RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 CAV2P51636 162 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 FAM78BQ5VT40 261 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 LGALS9CQ6DKI2 356 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 TMEM14EPQ6UXP3 125 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 Q6ZRG5 221 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 ZNF546Q86UE3 836 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 C12orf45Q8N5I9 185 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-222ENST00000556768 CSNK1G2-AS1Q8NCQ2 148 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 ZNF431Q8TF32 576 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-222ENST00000556768 SLC25A39Q9BZJ4 359 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-222ENST00000556768 ARL6Q9H0F7 186 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 DOK5Q9P104 306 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 TRAV10A0A0B4J240 114 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 TEX48A0A1B0GUV7 120 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 PLA2G10O15496 165 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 DEDDO75618 318 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 DUSP14O95147 198 aaKnown RBP5.3□□□□□ -1.56
SCFD1-222ENST00000556768 SPART-AS1P0CW21 52 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 RBMY1A1P0DJD3 496 aaKnown RBP5.3□□□□□ -1.56
SCFD1-222ENST00000556768 RBMY1CP0DJD4 496 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 RBMY1FQ15415 496 aaKnown RBP5.3□□□□□ -1.56
SCFD1-222ENST00000556768 GSG1LQ6UXU4 331 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 SHANK2-AS3Q9BTD1 123 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 GPN1Q9HCN4 374 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-222ENST00000556768 LSM5Q9Y4Y9 91 aaKnown RBP5.3□□□□□ -1.56
SCFD1-222ENST00000556768 SOCS3O14543 225 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 COX7A2P2O60397 106 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 HBE1P02100 147 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 AMBPP02760 352 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 RLN2P04090 185 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 EMP1P54849 157 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 PAX9P55771 341 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 PLP1P60201 277 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 B2MP61769 119 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 SUMO2P61956 95 aaKnown RBP5.3□□□□□ -1.56
SCFD1-222ENST00000556768 HBG1P69891 147 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 HBG2P69892 147 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 GDF5OSQ5U4N7 250 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 STX12Q86Y82 276 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 ENKURQ8TC29 256 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 C2orf50Q96LR7 162 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 ARV1Q9H2C2 271 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 RFNGQ9Y644 331 aa5.3□□□□□ -1.56
SCFD1-222ENST00000556768 TRGV11A0A075B6L2 103 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 A0A0J9YX75 114 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 K7EPK0 472 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 CCSO14618 274 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 AGPAT2O15120 278 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 S100A11P31949 105 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 CAMLGP49069 296 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 FXYD7P58549 80 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 S100A10P60903 97 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 RRN3P1Q2M238 152 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 ZNF705AQ6ZN79 300 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-222ENST00000556768 TMEM182Q6ZP80 229 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-222ENST00000556768 Q6ZTC4 211 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 LINC00305Q7Z4B0 112 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 BPIFA4PQ86YQ2 179 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 ZNF738Q8NE65 137 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 UHRF2Q96PU4 802 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 SCRT1Q9BWW7 348 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
SCFD1-222ENST00000556768 RCL1Q9Y2P8 373 aaKnown RBP5.29□□□□□ -1.56
SCFD1-222ENST00000556768 HYDINQ4G0P3 5121 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 DEFB131BA0A096LNP1 70 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 PMS2P5A8MQ11 134 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 ZNF705FA8MVS1 300 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-222ENST00000556768 F6UB75 175 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 H3BRN7 92 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 CST7O76096 145 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 ZNF705DP0CH99 300 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-222ENST00000556768 ZNF705BP0CI00 300 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-222ENST00000556768 RHOBP62745 196 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 SLC38A11Q08AI6 406 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 SEC22CQ9BRL7 303 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 SLC35B3Q9H1N7 401 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 DNAJC4Q9NNZ3 241 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 UQCC1Q9NVA1 299 aa5.28□□□□□ -1.56
SCFD1-222ENST00000556768 SULT1A1P50225 295 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 CNN1P51911 297 aaKnown RBP5.27□□□□□ -1.57
SCFD1-222ENST00000556768 DEFB1P60022 68 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 CYCSP99999 105 aaKnown RBP5.27□□□□□ -1.57
SCFD1-222ENST00000556768 ATP6V1FQ16864 119 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 C10orf113Q5VZT2 155 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 LCN15Q6UWW0 184 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 ZNF709Q8N972 641 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 OR1L4Q8NGR5 311 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 SAT2Q96F10 170 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-222ENST00000556768 IGF2BP2-AS1Q96M15 143 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 PFDN5Q99471 154 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 NDUFAF3Q9BU61 184 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 RNF126Q9BV68 326 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 KMT2AQ03164 3969 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 IGHV4-4A0A075B6R2 117 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 CCNKO75909 580 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 INSP01308 110 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 CXCL2P19875 107 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 DEFA1P59665 94 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 199.2 ms