RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 EIF3GO75821 320 aaKnown RBP eCLIP7□□□□□ -1.29
ACTN1-218ENST00000556343 IGLC2P0DOY2 106 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 PYYP10082 97 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 CD33P20138 364 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 CSN1S1P47710 185 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 CMC4P56277 68 aaPredicted RBP7□□□□□ -1.29
ACTN1-218ENST00000556343 CCL20P78556 96 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 C9orf66Q5T8R8 295 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 UQCC3Q6UW78 93 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 LINC00482Q8N8I6 264 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 CMTM2Q8TAZ6 248 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 RXFP4Q8TDU9 374 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 C16orf92Q96LL3 132 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 FAM210AQ96ND0 272 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 TCEAL7Q9BRU2 100 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 TMPRSS5Q9H3S3 457 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 NRN1Q9NPD7 142 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 PRELID1Q9Y255 219 aa7□□□□□ -1.29
ACTN1-218ENST00000556343 TRBV19A0A075B6N1 114 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 TRAV2A0A0B4J234 112 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 PDE6DO43924 150 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 PAGE4O60829 102 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 NDUFS6O75380 124 aaKnown RBP6.99□□□□□ -1.29
ACTN1-218ENST00000556343 BCL2P10415 239 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 UBE2G2P60604 165 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 RANP62826 216 aaKnown RBP6.99□□□□□ -1.29
ACTN1-218ENST00000556343 HAGHQ16775 308 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 DEFB114Q30KQ6 69 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 COMMD7Q86VX2 200 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 RPUSD4Q96CM3 377 aaKnown RBP6.99□□□□□ -1.29
ACTN1-218ENST00000556343 ZNF503Q96F45 646 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 TREM1Q9NP99 234 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 OTORQ9NRC9 128 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 ZNF586Q9NXT0 402 aa6.99□□□□□ -1.29
ACTN1-218ENST00000556343 ZMAT5Q9UDW3 170 aaKnown RBP6.99□□□□□ -1.29
ACTN1-218ENST00000556343 PGPA6NDG6 321 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 C11orf94C9JXX5 98 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 H3BQ15 152 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 K7EQM0 130 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 TSPAN4O14817 238 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 MRPS12O15235 138 aaKnown RBP6.98□□□□□ -1.29
ACTN1-218ENST00000556343 SNRPD3P62318 126 aaKnown RBP6.98□□□□□ -1.29
ACTN1-218ENST00000556343 SUMO1P63165 101 aaKnown RBP6.98□□□□□ -1.29
ACTN1-218ENST00000556343 TOR2AQ5JU69 321 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 ZNF506Q5JVG8 444 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 FAM90A2PQ658T7 463 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 LCN12Q6JVE5 192 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 ARL6IP6Q8N6S5 226 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 SPAG8Q99932 426 aaPredicted RBP6.98□□□□□ -1.29
ACTN1-218ENST00000556343 Q9H3A6 140 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 MLXQ9UH92 298 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 SMAD5-AS1Q9Y6J3 95 aa6.98□□□□□ -1.29
ACTN1-218ENST00000556343 LOC102723971A0A1B0GUV8 181 aa6.97□□□□□ -1.29
ACTN1-218ENST00000556343 SERTM2A0A1B0GWG4 89 aa6.97□□□□□ -1.29
ACTN1-218ENST00000556343 OR4C46A6NHA9 309 aa6.97□□□□□ -1.29
ACTN1-218ENST00000556343 FAM74A7A6NL05 159 aa6.97□□□□□ -1.29
ACTN1-218ENST00000556343 ISLRO14498 428 aa6.97□□□□□ -1.29
ACTN1-218ENST00000556343 SLC25A5P05141 298 aaKnown RBP6.97□□□□□ -1.29
ACTN1-218ENST00000556343 S100A9P06702 114 aaKnown RBP6.97□□□□□ -1.29
ACTN1-218ENST00000556343 MEF2BQ02080 365 aaPredicted RBP6.97□□□□□ -1.29
ACTN1-218ENST00000556343 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.97□□□□□ -1.29
ACTN1-218ENST00000556343 WFDC3Q8IUB2 231 aa6.97□□□□□ -1.29
ACTN1-218ENST00000556343 WFDC9Q8NEX5 89 aa6.97□□□□□ -1.29
ACTN1-218ENST00000556343 HIST1H2BAQ96A08 127 aa6.97□□□□□ -1.29
ACTN1-218ENST00000556343 MRPL53Q96EL3 112 aaKnown RBP6.97□□□□□ -1.29
ACTN1-218ENST00000556343 MS4A6AQ9H2W1 248 aa6.97□□□□□ -1.29
ACTN1-218ENST00000556343 ZNF331Q9NQX6 463 aaPredicted RBP6.97□□□□□ -1.29
ACTN1-218ENST00000556343 IGKV3-7A0A075B6H7 116 aa6.96□□□□□ -1.3
ACTN1-218ENST00000556343 FBLL1A6NHQ2 334 aaKnown RBP6.96□□□□□ -1.3
ACTN1-218ENST00000556343 H3BTX0 84 aa6.96□□□□□ -1.3
ACTN1-218ENST00000556343 SNRPCP09234 159 aaKnown RBP6.96□□□□□ -1.3
ACTN1-218ENST00000556343 ICAM4Q14773 271 aa6.96□□□□□ -1.3
ACTN1-218ENST00000556343 GUCA2BQ16661 112 aa6.96□□□□□ -1.3
ACTN1-218ENST00000556343 CD300EQ496F6 205 aaPredicted RBP6.96□□□□□ -1.3
ACTN1-218ENST00000556343 PRR31Q5SQ13 230 aa6.96□□□□□ -1.3
ACTN1-218ENST00000556343 GBGT1Q8N5D6 347 aa6.96□□□□□ -1.3
ACTN1-218ENST00000556343 EIF4E3Q8N5X7 224 aaKnown RBP6.96□□□□□ -1.3
ACTN1-218ENST00000556343 C5orf17Q8NAS9 161 aa6.96□□□□□ -1.3
ACTN1-218ENST00000556343 RARRES2Q99969 163 aa6.96□□□□□ -1.3
ACTN1-218ENST00000556343 SLC35B3Q9H1N7 401 aa6.96□□□□□ -1.3
ACTN1-218ENST00000556343 YTHDF2Q9Y5A9 579 aaKnown RBP6.96□□□□□ -1.3
ACTN1-218ENST00000556343 FBN1P35555 2871 aaKnown RBP6.95□□□□□ -1.3
ACTN1-218ENST00000556343 TMEM250H0YL14 139 aa6.95□□□□□ -1.3
ACTN1-218ENST00000556343 NDUFB4O95168 129 aa6.95□□□□□ -1.3
ACTN1-218ENST00000556343 IGLV1-51P01701 117 aa6.95□□□□□ -1.3
ACTN1-218ENST00000556343 TFPI2P48307 235 aa6.95□□□□□ -1.3
ACTN1-218ENST00000556343 PSG3Q16557 428 aa6.95□□□□□ -1.3
ACTN1-218ENST00000556343 ADAMTSL5Q6ZMM2 481 aa6.95□□□□□ -1.3
ACTN1-218ENST00000556343 C17orf77Q96MU5 243 aa6.95□□□□□ -1.3
ACTN1-218ENST00000556343 LINC00052Q96N35 136 aa6.95□□□□□ -1.3
ACTN1-218ENST00000556343 EPDR1Q9UM22 224 aa6.95□□□□□ -1.3
ACTN1-218ENST00000556343 WNK1Q9H4A3 2382 aa6.94□□□□□ -1.3
ACTN1-218ENST00000556343 COL6A5A8TX70 2615 aa6.94□□□□□ -1.3
ACTN1-218ENST00000556343 K7EQG2 157 aa6.94□□□□□ -1.3
ACTN1-218ENST00000556343 EDN2P20800 178 aa6.94□□□□□ -1.3
ACTN1-218ENST00000556343 AKR1C3P42330 323 aa6.94□□□□□ -1.3
ACTN1-218ENST00000556343 ATP5G3P48201 142 aa6.94□□□□□ -1.3
ACTN1-218ENST00000556343 CNN1P51911 297 aaKnown RBP6.94□□□□□ -1.3
ACTN1-218ENST00000556343 FAM74A3Q4VXF1 159 aa6.94□□□□□ -1.3
ACTN1-218ENST00000556343 EBLN2Q6P2I7 272 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms