RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 OR10J4P0C629 311 aa8.29□□□□□ -1.08
PABPN1-203ENST00000553960 ATP5G3P48201 142 aa8.29□□□□□ -1.08
PABPN1-203ENST00000553960 DEFA5Q01523 94 aa8.29□□□□□ -1.08
PABPN1-203ENST00000553960 TMEM183BQ1AE95 376 aa8.29□□□□□ -1.08
PABPN1-203ENST00000553960 TMEM241Q24JQ0 296 aa8.29□□□□□ -1.08
PABPN1-203ENST00000553960 RPEL1Q2QD12 228 aa8.29□□□□□ -1.08
PABPN1-203ENST00000553960 CST9LP1Q5W188 147 aa8.29□□□□□ -1.08
PABPN1-203ENST00000553960 TVP23CQ96ET8 276 aa8.29□□□□□ -1.08
PABPN1-203ENST00000553960 PARLQ9H300 379 aa8.29□□□□□ -1.08
PABPN1-203ENST00000553960 MLXQ9UH92 298 aa8.29□□□□□ -1.08
PABPN1-203ENST00000553960 SETD2Q9BYW2 2564 aaPredicted RBP8.29□□□□□ -1.08
PABPN1-203ENST00000553960 TRBV7-9A0A0J9YWB2 115 aa8.28□□□□□ -1.08
PABPN1-203ENST00000553960 A0A1B0GV50 99 aa8.28□□□□□ -1.08
PABPN1-203ENST00000553960 CXorf65A6NEN9 183 aa8.28□□□□□ -1.08
PABPN1-203ENST00000553960 CHEK1O14757 476 aa8.28□□□□□ -1.08
PABPN1-203ENST00000553960 TSPAN4O14817 238 aa8.28□□□□□ -1.08
PABPN1-203ENST00000553960 IGHV3-11P01762 117 aa8.28□□□□□ -1.08
PABPN1-203ENST00000553960 APOC3P02656 99 aa8.28□□□□□ -1.08
PABPN1-203ENST00000553960 HOXD3P31249 432 aaPredicted RBP8.28□□□□□ -1.08
PABPN1-203ENST00000553960 NDUFA11Q86Y39 141 aa8.28□□□□□ -1.08
PABPN1-203ENST00000553960 CLRN3Q8NCR9 226 aa8.28□□□□□ -1.08
PABPN1-203ENST00000553960 SMIM7Q9BQ49 75 aa8.28□□□□□ -1.08
PABPN1-203ENST00000553960 Q9H3A6 140 aa8.28□□□□□ -1.08
PABPN1-203ENST00000553960 IGHV4OR15-8A0A075B7B6 117 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 A0A087WW49 117 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 ADARB2-AS1A8MUL3 147 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 ZNF727A8MUV8 499 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 ISLRO14498 428 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 SOCS3O14543 225 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 TCRAP04437 139 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 LEMD1Q68G75 181 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 LCNL1Q6ZST4 164 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 TMEM75Q8N9X5 138 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 FMC1Q96HJ9 113 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 MLST8Q9BVC4 326 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 CTDSP1Q9GZU7 261 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 AAMDCQ9H7C9 122 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 PEMTQ9UBM1 199 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 LENEPQ9Y5L5 61 aa8.27□□□□□ -1.09
PABPN1-203ENST00000553960 NIPBLQ6KC79 2804 aaeCLIP8.27□□□□□ -1.09
PABPN1-203ENST00000553960 TRBV20OR9-2A0A075B6H5 130 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 TRAV25A0A0B4J276 109 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 PGPA6NDG6 321 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 PEX7O00628 323 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 EIF3GO75821 320 aaKnown RBP eCLIP8.26□□□□□ -1.09
PABPN1-203ENST00000553960 ATF4P18848 351 aaPredicted RBP8.26□□□□□ -1.09
PABPN1-203ENST00000553960 CNN1P51911 297 aaKnown RBP8.26□□□□□ -1.09
PABPN1-203ENST00000553960 UBE2G2P60604 165 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 RANP62826 216 aaKnown RBP8.26□□□□□ -1.09
PABPN1-203ENST00000553960 GUCA2BQ16661 112 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 LINC01551Q86U37 167 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 IQCF2Q8IXL9 164 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 OR1N2Q8NGR9 330 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 IGF2BP2-AS1Q96M15 143 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 RHPN1-AS1Q9BWJ2 59 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 NRN1Q9NPD7 142 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 BIN3Q9NQY0 253 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 ZFP30Q9Y2G7 519 aa8.26□□□□□ -1.09
PABPN1-203ENST00000553960 JMJD1CQ15652 2540 aa8.25□□□□□ -1.09
PABPN1-203ENST00000553960 SCO2A0A1W2PP80 73 aa8.25□□□□□ -1.09
PABPN1-203ENST00000553960 C2orf70A6NJV1 201 aa8.25□□□□□ -1.09
PABPN1-203ENST00000553960 K7EQM0 130 aa8.25□□□□□ -1.09
PABPN1-203ENST00000553960 LTAP01374 205 aa8.25□□□□□ -1.09
PABPN1-203ENST00000553960 IGLV2-11P01706 119 aa8.25□□□□□ -1.09
PABPN1-203ENST00000553960 CBLN1P23435 193 aa8.25□□□□□ -1.09
PABPN1-203ENST00000553960 RPL35P42766 123 aaKnown RBP8.25□□□□□ -1.09
PABPN1-203ENST00000553960 FAM231DQ6ZW35 169 aa8.25□□□□□ -1.09
PABPN1-203ENST00000553960 OR11H1Q8NG94 326 aa8.25□□□□□ -1.09
PABPN1-203ENST00000553960 OR9G4Q8NGQ1 327 aa8.25□□□□□ -1.09
PABPN1-203ENST00000553960 IMMP2LQ96T52 175 aa8.25□□□□□ -1.09
PABPN1-203ENST00000553960 C7orf77A4D0Y5 90 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 DIRC3C9JPN6 131 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 CCL24O00175 119 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 PPP1R2P9O14990 202 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 GCGP01275 180 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 APOHP02749 345 aaPredicted RBP8.24□□□□□ -1.09
PABPN1-203ENST00000553960 CSN1S1P47710 185 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 RPL23P62829 140 aaKnown RBP8.24□□□□□ -1.09
PABPN1-203ENST00000553960 TM4SF20Q53R12 229 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 C9orf47Q6ZRZ4 202 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 C8orf86Q6ZUL3 223 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 KLHL30-AS1Q8NEE0 82 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 OR2K2Q8NGT1 345 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 CMTM2Q8TAZ6 248 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 DCANP1Q8TF63 244 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 DPF1Q92782 380 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 ANAPC16Q96DE5 110 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 RAX2Q96IS3 184 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 FAM110AQ9BQ89 295 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 C20orf24Q9BUV8 137 aa8.24□□□□□ -1.09
PABPN1-203ENST00000553960 TRAV8-2A0A0B4J237 113 aa8.23□□□□□ -1.09
PABPN1-203ENST00000553960 IGHV3-35A0A0C4DH35 117 aa8.23□□□□□ -1.09
PABPN1-203ENST00000553960 SLC17A3O00476 420 aa8.23□□□□□ -1.09
PABPN1-203ENST00000553960 IGLV2-8P01709 118 aa8.23□□□□□ -1.09
PABPN1-203ENST00000553960 CD28P10747 220 aa8.23□□□□□ -1.09
PABPN1-203ENST00000553960 PSG3Q16557 428 aa8.23□□□□□ -1.09
PABPN1-203ENST00000553960 TMEM183AQ8IXX5 376 aa8.23□□□□□ -1.09
PABPN1-203ENST00000553960 BLNKQ8WV28 456 aa8.23□□□□□ -1.09
PABPN1-203ENST00000553960 ISOC2Q96AB3 205 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms