RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 TRAV3A0A0B4J244 114 aa3.21□□□□□ -1.9
FCF1-207ENST00000554973 OR2T8A6NH00 312 aa3.21□□□□□ -1.9
FCF1-207ENST00000554973 UQCRQO14949 82 aa3.21□□□□□ -1.9
FCF1-207ENST00000554973 NCR2O95944 276 aa3.21□□□□□ -1.9
FCF1-207ENST00000554973 MGST1P10620 155 aaKnown RBP3.21□□□□□ -1.9
FCF1-207ENST00000554973 FOXA3P55318 350 aaPredicted RBP3.21□□□□□ -1.9
FCF1-207ENST00000554973 RRAS2P62070 204 aaPredicted RBP3.21□□□□□ -1.9
FCF1-207ENST00000554973 SELENOWP63302 87 aa3.21□□□□□ -1.9
FCF1-207ENST00000554973 MRPS36P82909 103 aaKnown RBP3.21□□□□□ -1.9
FCF1-207ENST00000554973 LINC00471Q8N535 108 aa3.21□□□□□ -1.9
FCF1-207ENST00000554973 ARL11Q969Q4 196 aa3.21□□□□□ -1.9
FCF1-207ENST00000554973 CXCL16Q9H2A7 254 aa3.21□□□□□ -1.9
FCF1-207ENST00000554973 LY96Q9Y6Y9 160 aa3.21□□□□□ -1.9
FCF1-207ENST00000554973 NUMA1Q14980 2115 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 DIDO1Q9BTC0 2240 aaKnown RBP3.2□□□□□ -1.9
FCF1-207ENST00000554973 KDM6AO15550 1401 aaPredicted RBP3.2□□□□□ -1.9
FCF1-207ENST00000554973 TNS3Q68CZ2 1445 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 TRAV1-1A0A0B4J248 108 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 MIF4GDA9UHW6 222 aaKnown RBP3.2□□□□□ -1.9
FCF1-207ENST00000554973 IBA57-AS1B1ANH7 110 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 E7EQL1 145 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 C17orf112F2Z3M2 114 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 LYRM1O43325 122 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 PROSCO94903 275 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 TCRAP04437 139 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 MIFP14174 115 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 CDK5R1Q15078 307 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 ZNF181Q2M3W8 571 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 TP53RKQ96S44 253 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 NIT2Q9NQR4 276 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 TNFSF18Q9UNG2 199 aa3.2□□□□□ -1.9
FCF1-207ENST00000554973 MYO9BQ13459 2157 aa3.19□□□□□ -1.9
FCF1-207ENST00000554973 ZNF727A8MUV8 499 aa3.19□□□□□ -1.9
FCF1-207ENST00000554973 SMIM24O75264 130 aa3.19□□□□□ -1.9
FCF1-207ENST00000554973 GPX1P07203 203 aa3.19□□□□□ -1.9
FCF1-207ENST00000554973 IGLC6P0CF74 106 aa3.19□□□□□ -1.9
FCF1-207ENST00000554973 FABP4P15090 132 aa3.19□□□□□ -1.9
FCF1-207ENST00000554973 ROMO1P60602 79 aa3.19□□□□□ -1.9
FCF1-207ENST00000554973 RPL26P61254 145 aaKnown RBP3.19□□□□□ -1.9
FCF1-207ENST00000554973 HES1Q14469 280 aa3.19□□□□□ -1.9
FCF1-207ENST00000554973 CTAGE3PQ8IX95 158 aa3.19□□□□□ -1.9
FCF1-207ENST00000554973 POP5Q969H6 163 aaKnown RBP3.19□□□□□ -1.9
FCF1-207ENST00000554973 SLC50A1Q9BRV3 221 aa3.19□□□□□ -1.9
FCF1-207ENST00000554973 LINC00470Q9BZP3 86 aa3.19□□□□□ -1.9
FCF1-207ENST00000554973 RPL26L1Q9UNX3 145 aaKnown RBP3.19□□□□□ -1.9
FCF1-207ENST00000554973 LHFPL6Q9Y693 200 aa3.19□□□□□ -1.9
FCF1-207ENST00000554973 KDM5CP41229 1560 aa3.18□□□□□ -1.9
FCF1-207ENST00000554973 K7ERU9 68 aa3.18□□□□□ -1.9
FCF1-207ENST00000554973 HBDP02042 147 aa3.18□□□□□ -1.9
FCF1-207ENST00000554973 LINC00694P0DN24 101 aa3.18□□□□□ -1.9
FCF1-207ENST00000554973 TPT1P13693 172 aaKnown RBP3.18□□□□□ -1.9
FCF1-207ENST00000554973 LSM3P62310 102 aaKnown RBP3.18□□□□□ -1.9
FCF1-207ENST00000554973 WHAMMP3Q1A5X7 153 aa3.18□□□□□ -1.9
FCF1-207ENST00000554973 HAGHLQ6PII5 290 aaPredicted RBP3.18□□□□□ -1.9
FCF1-207ENST00000554973 CCL4L1Q8NHW4 92 aa3.18□□□□□ -1.9
FCF1-207ENST00000554973 PTPRGP23470 1445 aa3.18□□□□□ -1.9
FCF1-207ENST00000554973 SMG6Q86US8 1419 aaKnown RBP3.18□□□□□ -1.9
FCF1-207ENST00000554973 ZFC3H1O60293 1989 aaKnown RBP3.18□□□□□ -1.9
FCF1-207ENST00000554973 RIMS1Q86UR5 1692 aaKnown RBP3.17□□□□□ -1.9
FCF1-207ENST00000554973 SPEF2Q9C093 1822 aa3.17□□□□□ -1.9
FCF1-207ENST00000554973 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.17□□□□□ -1.9
FCF1-207ENST00000554973 ZNF705FA8MVS1 300 aaPredicted RBP3.17□□□□□ -1.9
FCF1-207ENST00000554973 IGLV1-51P01701 117 aa3.17□□□□□ -1.9
FCF1-207ENST00000554973 IGLV3-19P01714 112 aa3.17□□□□□ -1.9
FCF1-207ENST00000554973 SLC25A5P05141 298 aaKnown RBP3.17□□□□□ -1.9
FCF1-207ENST00000554973 ZNF93P35789 620 aaPredicted RBP3.17□□□□□ -1.9
FCF1-207ENST00000554973 AKR1D1P51857 326 aa3.17□□□□□ -1.9
FCF1-207ENST00000554973 COPZ1P61923 177 aa3.17□□□□□ -1.9
FCF1-207ENST00000554973 DIAPH2-AS1Q14236 149 aa3.17□□□□□ -1.9
FCF1-207ENST00000554973 Q8N814 137 aa3.17□□□□□ -1.9
FCF1-207ENST00000554973 OR10AC1Q8NH08 325 aa3.17□□□□□ -1.9
FCF1-207ENST00000554973 SDK2Q58EX2 2172 aa3.17□□□□□ -1.9
FCF1-207ENST00000554973 GLI3P10071 1580 aa3.17□□□□□ -1.9
FCF1-207ENST00000554973 ROCK2O75116 1388 aaKnown RBP3.16□□□□□ -1.9
FCF1-207ENST00000554973 NPFFO15130 113 aa3.16□□□□□ -1.9
FCF1-207ENST00000554973 UBL3O95164 117 aa3.16□□□□□ -1.9
FCF1-207ENST00000554973 SAA1P0DJI8 122 aaPredicted RBP3.16□□□□□ -1.9
FCF1-207ENST00000554973 RNASE2P10153 161 aaKnown RBP3.16□□□□□ -1.9
FCF1-207ENST00000554973 EMX2Q04743 252 aa3.16□□□□□ -1.9
FCF1-207ENST00000554973 NEDD8Q15843 81 aa3.16□□□□□ -1.9
FCF1-207ENST00000554973 RNASE10Q5GAN6 216 aaKnown RBP3.16□□□□□ -1.9
FCF1-207ENST00000554973 TMEM91Q6ZNR0 172 aa3.16□□□□□ -1.9
FCF1-207ENST00000554973 C9orf163Q8N9P6 203 aa3.16□□□□□ -1.9
FCF1-207ENST00000554973 HYLS1Q96M11 299 aa3.16□□□□□ -1.9
FCF1-207ENST00000554973 TPRKBQ9Y3C4 175 aa3.16□□□□□ -1.9
FCF1-207ENST00000554973 ADAMTS7Q9UKP4 1686 aa3.16□□□□□ -1.9
FCF1-207ENST00000554973 NALCNQ8IZF0 1738 aa3.16□□□□□ -1.9
FCF1-207ENST00000554973 MYLKQ15746 1914 aa3.15□□□□□ -1.9
FCF1-207ENST00000554973 TANC2Q9HCD6 1990 aa3.15□□□□□ -1.91
FCF1-207ENST00000554973 IGKV2D-26A0A0A0MRZ7 120 aa3.15□□□□□ -1.91
FCF1-207ENST00000554973 hDV103S1A0JD37 113 aa3.15□□□□□ -1.91
FCF1-207ENST00000554973 FAM92AA1XBS5 289 aa3.15□□□□□ -1.91
FCF1-207ENST00000554973 F8W036 122 aa3.15□□□□□ -1.91
FCF1-207ENST00000554973 GNG7O60262 68 aa3.15□□□□□ -1.91
FCF1-207ENST00000554973 HLA-DRB4P13762 266 aa3.15□□□□□ -1.91
FCF1-207ENST00000554973 SSR2P43308 183 aa3.15□□□□□ -1.91
FCF1-207ENST00000554973 OR2T35Q8NGX2 323 aa3.15□□□□□ -1.91
FCF1-207ENST00000554973 TMEM203Q969S6 136 aa3.15□□□□□ -1.91
FCF1-207ENST00000554973 TIMM21Q9BVV7 248 aa3.15□□□□□ -1.91
FCF1-207ENST00000554973 HLA-DRB4X5D2U9 266 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms