RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PARLQ9H300 379 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 OR51M1Q9H341 326 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 SDF2L1Q9HCN8 221 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 DOK5Q9P104 306 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 DMRT1Q9Y5R6 373 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 DMBT1Q9UGM3 2413 aaPredicted RBP5.32□□□□□ -1.56
SLIRP-204ENST00000555890 A0A1W2PRE2 83 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 PSMB11A5LHX3 300 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 A8MZ25 164 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 AP4M1O00189 453 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 MT-ND4LP03901 98 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 EGR2P11161 476 aaPredicted RBP5.31□□□□□ -1.56
SLIRP-204ENST00000555890 PSG1P11464 419 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 S100A7P31151 101 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 ATP5G3P48201 142 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 YPEL3P61236 119 aaPredicted RBP5.31□□□□□ -1.56
SLIRP-204ENST00000555890 UBE2L3P68036 154 aaKnown RBP5.31□□□□□ -1.56
SLIRP-204ENST00000555890 ECSCRQ19T08 205 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 Q56UQ5 140 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 KLF17Q5JT82 389 aaPredicted RBP5.31□□□□□ -1.56
SLIRP-204ENST00000555890 PATE2Q6UY27 113 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 LINC00305Q7Z4B0 112 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 CBLN2Q8IUK8 224 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 OR5AU1Q8NGC0 362 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 VN1R17PQ8TDU5 208 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 HSPB9Q9BQS6 159 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 PAXXQ9BUH6 204 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 SLC25A2Q9BXI2 301 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 ZNF355PQ9NSJ1 428 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 C21orf62Q9NYP8 219 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 RNF24Q9Y225 148 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 HIGD1AQ9Y241 93 aa5.31□□□□□ -1.56
SLIRP-204ENST00000555890 TRAV5A0A0B4J249 113 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 TRAV41A0A0B4J266 112 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 A6NDX4 124 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 CXorf65A6NEN9 183 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 H3BUX3 64 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 ATP6V0E1O15342 81 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 OR2J3O76001 311 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 NDUFB4O95168 129 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 NDUFB8O95169 186 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 TOMM40O96008 361 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 FCGR2BP31994 310 aaPredicted RBP5.3□□□□□ -1.56
SLIRP-204ENST00000555890 AKR1C3P42330 323 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 LYZP61626 148 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 NDPQ00604 133 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 KIAA0141Q14154 515 aaPredicted RBP5.3□□□□□ -1.56
SLIRP-204ENST00000555890 ADIRFQ15847 76 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 LY6EQ16553 131 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 KLK9Q2XQG4 91 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 BEAN1Q3B7T3 259 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 C9orf152Q5JTZ5 239 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 Q6ZWC4 215 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 TMEM219Q86XT9 240 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 TEX29Q8N6K0 151 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 NECAP1Q8NC96 275 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 PIFOQ8TCI5 191 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 C2CD4CQ8TF44 421 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 FAM167A-AS1Q96KT0 104 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 TMEM242Q9NWH2 141 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 KLK9Q9UKQ9 250 aa5.3□□□□□ -1.56
SLIRP-204ENST00000555890 YTHDF2Q9Y5A9 579 aaKnown RBP5.3□□□□□ -1.56
SLIRP-204ENST00000555890 WI2-2373I1.2A0A1W2PRP0 233 aa5.29□□□□□ -1.56
SLIRP-204ENST00000555890 G3V4G9 280 aa5.29□□□□□ -1.56
SLIRP-204ENST00000555890 CLDN34H7C241 214 aa5.29□□□□□ -1.56
SLIRP-204ENST00000555890 IGKV1-17P01599 117 aa5.29□□□□□ -1.56
SLIRP-204ENST00000555890 OR10J4P0C629 311 aa5.29□□□□□ -1.56
SLIRP-204ENST00000555890 CRIP2P52943 208 aaPredicted RBP5.29□□□□□ -1.56
SLIRP-204ENST00000555890 TMEM190Q8WZ59 177 aa5.29□□□□□ -1.56
SLIRP-204ENST00000555890 C11orf52Q96A22 123 aa5.29□□□□□ -1.56
SLIRP-204ENST00000555890 EEF1AKMT3Q96AZ1 226 aa5.29□□□□□ -1.56
SLIRP-204ENST00000555890 ZNF503Q96F45 646 aa5.29□□□□□ -1.56
SLIRP-204ENST00000555890 TCEAL7Q9BRU2 100 aa5.29□□□□□ -1.56
SLIRP-204ENST00000555890 MRPL27Q9P0M9 148 aaKnown RBP5.29□□□□□ -1.56
SLIRP-204ENST00000555890 TMEM14CQ9P0S9 112 aa5.29□□□□□ -1.56
SLIRP-204ENST00000555890 TRBV7-1A0A0A6YYK4 115 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 TRBV9A0A0B4J1U6 114 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 HELTA6NFD8 242 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 FAM223BA6NKX1 122 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 COLCA2A8K830 154 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 PPP1R2P9O14990 202 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 IGHG2P01859 326 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 IL4P05112 153 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 NBEAP1P0C6P0 100 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 PYYP10082 97 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 HIST1H1EP10412 219 aaKnown RBP5.28□□□□□ -1.56
SLIRP-204ENST00000555890 NPPCP23582 126 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 S100PP25815 95 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 RPL23P62829 140 aaKnown RBP5.28□□□□□ -1.56
SLIRP-204ENST00000555890 RHOGP84095 191 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 ATP5G2Q06055 141 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 RNF212Q495C1 297 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 MORN5Q5VZ52 161 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 Q6ZSN1 163 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 FAM223AQ8IWN6 122 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 ZNF491Q8N8L2 437 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 OR5R1Q8NH85 324 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 FXYD5Q96DB9 178 aa5.28□□□□□ -1.56
SLIRP-204ENST00000555890 OR5B12Q96R08 314 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms