RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-219	ENST00000555906	SOHLH1	Q5JUK2	328 aa		13.92	□□□□□ -0.18
PRKCH-219	ENST00000555906	PXDC1	Q5TGL8	231 aa		13.92	□□□□□ -0.18
PRKCH-219	ENST00000555906	TEPP	Q6URK8	271 aa		13.92	□□□□□ -0.18
PRKCH-219	ENST00000555906	OR10P1	Q8NGE3	313 aa		13.92	□□□□□ -0.18
PRKCH-219	ENST00000555906	ARL6	Q9H0F7	186 aa		13.92	□□□□□ -0.18
PRKCH-219	ENST00000555906	TRAV12-2	A0A075B6T6	113 aa		13.91	□□□□□ -0.18
PRKCH-219	ENST00000555906	MRPS12	O15235	138 aa	Known RBP	13.91	□□□□□ -0.18
PRKCH-219	ENST00000555906	SCGB1D2	O95969	90 aa		13.91	□□□□□ -0.18
PRKCH-219	ENST00000555906	PRM2	P04554	102 aa		13.91	□□□□□ -0.18
PRKCH-219	ENST00000555906	ANXA7	P20073	488 aa	Known RBP	13.91	□□□□□ -0.18
PRKCH-219	ENST00000555906	PSG3	Q16557	428 aa		13.91	□□□□□ -0.18
PRKCH-219	ENST00000555906	IAH1	Q2TAA2	248 aa	Predicted RBP	13.91	□□□□□ -0.18
PRKCH-219	ENST00000555906	ZNF546	Q86UE3	836 aa		13.91	□□□□□ -0.18
PRKCH-219	ENST00000555906	ARV1	Q9H2C2	271 aa		13.91	□□□□□ -0.18
PRKCH-219	ENST00000555906	RCL1	Q9Y2P8	373 aa	Known RBP	13.91	□□□□□ -0.18
PRKCH-219	ENST00000555906	RHOB	P62745	196 aa		13.9	□□□□□ -0.18
PRKCH-219	ENST00000555906	LCN15	Q6UWW0	184 aa		13.9	□□□□□ -0.18
PRKCH-219	ENST00000555906	PATE2	Q6UY27	113 aa		13.9	□□□□□ -0.18
PRKCH-219	ENST00000555906	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.9	□□□□□ -0.18
PRKCH-219	ENST00000555906	LRRC20	Q8TCA0	184 aa		13.9	□□□□□ -0.18
PRKCH-219	ENST00000555906	CENPX	A8MT69	81 aa		13.89	□□□□□ -0.19
PRKCH-219	ENST00000555906	TAS2R60	P59551	318 aa		13.89	□□□□□ -0.19
PRKCH-219	ENST00000555906	MITD1	Q8WV92	249 aa		13.89	□□□□□ -0.19
PRKCH-219	ENST00000555906	C16orf74	Q96GX8	76 aa		13.89	□□□□□ -0.19
PRKCH-219	ENST00000555906	SDHC	Q99643	169 aa	Predicted RBP	13.89	□□□□□ -0.19
PRKCH-219	ENST00000555906	SLC50A1	Q9BRV3	221 aa		13.89	□□□□□ -0.19
PRKCH-219	ENST00000555906	GGACT	Q9BVM4	153 aa		13.89	□□□□□ -0.19
PRKCH-219	ENST00000555906	MUC4	Q99102	2169 aa		13.88	□□□□□ -0.19
PRKCH-219	ENST00000555906	DEFB130B	P0DP73	79 aa		13.88	□□□□□ -0.19
PRKCH-219	ENST00000555906	DEFB130A	P0DP74	79 aa		13.88	□□□□□ -0.19
PRKCH-219	ENST00000555906	AZU1	P20160	251 aa		13.88	□□□□□ -0.19
PRKCH-219	ENST00000555906	CNPY1	Q3B7I2	92 aa		13.88	□□□□□ -0.19
PRKCH-219	ENST00000555906	RPUSD4	Q96CM3	377 aa	Known RBP	13.88	□□□□□ -0.19
PRKCH-219	ENST00000555906	PPP1R14D	Q9NXH3	145 aa		13.88	□□□□□ -0.19
PRKCH-219	ENST00000555906	LINC00854	A0A1B0GVQ3	168 aa		13.87	□□□□□ -0.19
PRKCH-219	ENST00000555906	GOSR2	O14653	212 aa		13.87	□□□□□ -0.19
PRKCH-219	ENST00000555906	AGPAT2	O15120	278 aa		13.87	□□□□□ -0.19
PRKCH-219	ENST00000555906	ATP5G1	P05496	136 aa		13.87	□□□□□ -0.19
PRKCH-219	ENST00000555906	CDKN1B	P46527	198 aa		13.87	□□□□□ -0.19
PRKCH-219	ENST00000555906	ATP5G3	P48201	142 aa		13.87	□□□□□ -0.19
PRKCH-219	ENST00000555906	C1orf134	Q5TEV5	83 aa		13.87	□□□□□ -0.19
PRKCH-219	ENST00000555906	LINC00305	Q7Z4B0	112 aa		13.87	□□□□□ -0.19
PRKCH-219	ENST00000555906	LINC01587	Q99440	93 aa		13.87	□□□□□ -0.19
PRKCH-219	ENST00000555906	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKCH-219	ENST00000555906	RYR1	P21817	5038 aa		13.86	□□□□□ -0.19
PRKCH-219	ENST00000555906	IL7	P13232	177 aa		13.86	□□□□□ -0.19
PRKCH-219	ENST00000555906	ARL16	Q0P5N6	197 aa		13.86	□□□□□ -0.19
PRKCH-219	ENST00000555906	ATG101	Q9BSB4	218 aa		13.86	□□□□□ -0.19
PRKCH-219	ENST00000555906	GSKIP	Q9P0R6	139 aa		13.86	□□□□□ -0.19
PRKCH-219	ENST00000555906	C7orf66	A4D0T2	115 aa		13.85	□□□□□ -0.19
PRKCH-219	ENST00000555906		F5H768	121 aa		13.85	□□□□□ -0.19
PRKCH-219	ENST00000555906	COX7A2P2	O60397	106 aa		13.85	□□□□□ -0.19
PRKCH-219	ENST00000555906	MBP	P02686	304 aa	Predicted RBP	13.85	□□□□□ -0.19
PRKCH-219	ENST00000555906	ZNF493	Q6ZR52	646 aa		13.85	□□□□□ -0.19
PRKCH-219	ENST00000555906	BPIFA4P	Q86YQ2	179 aa		13.85	□□□□□ -0.19
PRKCH-219	ENST00000555906	RNASE8	Q8TDE3	154 aa	Known RBP	13.85	□□□□□ -0.19
PRKCH-219	ENST00000555906	TMEM263	Q8WUH6	116 aa	Known RBP	13.85	□□□□□ -0.19
PRKCH-219	ENST00000555906	C20orf144	Q9BQM9	153 aa		13.85	□□□□□ -0.19
PRKCH-219	ENST00000555906	C20orf85	Q9H1P6	137 aa		13.85	□□□□□ -0.19
PRKCH-219	ENST00000555906	CBY3	A6NI87	242 aa		13.84	□□□□□ -0.19
PRKCH-219	ENST00000555906	MGST2	Q99735	147 aa		13.84	□□□□□ -0.19
PRKCH-219	ENST00000555906	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.84	□□□□□ -0.19
PRKCH-219	ENST00000555906		H7BYZ3	331 aa		13.83	□□□□□ -0.2
PRKCH-219	ENST00000555906	FCN2	Q15485	313 aa		13.83	□□□□□ -0.2
PRKCH-219	ENST00000555906	ZNRF2	Q8NHG8	242 aa		13.83	□□□□□ -0.2
PRKCH-219	ENST00000555906	TMEM37	Q8WXS4	190 aa		13.83	□□□□□ -0.2
PRKCH-219	ENST00000555906		L7N2F9	121 aa		13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	SLC17A3	O00476	420 aa		13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	NUDT3	O95989	172 aa		13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	IGLC2	P0DOY2	106 aa		13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	PRB4	P10163	310 aa	Predicted RBP	13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	HTN1	P15515	57 aa		13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	VAMP2	P63027	116 aa		13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	ZNF846	Q147U1	533 aa		13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	OPCML	Q14982	345 aa		13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	MORN5	Q5VZ52	161 aa		13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	C10orf113	Q5VZT2	155 aa		13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	PXMP4	Q9Y6I8	212 aa		13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	HSPG2	P98160	4391 aa		13.82	□□□□□ -0.2
PRKCH-219	ENST00000555906	CCS	O14618	274 aa		13.81	□□□□□ -0.2
PRKCH-219	ENST00000555906	OR10J6P	Q8NGY7	276 aa		13.81	□□□□□ -0.2
PRKCH-219	ENST00000555906	RNF141	Q8WVD5	230 aa		13.81	□□□□□ -0.2
PRKCH-219	ENST00000555906	NOP10	Q9NPE3	64 aa	Known RBP	13.81	□□□□□ -0.2
PRKCH-219	ENST00000555906	NBDY	A0A0U1RRE5	68 aa		13.8	□□□□□ -0.2
PRKCH-219	ENST00000555906	CAMLG	P49069	296 aa		13.8	□□□□□ -0.2
PRKCH-219	ENST00000555906	CCL18	P55774	89 aa		13.8	□□□□□ -0.2
PRKCH-219	ENST00000555906	RAB31	Q13636	194 aa		13.8	□□□□□ -0.2
PRKCH-219	ENST00000555906	GFI1B	Q5VTD9	330 aa		13.8	□□□□□ -0.2
PRKCH-219	ENST00000555906	ZNF575	Q86XF7	245 aa		13.8	□□□□□ -0.2
PRKCH-219	ENST00000555906	ODF3	Q96PU9	254 aa		13.8	□□□□□ -0.2
PRKCH-219	ENST00000555906	PRAC2	D3DTV9	90 aa		13.79	□□□□□ -0.2
PRKCH-219	ENST00000555906	LYRM1	O43325	122 aa		13.79	□□□□□ -0.2
PRKCH-219	ENST00000555906	SNRPC	P09234	159 aa	Known RBP	13.79	□□□□□ -0.2
PRKCH-219	ENST00000555906	KIR3DS1	Q14943	382 aa		13.79	□□□□□ -0.2
PRKCH-219	ENST00000555906	GUK1	Q16774	197 aa		13.79	□□□□□ -0.2
PRKCH-219	ENST00000555906		Q6ZRG5	221 aa		13.79	□□□□□ -0.2
PRKCH-219	ENST00000555906	LINC00612	Q8N6U2	182 aa		13.79	□□□□□ -0.2
PRKCH-219	ENST00000555906	SAT2	Q96F10	170 aa	Predicted RBP	13.79	□□□□□ -0.2
PRKCH-219	ENST00000555906	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.79	□□□□□ -0.2
PRKCH-219	ENST00000555906	C11orf1	Q9H5F2	150 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms