RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 DLX1P56177 255 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 HILS1P60008 231 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 PPP1CBP62140 327 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 UBE2G1P62253 170 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 PLGLB1Q02325 96 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 ELOCQ15369 112 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 SPRNQ5BIV9 151 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 PSMG4Q5JS54 123 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 KLF17Q5JT82 389 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-227ENST00000554491 OR4C11Q6IEV9 310 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 GAGE2AQ6NT46 116 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 TMEM136Q6ZRR5 245 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 CLECL1Q8IZS7 167 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 RAB42Q8N4Z0 105 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 WDR31Q8NA23 367 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 FAM213BQ8TBF2 198 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 KLK6Q92876 244 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 DPH3Q96FX2 82 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 BMFQ96LC9 184 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 SCGB3A2Q96PL1 93 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 SMIM14Q96QK8 99 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 FAM173AQ9BQD7 235 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 PILRAQ9UKJ1 303 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 FZR1Q9UM11 496 aa3.5□□□□□ -1.85
ATXN3-227ENST00000554491 MDC1Q14676 2089 aaKnown RBP3.5□□□□□ -1.85
ATXN3-227ENST00000554491 C3orf85A0A1B0GTC6 90 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 A0A1B0GWB2 263 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 LOC107986453A0A1B0GWG9 222 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 LILRA5A6NI73 299 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 NPIPB11E5RHQ5 1161 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 TMEM178BH3BS89 294 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 M0R129 80 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 SDCBPO00560 298 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-227ENST00000554491 TNFSF12O43508 249 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 LDB3O75112 727 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 CLDN14O95500 239 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 CD55P08174 381 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 CRYGAP11844 174 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 GATA1P15976 413 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-227ENST00000554491 PSMB8P28062 276 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 TAS2R45P59539 299 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 PPP1CAP62136 330 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 RPL23P62829 140 aaKnown RBP3.49□□□□□ -1.85
ATXN3-227ENST00000554491 CCL20P78556 96 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 Q0VFX4 171 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 PMAIP1Q13794 54 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF718Q3SXZ3 478 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 Q499Y3 187 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 TMEM52BQ4KMG9 183 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 TMEM14EPQ6UXP3 125 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 SLC25A48Q6ZT89 311 aaKnown RBP3.49□□□□□ -1.85
ATXN3-227ENST00000554491 SH2D6Q7Z4S9 175 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 HSD11B1LQ7Z5J1 315 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 EXOC3-AS1Q8N2X6 119 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 RFLNBQ8N5W9 214 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 LRTM2Q8N967 370 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF114Q8NC26 417 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 MRPL53Q96EL3 112 aaKnown RBP3.49□□□□□ -1.85
ATXN3-227ENST00000554491 PDCD1LG2Q9BQ51 273 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 FAM103A1Q9BTL3 118 aaKnown RBP3.49□□□□□ -1.85
ATXN3-227ENST00000554491 GNB1LQ9BYB4 327 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 IMUPQ9GZP8 106 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 LAMTOR3Q9UHA4 124 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF835Q9Y2P0 537 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 KLF12Q9Y4X4 402 aa3.49□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF732B4DXR9 585 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 LY6LH3BQJ8 138 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 J3QQQ9 107 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 OXTP01178 125 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 BCL2P10415 239 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF708P17019 499 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 PFN2P35080 140 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 FOXA3P55318 350 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-227ENST00000554491 OR1C1Q15619 314 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 Q56UQ5 140 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 LYRM7Q5U5X0 104 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 FAM219BQ5XKK7 198 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 DMKNQ6E0U4 476 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-227ENST00000554491 ACP7Q6ZNF0 438 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 C2orf91Q6ZV80 131 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 NUP35Q8NFH5 326 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 OR10G8Q8NGN5 311 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF563Q8TA94 476 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 PIFOQ8TCI5 191 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 ITLN2Q8WWU7 325 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-227ENST00000554491 RND1Q92730 232 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 ZNF501Q96CX3 271 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-227ENST00000554491 LINC00479Q96M42 142 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 TMEM59Q9BXS4 323 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 CXXC4Q9H2H0 198 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 TAAR2Q9P1P5 351 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 KLF13Q9Y2Y9 288 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-227ENST00000554491 OR2W1Q9Y3N9 320 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 PYGO1Q9Y3Y4 419 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 KCNE3Q9Y6H6 103 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 MXRA5Q9NR99 2828 aa3.48□□□□□ -1.85
ATXN3-227ENST00000554491 AKAP6Q13023 2319 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 ANK2Q01484 3957 aa3.47□□□□□ -1.85
ATXN3-227ENST00000554491 IGHV5-10-1A0A0J9YXX1 117 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms