RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 KCNE5Q9UJ90 142 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 IER3IP1Q9Y5U9 82 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 PXMP4Q9Y6I8 212 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 KIAA2026Q5HYC2 2103 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 CMYA5Q8N3K9 4069 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 IGLV3-9A0A075B6K5 115 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 TRGV10A0A0A0MS01 117 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 TRAV8-4A0A0B4J246 113 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 A0A1B0GXF2 115 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 OR2T8A6NH00 312 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 MRPL33O75394 65 aaKnown RBP2.12□□□□□ -2.07
PRPF39-206ENST00000554429 OR2A4O95047 310 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 MT-ATP8P03928 68 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 SCTP09683 121 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 ADCYAP1P18509 176 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 OR10J1P30954 320 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 LPAR6P43657 344 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 NANOS3P60323 173 aaKnown RBP2.12□□□□□ -2.07
PRPF39-206ENST00000554429 LMO4P61968 165 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF85Q03923 595 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 HGFACQ04756 655 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 ATP5G2Q06055 141 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 ARFRP1Q13795 201 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 HES1Q14469 280 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 C12orf74Q32Q52 190 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 MRPL2Q5T653 305 aaKnown RBP2.12□□□□□ -2.07
PRPF39-206ENST00000554429 C12orf73Q69YU5 71 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 Q6ZN92 141 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 ACP7Q6ZNF0 438 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 TTC9CQ8N5M4 171 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 DEFB125Q8N687 156 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 POP5Q969H6 163 aaKnown RBP2.12□□□□□ -2.07
PRPF39-206ENST00000554429 TMEM106AQ96A25 262 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 NEURL3Q96EH8 262 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 BORCS8Q96FH0 119 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 IGF2BP2-AS1Q96M15 143 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 OR2A7Q96R45 310 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 PLEKHA3Q9HB20 300 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 C19orf73Q9NVV2 129 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 SPANXCQ9NY87 97 aa2.12□□□□□ -2.07
PRPF39-206ENST00000554429 NOP16Q9Y3C1 178 aaKnown RBP2.12□□□□□ -2.07
PRPF39-206ENST00000554429 TMEM272A0A1B0GTI8 110 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 hDV102S1A0JD36 115 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 TMEM235A6NFC5 223 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 GGT3PA6NGU5 568 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF705FA8MVS1 300 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 GGTLC3B5MD39 225 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 MCRIP1C9JLW8 97 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 XKRYO14609 159 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 PIN1P1O15428 100 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 GSTZ1O43708 216 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 CREBL2O60519 120 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 CA2P00918 260 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 HRASP01112 189 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 KRASP01116 189 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 MSMBP08118 114 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 CD55P08174 381 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF705DP0CH99 300 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF705BP0CI00 300 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 HIST1H1DP16402 221 aaKnown RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 SRP14P37108 136 aaKnown RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 RPS10P46783 165 aaKnown RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 RPS23P62266 143 aaKnown RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 SNRPGP62308 76 aaKnown RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 HERVK_113P63121 156 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 MSMO1Q15800 293 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 NSUN5P1Q3KNT7 163 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 TMEM30BQ3MIR4 351 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 CENPWQ5EE01 88 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 KPRPQ5T749 579 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 TMEM14EPQ6UXP3 125 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 FOXI2Q6ZQN5 318 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 LINC00596Q86U02 117 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF114Q8NC26 417 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 OR4C16Q8NGL9 310 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 METTL26Q96S19 204 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 SAMD10Q9BYL1 202 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 BPESC1Q9GZL8 116 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 WDR61Q9GZS3 305 aaKnown RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 IFI27L2Q9H2X8 130 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 OTORQ9NRC9 128 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 TAS2R8Q9NYW2 309 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 PYGO1Q9Y3Y4 419 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 ATRQ13535 2644 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 SONP18583 2426 aaKnown RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 A0A087WZ39 114 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 IGHV1-69-2A0A0G2JMI3 117 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 TRDV1A0A1B0GX56 115 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 DPM2O94777 84 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 HLA-DRB1P01911 266 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 HLA-DQB1P01920 261 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 RNASE1P07998 156 aaKnown RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 CECR9P0C854 216 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 EGR2P11161 476 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 SEC61A1P61619 476 aaKnown RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 HLA-DRB3P79483 266 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 TTC32Q5I0X7 151 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF660Q6AZW8 331 aaPredicted RBP2.11□□□□□ -2.07
PRPF39-206ENST00000554429 PVRIGQ6DKI7 326 aa2.11□□□□□ -2.07
PRPF39-206ENST00000554429 OR2T2Q6IF00 324 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms