RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 A0A0B4J2E0 115 aa2.73□□□□□ -1.97
SYNE2-212ENST00000554584 ETDCA0A1B0GVM5 59 aa2.73□□□□□ -1.97
SYNE2-212ENST00000554584 A0A1B0GX12 115 aa2.73□□□□□ -1.97
SYNE2-212ENST00000554584 TMEM54Q969K7 222 aa2.73□□□□□ -1.97
SYNE2-212ENST00000554584 SMR3AQ99954 134 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 RPRMQ9NS64 109 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 LY96Q9Y6Y9 160 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 NUP210LQ5VU65 1888 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 hDV102S1A0JD36 115 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 A8MXK9 166 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 ATP5G3P48201 142 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 PSG9Q00887 426 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 CGAP01215 116 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 NEU4Q8WWR8 484 aaPredicted RBP2.72□□□□□ -1.97
SYNE2-212ENST00000554584 PQLC2LA1A4F0 135 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 FXYD1O00168 92 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 FOXS1O43638 330 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 EFNA2O43921 213 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 XCL1P47992 114 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 VWC2Q2TAL6 325 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 PLPPR1Q8TBJ4 325 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 TMEM242Q9NWH2 141 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 SS18Q15532 418 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 HIGD2BQ4VC39 106 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 SPSB3Q6PJ21 355 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 ZNF664Q8N3J9 261 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 CLDND2Q8NHS1 167 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 ST6GALNAC2Q9UJ37 374 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 ZNF660Q6AZW8 331 aaPredicted RBP2.72□□□□□ -1.97
SYNE2-212ENST00000554584 CYP2G1PQ6ZSU1 146 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 EPDR1Q9UM22 224 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 C5orf38Q86SI9 138 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 PCP2Q8IVA1 136 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 TRAV3A0A0B4J244 114 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 LIME1Q9H400 295 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 IGKV4-1P06312 121 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 RBM3P98179 157 aaKnown RBP2.72□□□□□ -1.97
SYNE2-212ENST00000554584 TBX6O95947 436 aaPredicted RBP2.72□□□□□ -1.97
SYNE2-212ENST00000554584 MST1P26927 711 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 SAMD5Q5TGI4 173 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 OR52E5Q8NH55 327 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 BUB3O43684 328 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 LMO1P25800 156 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 AMTNQ6UX39 209 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 Q6ZNB5 142 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 A0A1W2PQF6 199 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 ATP5L2Q7Z4Y8 100 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 FER1L6-AS1Q8NA97 138 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 MARCH11A6NNE9 402 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 APRG1Q8IVJ8 170 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 ZNF721Q8TF20 911 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 MPC1Q9Y5U8 109 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 TRAV26-2A0A0B4J265 109 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 A0A0U1RQV1 116 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 AZU1P20160 251 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 SLURP1P55000 103 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 NRIP2Q9BQI9 281 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 Q9H3A6 140 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 ZNF581Q9P0T4 197 aa2.72□□□□□ -1.97
SYNE2-212ENST00000554584 POU2AF1Q16633 256 aa2.71□□□□□ -1.97
SYNE2-212ENST00000554584 PILRBQ9UKJ0 227 aa2.71□□□□□ -1.97
SYNE2-212ENST00000554584 SIGLEC15Q6ZMC9 328 aa2.71□□□□□ -1.97
SYNE2-212ENST00000554584 NEUROG3Q9Y4Z2 214 aa2.71□□□□□ -1.97
SYNE2-212ENST00000554584 NANOS3P60323 173 aaKnown RBP2.71□□□□□ -1.98
SYNE2-212ENST00000554584 ATXN8Q156A1 80 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 IGKV1-16P04430 117 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 P2RY6Q15077 328 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 MRPL23Q16540 153 aaKnown RBP2.71□□□□□ -1.98
SYNE2-212ENST00000554584 PRIMA1Q86XR5 153 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 CSTL1Q9H114 145 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 RPS20P60866 119 aaKnown RBP2.71□□□□□ -1.98
SYNE2-212ENST00000554584 TMEM45BQ96B21 275 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 MSRB3Q8IXL7 192 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 PAQR4Q8N4S7 273 aaPredicted RBP2.71□□□□□ -1.98
SYNE2-212ENST00000554584 NHSQ6T4R5 1651 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 WISP2O76076 250 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 HSPE1P61604 102 aaKnown RBP2.71□□□□□ -1.98
SYNE2-212ENST00000554584 FAM90A18PA6NE21 464 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 FAM90A16PA6NEW6 464 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 FAM90A9PA6NNJ1 464 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 FAM90A5PA8MXJ8 464 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 PRSS23O95084 383 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 FAM90A15PP0C7V4 464 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 FAM90A14PP0C7W9 464 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 APOBEC3AP31941 199 aaPredicted RBP2.71□□□□□ -1.98
SYNE2-212ENST00000554584 CIARTQ8N365 385 aaPredicted RBP2.71□□□□□ -1.98
SYNE2-212ENST00000554584 CACNG8Q8WXS5 425 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 NRXN2Q9P2S2 1712 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 IGKV1D-13A0A0B4J2D9 117 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 C7orf66A4D0T2 115 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 CXCL10P02778 98 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 IGKV1-13P0DP09 117 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 GATA3P23771 443 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 CD300LDQ6UXZ3 194 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 LILRA6Q6PI73 481 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 IGLV3-10A0A075B6K4 115 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 TRAV14DV4A0A0A6YYC5 116 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 HLA-DMBP28068 263 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 NHLRC3Q5JS37 347 aa2.71□□□□□ -1.98
SYNE2-212ENST00000554584 CASC2Q6XLA1 102 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms