RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 OR10J3Q5JRS4 329 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 ZNF843Q8N446 348 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 SLC25A2Q9BXI2 301 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 GNB1LQ9BYB4 327 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 V9GYV3 84 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 DOPEY2Q9Y3R5 2298 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 TMEM238LA0A1B0GVL6 79 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 PSMB11A5LHX3 300 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 BMPR1BO00238 502 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 GOSR1O95249 250 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 RPS20P60866 119 aaKnown RBP9.23□□□□□ -0.93
SHMT2-212ENST00000554467 CX3CL1P78423 397 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 C10orf113Q5VZT2 155 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 TECRQ9NZ01 308 aaKnown RBP9.23□□□□□ -0.93
SHMT2-212ENST00000554467 SELENOKQ9Y6D0 94 aa9.23□□□□□ -0.93
SHMT2-212ENST00000554467 NTF3P20783 257 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 SRIP30626 198 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 UBE2L3P68036 154 aaKnown RBP9.22□□□□□ -0.93
SHMT2-212ENST00000554467 RPEL1Q2QD12 228 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 TIGITQ495A1 244 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 LINC00305Q7Z4B0 112 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 CREBBPQ92793 2442 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 TRAV9-2A0A087WT02 112 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 TRAV8-6A0A0B4J262 113 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 FOXE3Q13461 319 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 AJUBAQ96IF1 538 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 FAM167A-AS1Q96KT0 104 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 HELZ2Q9BYK8 2649 aaKnown RBP9.22□□□□□ -0.93
SHMT2-212ENST00000554467 GGTLC3B5MD39 225 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 CORTO00230 105 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 C8orf88P0DMB2 117 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 SRSF1Q07955 248 aaKnown RBP eCLIP9.22□□□□□ -0.93
SHMT2-212ENST00000554467 TMEM249Q2WGJ8 235 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 C1orf122Q6ZSJ8 110 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 TMEM219Q86XT9 240 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 BLNKQ8WV28 456 aa9.22□□□□□ -0.93
SHMT2-212ENST00000554467 MUC21A0A0G2JKD1 596 aa9.21□□□□□ -0.93
SHMT2-212ENST00000554467 MUC21A0A140T8X8 626 aa9.21□□□□□ -0.93
SHMT2-212ENST00000554467 MUC21Q5SSG8 566 aa9.21□□□□□ -0.93
SHMT2-212ENST00000554467 BVES-AS1Q5T3Y7 98 aa9.21□□□□□ -0.93
SHMT2-212ENST00000554467 MAPK1IP1LQ8NDC0 245 aa9.21□□□□□ -0.93
SHMT2-212ENST00000554467 CRYGCP07315 174 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 LYZP61626 148 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 PSG9Q00887 426 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 Q56UQ5 140 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 THAP8Q8NA92 274 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 WFDC12Q8WWY7 111 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 PIMREGQ9BSJ6 248 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 TRAV9-1A0A075B6T8 112 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 CENPVL3A0A0U1RRI6 287 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 I3L2K1 104 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 NDUFA3O95167 84 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 CCDC144NLQ6NUI1 221 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 DEFB125Q8N687 156 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 NPBQ8NG41 125 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 ARPC1AQ92747 370 aa9.21□□□□□ -0.94
SHMT2-212ENST00000554467 UBE2E1P51965 193 aa9.2□□□□□ -0.94
SHMT2-212ENST00000554467 RNF5Q99942 180 aa9.2□□□□□ -0.94
SHMT2-212ENST00000554467 TRAV40A0A0B4J280 105 aa9.2□□□□□ -0.94
SHMT2-212ENST00000554467 C2orf70A6NJV1 201 aa9.2□□□□□ -0.94
SHMT2-212ENST00000554467 LINC01548A6NM66 108 aa9.2□□□□□ -0.94
SHMT2-212ENST00000554467 K7EIM0 57 aa9.2□□□□□ -0.94
SHMT2-212ENST00000554467 NUDT3O95989 172 aa9.2□□□□□ -0.94
SHMT2-212ENST00000554467 TAS2R45P59539 299 aa9.2□□□□□ -0.94
SHMT2-212ENST00000554467 TMEM116Q8NCL8 245 aa9.2□□□□□ -0.94
SHMT2-212ENST00000554467 ZNF469Q96JG9 3925 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-212ENST00000554467 IGHV3-35A0A0C4DH35 117 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 BCL6BQ8N143 479 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-212ENST00000554467 C10orf105Q8TEF2 133 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 SMIM12Q96EX1 92 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 PAXXQ9BUH6 204 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 IGHV3OR16-8A0A075B7F1 116 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 FAM181BA6NEQ2 426 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 NPFFO15130 113 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 SLAQ13239 276 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 S100A7AQ86SG5 101 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 BORCS7Q96B45 105 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 IGLC1P0CG04 106 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 ECSCRQ19T08 205 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 IBA57Q5T440 356 aaKnown RBP9.19□□□□□ -0.94
SHMT2-212ENST00000554467 MINOS1Q5TGZ0 78 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 C18orf32Q8TCD1 76 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 TMEM167BQ9NRX6 74 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 TIMM8BQ9Y5J9 83 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-212ENST00000554467 MINOS1-NBL1R4GNA1 71 aa9.19□□□□□ -0.94
SHMT2-212ENST00000554467 SONP18583 2426 aaKnown RBP9.19□□□□□ -0.94
SHMT2-212ENST00000554467 TRBV9A0A0B4J1U6 114 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 K7ERU9 68 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 IGHV4-38-2P0DP08 117 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 CAMPP49913 170 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 GNG5P63218 68 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 PMCHL1Q16048 86 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 Q8N6K4 173 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 TXNDC17Q9BRA2 123 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 LINC00527Q9UJ94 153 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 OR2J3O76001 311 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 IGKV1-17P01599 117 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 PVRIGQ6DKI7 326 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 Q8N9W7 124 aa9.18□□□□□ -0.94
SHMT2-212ENST00000554467 OR1L4Q8NGR5 311 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms