2A0A0B4J237 113 aa12.97□□□□□ -0.33
PSEN1-218ENST00000556864 UMAD1C9J7I0 102 aa12.97□□□□□ -0.33
PSEN1-218ENST00000556864 H3BQ15 152 aa12.97□□□□□ -0.33
PSEN1-218ENST00000556864 ACTL10Q5JWF8 245 aa12.97□□□□□ -0.33
PSEN1-218ENST00000556864 EBLN2Q6P2I7 272 aa12.97□□□□□ -0.33
PSEN1-218ENST00000556864 RPP25LQ8N5L8 163 aaKnown RBP12.97□□□□□ -0.33
PSEN1-218ENST00000556864 RNF141Q8WVD5 230 aa12.97□□□□□ -0.33
PSEN1-218ENST00000556864 CITED4Q96RK1 184 aa12.97□□□□□ -0.33
PSEN1-218ENST00000556864 ZNF586Q9NXT0 402 aa12.97□□□□□ -0.33
PSEN1-218ENST00000556864 CTXND1A0A1B0GTU2 59 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 KNCNA6PVL3 124 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 H3BTX0 84 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 SLC17A3O00476 420 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 OR10J4P0C629 311 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 HLA-DRB4P13762 266 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 ZNF124Q15973 351 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 LINC00322Q6ZN03 302 aaPredicted RBP12.96□□□□□ -0.33
PSEN1-218ENST00000556864 BLNKQ8WV28 456 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 RAB24Q969Q5 203 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 FXYD5Q96DB9 178 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 AAMDCQ9H7C9 122 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 PRELID1Q9Y255 219 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 HLA-DRB4X5D2U9 266 aa12.96□□□□□ -0.33
PSEN1-218ENST00000556864 KIR2DL5BA0A0G2JN68 375 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 KIR2DL5BA0A0G2JPC4 375 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 RBMY1BA6NDE4 496 aaKnown RBP12.95□□□□□ -0.34
PSEN1-218ENST00000556864 RBMY1EA6NEQ0 496 aaKnown RBP12.95□□□□□ -0.34
PSEN1-218ENST00000556864 CXorf1O96002 111 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 SNRPCP09234 159 aaKnown RBP12.95□□□□□ -0.34
PSEN1-218ENST00000556864 NBEAP1P0C6P0 100 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 RBMY1DP0C7P1 496 aaKnown RBP12.95□□□□□ -0.34
PSEN1-218ENST00000556864 STAG3L2P0CL84 134 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 STAG3L3P0CL85 134 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 PSG3Q16557 428 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 DPPA3Q6W0C5 159 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 TRPT1Q86TN4 253 aaKnown RBP12.95□□□□□ -0.34
PSEN1-218ENST00000556864 KIR2DL5AQ8N109 375 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 RNF182Q8N6D2 247 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 KIR2DL5BQ8NHK3 375 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 TMED6Q8WW62 240 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 SAT2Q96F10 170 aaPredicted RBP12.95□□□□□ -0.34
PSEN1-218ENST00000556864 C20orf173Q96LM9 149 aa12.95□□□□□ -0.34
PSEN1-218ENST00000556864 SAV1Q9H4B6 383 aaPredicted RBP12.95□□□□□ -0.34
PSEN1-218ENST00000556864 DUSP14O95147 198 aaKnown RBP12.94□□□□□ -0.34
PSEN1-218ENST00000556864 ARL14EPLP0DKL9 152 aa12.94□□□□□ -0.34
PSEN1-218ENST00000556864 RPL35AP18077 110 aaKnown RBP12.94□□□□□ -0.34
PSEN1-218ENST00000556864 MORN3Q6PF18 240 aaPredicted RBP12.94□□□□□ -0.34
PSEN1-218ENST00000556864 MRPL53Q96EL3 112 aaKnown RBP12.94□□□□□ -0.34
PSEN1-218ENST00000556864 UBE2CO00762 179 aa12.93□□□□□ -0.34
PSEN1-218ENST00000556864 HMGB3O15347 200 aaKnown RBP12.93□□□□□ -0.34
PSEN1-218ENST00000556864 HAGHQ16775 308 aa12.93□□□□□ -0.34
PSEN1-218ENST00000556864 IGFL4Q6B9Z1 124 aa12.93□□□□□ -0.34
PSEN1-218ENST00000556864 LYPD1Q8N2G4 141 aa12.93□□□□□ -0.34
PSEN1-218ENST00000556864 ZNF503Q96F45 646 aa12.93□□□□□ -0.34
PSEN1-218ENST00000556864 PHYHIPLQ96FC7 376 aa12.93□□□□□ -0.34
PSEN1-218ENST00000556864 TMEM167BQ9NRX6 74 aa12.93□□□□□ -0.34
PSEN1-218ENST00000556864 A0A0J9YX75 114 aa12.92□□□□□ -0.34
PSEN1-218ENST00000556864 MAP1LC3B2A6NCE7 125 aa12.92□□□□□ -0.34
PSEN1-218ENST00000556864 H3BMM0 161 aa12.92□□□□□ -0.34
PSEN1-218ENST00000556864 EIF3GO75821 320 aaKnown RBP eCLIP12.92□□□□□ -0.34
PSEN1-218ENST00000556864 NDUFB4O95168 129 aa12.92□□□□□ -0.34
PSEN1-218ENST00000556864 NHLRC4P0CG21 123 aaPredicted RBP12.92□□□□□ -0.34
PSEN1-218ENST00000556864 HLA-DMBP28068 263 aa12.92□□□□□ -0.34
PSEN1-218ENST00000556864 GCHFRP30047 84 aa12.92□□□□□ -0.34
PSEN1-218ENST00000556864 RAB5CP51148 216 aa12.92□□□□□ -0.34
PSEN1-218ENST00000556864 NKX2-5P52952 324 aaPredicted RBP12.92□□□□□ -0.34
PSEN1-218ENST00000556864 NUTF2P61970 127 aaKnown RBP12.92□□□□□ -0.34
PSEN1-218ENST00000556864 IQCF2Q8IXL9 164 aa12.92□□□□□ -0.34
PSEN1-218ENST00000556864 FAM213BQ8TBF2 198 aa12.92□□□□□ -0.34
PSEN1-218ENST00000556864 RPUSD4Q96CM3 377 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms