RNA–Protein interactions for RNA: ENST00000554732.5

LINC00639-202, long intergenic non-protein coding RNA 639, humanhuman

TSL 1 (best)

Gene LINC00639, Length 4,364 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-202ENST00000554732 FXYD2P54710 66 aa11.15□□□□□ -0.62
LINC00639-202ENST00000554732 SRSF1Q07955 248 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC00639-202ENST00000554732 KIR2DL4Q99706 377 aa11.15□□□□□ -0.62
LINC00639-202ENST00000554732 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.62
LINC00639-202ENST00000554732 ZNRD1Q9P1U0 126 aa11.15□□□□□ -0.62
LINC00639-202ENST00000554732 PLXNB3Q9ULL4 1909 aa11.15□□□□□ -0.62
LINC00639-202ENST00000554732 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.14□□□□□ -0.63
LINC00639-202ENST00000554732 SIGLEC8Q9NYZ4 499 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 IGLV3-12A0A075B6K2 115 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 C2orf70A6NJV1 201 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 IGLV3-1P01715 115 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 SSBP2P81877 361 aaPredicted RBP11.14□□□□□ -0.63
LINC00639-202ENST00000554732 SMPXQ9UHP9 88 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 ERG28Q9UKR5 140 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 GAGE12JA6NER3 117 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 GAGE7O76087 117 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 ZNF883P0CG24 379 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 GAGE12FP0CL80 117 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 GAGE12GP0CL81 117 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 GAGE12IP0CL82 117 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 GAGE4Q13068 117 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 PPDPFLQ8WWR9 84 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 LGALS9BQ3B8N2 356 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 IGFL4Q6B9Z1 124 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 LGALS9CQ6DKI2 356 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 MRPL14Q6P1L8 145 aaKnown RBP11.14□□□□□ -0.63
LINC00639-202ENST00000554732 FAM231DQ6ZW35 169 aa11.14□□□□□ -0.63
LINC00639-202ENST00000554732 C17orf82Q86X59 251 aaPredicted RBP11.14□□□□□ -0.63
LINC00639-202ENST00000554732 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
LINC00639-202ENST00000554732 CD177Q8N6Q3 437 aa11.13□□□□□ -0.63
LINC00639-202ENST00000554732 C3orf56Q8N813 242 aa11.13□□□□□ -0.63
LINC00639-202ENST00000554732 FRMPD3Q5JV73 1810 aa11.13□□□□□ -0.63
LINC00639-202ENST00000554732 PINLYPA6NC86 204 aa11.13□□□□□ -0.63
LINC00639-202ENST00000554732 C8orf46Q8TAG6 207 aa11.13□□□□□ -0.63
LINC00639-202ENST00000554732 UTRNP46939 3433 aa11.13□□□□□ -0.63
LINC00639-202ENST00000554732 KLF5Q13887 457 aaPredicted RBP11.13□□□□□ -0.63
LINC00639-202ENST00000554732 C12orf74Q32Q52 190 aa11.12□□□□□ -0.63
LINC00639-202ENST00000554732 C16orf54Q6UWD8 224 aa11.12□□□□□ -0.63
LINC00639-202ENST00000554732 Q86TA4 180 aa11.12□□□□□ -0.63
LINC00639-202ENST00000554732 KIAA1671Q9BY89 1806 aa11.12□□□□□ -0.63
LINC00639-202ENST00000554732 PRSS29PA6NIE9 313 aa11.12□□□□□ -0.63
LINC00639-202ENST00000554732 FOXL2NBQ6ZUU3 175 aa11.12□□□□□ -0.63
LINC00639-202ENST00000554732 ZCCHC24Q8N2G6 241 aaKnown RBP11.12□□□□□ -0.63
LINC00639-202ENST00000554732 LAGE3Q14657 143 aa11.12□□□□□ -0.63
LINC00639-202ENST00000554732 CEND1Q8N111 149 aa11.12□□□□□ -0.63
LINC00639-202ENST00000554732 RNF125Q96EQ8 232 aa11.12□□□□□ -0.63
LINC00639-202ENST00000554732 CEP350Q5VT06 3117 aa11.12□□□□□ -0.63
LINC00639-202ENST00000554732 ZNF562Q6V9R5 426 aa11.12□□□□□ -0.63
LINC00639-202ENST00000554732 SLC25A39Q9BZJ4 359 aaPredicted RBP11.12□□□□□ -0.63
LINC00639-202ENST00000554732 PCNX2A6NKB5 2137 aa11.11□□□□□ -0.63
LINC00639-202ENST00000554732 IGHV1-2P23083 117 aa11.11□□□□□ -0.63
LINC00639-202ENST00000554732 NPC2P61916 151 aa11.11□□□□□ -0.63
LINC00639-202ENST00000554732 ZNF56Q15929 161 aa11.11□□□□□ -0.63
LINC00639-202ENST00000554732 MRPL35Q9NZE8 188 aaKnown RBP11.11□□□□□ -0.63
LINC00639-202ENST00000554732 A0A0C4DFX4 3053 aa11.11□□□□□ -0.63
LINC00639-202ENST00000554732 A0A0U1RRA0 63 aa11.11□□□□□ -0.63
LINC00639-202ENST00000554732 C1QTNF4Q9BXJ3 329 aa11.11□□□□□ -0.63
LINC00639-202ENST00000554732 SH2D1AO60880 128 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 RNASE1P07998 156 aaKnown RBP11.1□□□□□ -0.63
LINC00639-202ENST00000554732 C20orf78Q9BR46 151 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 PRR20EP86478 221 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 PRR20CP86479 221 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 PRR20DP86480 221 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 PRR20BP86481 221 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 PRR20AP86496 221 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 ZNF295-AS1Q8N0V1 137 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 TNFRSF6BO95407 300 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 FAM104BQ5XKR9 115 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 C2orf82Q6UX34 121 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 Q6ZR03 302 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 C8orf86Q6ZUL3 223 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 TMEM133Q9H2Q1 129 aa11.1□□□□□ -0.63
LINC00639-202ENST00000554732 NDUFS7O75251 213 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 LINC01545Q5VT33 79 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 TRBV25-1A0A075B6N4 114 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 IGLL5B9A064 214 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 NPYP01303 97 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 IFITM1P13164 125 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 OR10J6PQ8NGY7 276 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 MRPL51Q4U2R6 128 aaKnown RBP11.09□□□□□ -0.63
LINC00639-202ENST00000554732 GFRA4Q9GZZ7 299 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 ZFHX2Q9C0A1 2572 aaPredicted RBP11.09□□□□□ -0.63
LINC00639-202ENST00000554732 AHRRA9YTQ3 701 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 MEIG1Q5JSS6 88 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 FOXI2Q6ZQN5 318 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 Q6ZT83 130 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 WIPF2Q8TF74 440 aaPredicted RBP11.09□□□□□ -0.63
LINC00639-202ENST00000554732 GLMPQ8WWB7 406 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 SPAG8Q99932 426 aaPredicted RBP11.09□□□□□ -0.63
LINC00639-202ENST00000554732 EDA2RQ9HAV5 297 aa11.09□□□□□ -0.63
LINC00639-202ENST00000554732 HERV-K104P63124 156 aa11.08□□□□□ -0.64
LINC00639-202ENST00000554732 MORN5Q5VZ52 161 aa11.08□□□□□ -0.64
LINC00639-202ENST00000554732 Q6ZPA2 131 aa11.08□□□□□ -0.64
LINC00639-202ENST00000554732 COLCA1Q6ZS62 124 aa11.08□□□□□ -0.64
LINC00639-202ENST00000554732 RNF183Q96D59 192 aa11.08□□□□□ -0.64
LINC00639-202ENST00000554732 FAM120AOSQ5T036 256 aa11.08□□□□□ -0.64
LINC00639-202ENST00000554732 C9orf153Q5TBE3 101 aa11.08□□□□□ -0.64
LINC00639-202ENST00000554732 ABHD17AQ96GS6 310 aa11.08□□□□□ -0.64
LINC00639-202ENST00000554732 PLXNA2O75051 1894 aa11.08□□□□□ -0.64
LINC00639-202ENST00000554732 PLNP26678 52 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms