RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 GBGT1Q8N5D6 347 aa9.68□□□□□ -0.86
SHMT2-211ENST00000554310 MS4A6AQ9H2W1 248 aa9.68□□□□□ -0.86
SHMT2-211ENST00000554310 KCNIP2Q9NS61 270 aa9.68□□□□□ -0.86
SHMT2-211ENST00000554310 U3KQE9 123 aa9.68□□□□□ -0.86
SHMT2-211ENST00000554310 CTXND1A0A1B0GTU2 59 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 LOC102723971A0A1B0GUV8 181 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 A0A1B0GV50 99 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 MAP1LC3B2A6NCE7 125 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 UBE2CO00762 179 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 NDUFS6O75380 124 aaKnown RBP9.67□□□□□ -0.86
SHMT2-211ENST00000554310 PSG1P11464 419 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 GAMTQ14353 236 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 ICAM4Q14773 271 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 USF2Q15853 346 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-211ENST00000554310 ACOT6Q3I5F7 207 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-211ENST00000554310 FFAR4Q5NUL3 377 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 Q6ZWC4 215 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 CLRN3Q8NCR9 226 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 OR51G1Q8NGK1 321 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 OR10G4Q8NGN3 311 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 ACTR3CQ9C0K3 210 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-211ENST00000554310 MAP1LC3BQ9GZQ8 125 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 NPVFQ9HCQ7 196 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 TP53TG1Q9Y2A0 90 aa9.67□□□□□ -0.86
SHMT2-211ENST00000554310 IFNA1P01562 189 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 SRP19P09132 144 aaKnown RBP9.66□□□□□ -0.86
SHMT2-211ENST00000554310 CASC10Q5T4H9 136 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 LCN15Q6UWW0 184 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 SSX7Q7RTT5 188 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 APRG1Q8IVJ8 170 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 RPP25LQ8N5L8 163 aaKnown RBP9.66□□□□□ -0.86
SHMT2-211ENST00000554310 STPG3Q8N7X2 389 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 STXBP6Q8NFX7 210 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 OR10G9Q8NGN4 311 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 OR10G7Q8NGN6 311 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 GLMPQ8WWB7 406 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 RNF125Q96EQ8 232 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 RARRES2Q99969 163 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 OVOL2Q9BRP0 275 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 SLC39A9Q9NUM3 307 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 RABAC1Q9UI14 185 aa9.66□□□□□ -0.86
SHMT2-211ENST00000554310 TMA7Q9Y2S6 64 aaKnown RBP9.66□□□□□ -0.86
SHMT2-211ENST00000554310 IGKV1D-37A0A075B6S9 117 aa9.65□□□□□ -0.86
SHMT2-211ENST00000554310 FAM74A7A6NL05 159 aa9.65□□□□□ -0.86
SHMT2-211ENST00000554310 K7EQG2 157 aa9.65□□□□□ -0.86
SHMT2-211ENST00000554310 BCL2P10415 239 aa9.65□□□□□ -0.86
SHMT2-211ENST00000554310 TAGLN2P37802 199 aaKnown RBP9.65□□□□□ -0.86
SHMT2-211ENST00000554310 FAM74A3Q4VXF1 159 aa9.65□□□□□ -0.86
SHMT2-211ENST00000554310 C16orf54Q6UWD8 224 aa9.65□□□□□ -0.86
SHMT2-211ENST00000554310 WFDC3Q8IUB2 231 aa9.65□□□□□ -0.86
SHMT2-211ENST00000554310 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-211ENST00000554310 THAP8Q8NA92 274 aa9.65□□□□□ -0.86
SHMT2-211ENST00000554310 TRGV9Q99603 122 aa9.65□□□□□ -0.86
SHMT2-211ENST00000554310 SMCO3A2RU48 225 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 BUB3O43684 328 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 RPL35AP18077 110 aaKnown RBP9.64□□□□□ -0.87
SHMT2-211ENST00000554310 ZNF90Q03938 601 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 ZNF124Q15973 351 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 DEFB135Q30KP9 77 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 SOHLH1Q5JUK2 328 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 TEPPQ6URK8 271 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 IL17DQ8TAD2 202 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 RXFP4Q8TDU9 374 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 DCANP1Q8TF63 244 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 MGST2Q99735 147 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 GNG13Q9P2W3 67 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 CSMD3Q7Z407 3707 aa9.64□□□□□ -0.87
SHMT2-211ENST00000554310 TENM2Q9NT68 2774 aa9.63□□□□□ -0.87
SHMT2-211ENST00000554310 IGKV1OR2-108A0A075B7D4 117 aa9.63□□□□□ -0.87
SHMT2-211ENST00000554310 SPRY2O43597 315 aa9.63□□□□□ -0.87
SHMT2-211ENST00000554310 CDC34P49427 236 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-211ENST00000554310 DEFB131AP59861 70 aa9.63□□□□□ -0.87
SHMT2-211ENST00000554310 RAB31Q13636 194 aa9.63□□□□□ -0.87
SHMT2-211ENST00000554310 FAM122CQ6P4D5 195 aa9.63□□□□□ -0.87
SHMT2-211ENST00000554310 SIGLEC15Q6ZMC9 328 aa9.63□□□□□ -0.87
SHMT2-211ENST00000554310 FAM24BQ8N5W8 94 aa9.63□□□□□ -0.87
SHMT2-211ENST00000554310 RAB24Q969Q5 203 aa9.63□□□□□ -0.87
SHMT2-211ENST00000554310 MANBALQ9NQG1 85 aa9.63□□□□□ -0.87
SHMT2-211ENST00000554310 VAX2Q9UIW0 290 aa9.63□□□□□ -0.87
SHMT2-211ENST00000554310 PXMP4Q9Y6I8 212 aa9.63□□□□□ -0.87
SHMT2-211ENST00000554310 ZNF688P0C7X2 276 aa9.62□□□□□ -0.87
SHMT2-211ENST00000554310 RPL29P47914 159 aaKnown RBP9.62□□□□□ -0.87
SHMT2-211ENST00000554310 FGF8P55075 233 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-211ENST00000554310 LYZP61626 148 aa9.62□□□□□ -0.87
SHMT2-211ENST00000554310 RHEBQ15382 184 aa9.62□□□□□ -0.87
SHMT2-211ENST00000554310 LEMD1Q68G75 181 aa9.62□□□□□ -0.87
SHMT2-211ENST00000554310 TMEM144Q7Z5S9 345 aa9.62□□□□□ -0.87
SHMT2-211ENST00000554310 RNF183Q96D59 192 aa9.62□□□□□ -0.87
SHMT2-211ENST00000554310 CSTL1Q9H114 145 aa9.62□□□□□ -0.87
SHMT2-211ENST00000554310 SLC25A22Q9H936 323 aa9.62□□□□□ -0.87
SHMT2-211ENST00000554310 SEPSECSQ9HD40 501 aaKnown RBP9.62□□□□□ -0.87
SHMT2-211ENST00000554310 NRN1Q9NPD7 142 aa9.62□□□□□ -0.87
SHMT2-211ENST00000554310 PSMB3P49720 205 aa9.61□□□□□ -0.87
SHMT2-211ENST00000554310 C1orf194Q5T5A4 169 aa9.61□□□□□ -0.87
SHMT2-211ENST00000554310 ZFAND6Q6FIF0 208 aa9.61□□□□□ -0.87
SHMT2-211ENST00000554310 GATAD1Q8WUU5 269 aa9.61□□□□□ -0.87
SHMT2-211ENST00000554310 SLC45A2Q9UMX9 530 aa9.61□□□□□ -0.87
SHMT2-211ENST00000554310 STARD9Q9P2P6 4700 aa9.6□□□□□ -0.87
SHMT2-211ENST00000554310 A0A1W2PPV4 95 aa9.6□□□□□ -0.87
SHMT2-211ENST00000554310 C7orf77A4D0Y5 90 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms