RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 LSM5Q9Y4Y9 91 aaKnown RBP8.49□□□□□ -1.05
VRK1-204ENST00000555351 DEFB131BA0A096LNP1 70 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 COX7A2P2O60397 106 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 PRAF2O60831 178 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 CXCL3P19876 107 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 RPL29P47914 159 aaKnown RBP8.48□□□□□ -1.05
VRK1-204ENST00000555351 BCAP31P51572 246 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 PRR20EP86478 221 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 PRR20CP86479 221 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 PRR20DP86480 221 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 PRR20BP86481 221 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 PRR20AP86496 221 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 GUK1Q16774 197 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 RRN3P1Q2M238 152 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 C10orf113Q5VZT2 155 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 Q6ZRG5 221 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 STX12Q86Y82 276 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 ZNF738Q8NE65 137 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 OR11H7Q8NGC8 314 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 OR1L4Q8NGR5 311 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 ENKURQ8TC29 256 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 LRRC20Q8TCA0 184 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 PFDN5Q99471 154 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 DNAJC4Q9NNZ3 241 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 DKK2Q9UBU2 259 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 HYDINQ4G0P3 5121 aa8.48□□□□□ -1.05
VRK1-204ENST00000555351 IGHV4-4A0A075B6R2 117 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 IGHV3OR16-12A0A075B7B8 117 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 MPDU1O75352 247 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 CST7O76096 145 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 INSP01308 110 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 TSPOP30536 169 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 FXYD7P58549 80 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 FGL1Q08830 312 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 RAB32Q13637 225 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 NRARPQ7Z6K4 114 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 TMEM256Q8N2U0 113 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 RNF182Q8N6D2 247 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 TMEM252Q8N6L7 170 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 OR8A1Q8NGG7 326 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 TMEM37Q8WXS4 190 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 ZNF331Q9NQX6 463 aaPredicted RBP8.47□□□□□ -1.05
VRK1-204ENST00000555351 PXMP4Q9Y6I8 212 aa8.47□□□□□ -1.05
VRK1-204ENST00000555351 LOC102723971A0A1B0GUV8 181 aa8.46□□□□□ -1.06
VRK1-204ENST00000555351 FAM24AA6NFZ4 105 aa8.46□□□□□ -1.06
VRK1-204ENST00000555351 BOLA2-SMG1P6H3BVE0 249 aa8.46□□□□□ -1.06
VRK1-204ENST00000555351 CRXO43186 299 aaPredicted RBP8.46□□□□□ -1.06
VRK1-204ENST00000555351 ZNF253O75346 499 aa8.46□□□□□ -1.06
VRK1-204ENST00000555351 S100A10P60903 97 aa8.46□□□□□ -1.06
VRK1-204ENST00000555351 CYCSP99999 105 aaKnown RBP8.46□□□□□ -1.06
VRK1-204ENST00000555351 NIPSNAP3BQ9BS92 247 aa8.46□□□□□ -1.06
VRK1-204ENST00000555351 NMES1Q9C002 83 aa8.46□□□□□ -1.06
VRK1-204ENST00000555351 IGSF23A1L1A6 192 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 LYRM9A8MSI8 78 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 RLN2P04090 185 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 IGLC2P0DOY2 106 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 OPCMLQ14982 345 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 SPINK13Q1W4C9 94 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 FAM222AQ5U5X8 452 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 IGFL4Q6B9Z1 124 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 RPP25LQ8N5L8 163 aaKnown RBP8.45□□□□□ -1.06
VRK1-204ENST00000555351 RPUSD4Q96CM3 377 aaKnown RBP8.45□□□□□ -1.06
VRK1-204ENST00000555351 SAT2Q96F10 170 aaPredicted RBP8.45□□□□□ -1.06
VRK1-204ENST00000555351 C20orf144Q9BQM9 153 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 MARVELD1Q9BSK0 173 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 TMEM208Q9BTX3 173 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 NDUFAF3Q9BU61 184 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 SLC25A31Q9H0C2 315 aa8.45□□□□□ -1.06
VRK1-204ENST00000555351 E5RGE8 158 aa8.44□□□□□ -1.06
VRK1-204ENST00000555351 P0DMU3 169 aa8.44□□□□□ -1.06
VRK1-204ENST00000555351 FAM231AP0DMU4 169 aa8.44□□□□□ -1.06
VRK1-204ENST00000555351 FAM231CP0DMU5 169 aa8.44□□□□□ -1.06
VRK1-204ENST00000555351 HIST1H1AQ02539 215 aaPredicted RBP8.44□□□□□ -1.06
VRK1-204ENST00000555351 MIC13Q5XKP0 118 aa8.44□□□□□ -1.06
VRK1-204ENST00000555351 BATF3Q9NR55 127 aa8.44□□□□□ -1.06
VRK1-204ENST00000555351 SLC39A9Q9NUM3 307 aa8.44□□□□□ -1.06
VRK1-204ENST00000555351 YTHDF2Q9Y5A9 579 aaKnown RBP8.44□□□□□ -1.06
VRK1-204ENST00000555351 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
VRK1-204ENST00000555351 UBE2L5PA0A1B0GUS4 154 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 INMT-MINDY4F8WBC2 141 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 M0R2Z0 102 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 CDKN1BP46527 198 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 EMP1P54849 157 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 TAS2R60P59551 318 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 DEFA1P59665 94 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 DEFA3P59666 94 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 RHOBP62745 196 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 IFITM3Q01628 133 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 BAXQ07812 192 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 MORN5Q5VZ52 161 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 ZNF493Q6ZR52 646 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 MRPL53Q96EL3 112 aaKnown RBP8.43□□□□□ -1.06
VRK1-204ENST00000555351 ODF3Q96PU9 254 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 PPP1R14DQ9NXH3 145 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 TMEM14CQ9P0S9 112 aa8.43□□□□□ -1.06
VRK1-204ENST00000555351 PDE6HQ13956 83 aa8.42□□□□□ -1.06
VRK1-204ENST00000555351 ZNF767PQ75MW2 155 aa8.42□□□□□ -1.06
VRK1-204ENST00000555351 OR10J6PQ8NGY7 276 aa8.42□□□□□ -1.06
VRK1-204ENST00000555351 KCNIP2Q9NS61 270 aa8.42□□□□□ -1.06
VRK1-204ENST00000555351 H3BQ15 152 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms