RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 DEFB131BA0A096LNP1 70 aa6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 SMCO3A2RU48 225 aa6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 K7EPK0 472 aa6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 CRXO43186 299 aaPredicted RBP6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 SCGB1D2O95969 90 aa6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 MBPP02686 304 aaPredicted RBP6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 ID1P41134 155 aa6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 GALR1P47211 349 aa6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 MEOX2P50222 304 aa6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 ZNF431Q8TF32 576 aaPredicted RBP6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 C16orf92Q96LL3 132 aa6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 RNF126Q9BV68 326 aa6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 TMEM147Q9BVK8 224 aa6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 DKK2Q9UBU2 259 aa6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 PFDN2Q9UHV9 154 aa6.63□□□□□ -1.35
VIPAS39-207ENST00000555854 TRAV6A0A075B6T7 132 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 IGHV3OR16-12A0A075B7B8 117 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 A0A087X0K7 114 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 M0R2Z0 102 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 SSNA1O43805 119 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 TSC22D2O75157 780 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 IFNA7P01567 189 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 PRM2P04554 102 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 GIPP09681 153 aaPredicted RBP6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 CNN1P51911 297 aaKnown RBP6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 EMP1P54849 157 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 PSG9Q00887 426 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 FAM222AQ5U5X8 452 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 MORN5Q5VZ52 161 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 SPATA31B1PQ5VZV4 182 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 OR11H7Q8NGC8 314 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 MGST2Q99735 147 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 SEC22CQ9BRL7 303 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 RPRMQ9NS64 109 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 HIGD1AQ9Y241 93 aa6.62□□□□□ -1.35
VIPAS39-207ENST00000555854 PLAC8L1A1L4L8 177 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 HMSDA8MTL9 139 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 FNDC10F2Z333 226 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 IFNA21P01568 189 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 CXCL3P19876 107 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 TAS2R30P59541 319 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 FCN2Q15485 313 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 SPINK13Q1W4C9 94 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 SAMD13Q5VXD3 122 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 EBLN2Q6P2I7 272 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 BAP18Q8IXM2 172 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 IGF2BP2-AS1Q96M15 143 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 GPR82Q96P67 336 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 RFNGQ9Y644 331 aa6.61□□□□□ -1.35
VIPAS39-207ENST00000555854 LOC102723971A0A1B0GUV8 181 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 SMIM9A6NGZ8 99 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 SLC17A3O00476 420 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 HYPMO75409 117 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 SNRPCP09234 159 aaKnown RBP6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 OR5G3P0C626 314 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 SPART-AS1P0CW21 52 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 NKX2-5P52952 324 aaPredicted RBP6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 SELENOTP62341 195 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 FGL1Q08830 312 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 IL15RAQ13261 267 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 TMEM37Q8WXS4 190 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 ARL6Q9H0F7 186 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 ARV1Q9H2C2 271 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 GSKIPQ9P0R6 139 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 GOLT1BQ9Y3E0 138 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 HSPB11Q9Y547 144 aa6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 YTHDF2Q9Y5A9 579 aaKnown RBP6.6□□□□□ -1.35
VIPAS39-207ENST00000555854 TRAV12-2A0A075B6T6 113 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 TMEM189A5PLL7 270 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 AGPAT2O15120 278 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 INSP01308 110 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 RPL7P18124 248 aaKnown RBP6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 RAB14P61106 215 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 TEPPQ6URK8 271 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 ZNF546Q86UE3 836 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 C9orf62Q8N4C0 152 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 ZNF738Q8NE65 137 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 OR10P1Q8NGE3 313 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 NPVFQ9HCQ7 196 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 MGAT4CQ9UBM8 478 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 LSM5Q9Y4Y9 91 aaKnown RBP6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 NACAE9PAV3 2078 aa6.59□□□□□ -1.35
VIPAS39-207ENST00000555854 IGSF23A1L1A6 192 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 LINC00862A6NCI5 91 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 FAM24AA6NFZ4 105 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 ZNF705GA8MUZ8 300 aaPredicted RBP6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 PRAC2D3DTV9 90 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 H3BTX0 84 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 HBE1P02100 147 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 IGLC2P0DOY2 106 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 AZU1P20160 251 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 CYCSP99999 105 aaKnown RBP6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 HIST1H1AQ02539 215 aaPredicted RBP6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 KIR3DS1Q14943 382 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 OPCMLQ14982 345 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 PSG3Q16557 428 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 RRN3P1Q2M238 152 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 VWC2Q2TAL6 325 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 TEX261Q6UWH6 196 aa6.58□□□□□ -1.36
VIPAS39-207ENST00000555854 LINC00305Q7Z4B0 112 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms