RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 TRBV19A0A075B6N1 114 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 TRAV8-2A0A0B4J237 113 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 SLC17A3O00476 420 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 HMGB3O15347 200 aaKnown RBP13.44□□□□□ -0.26
PSEN1-208ENST00000553719 OR7C2O60412 319 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 ZNF253O75346 499 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 CD7P09564 240 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 ARL14EPLP0DKL9 152 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 TFPI2P48307 235 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 FAM74A1Q5RGS3 127 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 LCN15Q6UWW0 184 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 Q8N1Y9 231 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 MBD3L1Q8WWY6 194 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 PRR25Q96S07 402 aa13.44□□□□□ -0.26
PSEN1-208ENST00000553719 DNASE2O00115 360 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-208ENST00000553719 ISLRO14498 428 aa13.43□□□□□ -0.26
PSEN1-208ENST00000553719 NDUFB4O95168 129 aa13.43□□□□□ -0.26
PSEN1-208ENST00000553719 SNRPCP09234 159 aaKnown RBP13.43□□□□□ -0.26
PSEN1-208ENST00000553719 OR10J4P0C629 311 aa13.43□□□□□ -0.26
PSEN1-208ENST00000553719 PDE6HQ13956 83 aa13.43□□□□□ -0.26
PSEN1-208ENST00000553719 GUK1Q16774 197 aa13.43□□□□□ -0.26
PSEN1-208ENST00000553719 SAMD13Q5VXD3 122 aa13.43□□□□□ -0.26
PSEN1-208ENST00000553719 ALKAL2Q6UX46 152 aa13.43□□□□□ -0.26
PSEN1-208ENST00000553719 WFDC3Q8IUB2 231 aa13.43□□□□□ -0.26
PSEN1-208ENST00000553719 FAM213BQ8TBF2 198 aa13.43□□□□□ -0.26
PSEN1-208ENST00000553719 RNF141Q8WVD5 230 aa13.43□□□□□ -0.26
PSEN1-208ENST00000553719 MAP6D1Q9H9H5 199 aa13.43□□□□□ -0.26
PSEN1-208ENST00000553719 ZNF331Q9NQX6 463 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-208ENST00000553719 MAP1LC3B2A6NCE7 125 aa13.42□□□□□ -0.26
PSEN1-208ENST00000553719 H3BTX0 84 aa13.42□□□□□ -0.26
PSEN1-208ENST00000553719 PSMB3P49720 205 aa13.42□□□□□ -0.26
PSEN1-208ENST00000553719 UBE2L3P68036 154 aaKnown RBP13.42□□□□□ -0.26
PSEN1-208ENST00000553719 MAP1LC3BQ9GZQ8 125 aa13.42□□□□□ -0.26
PSEN1-208ENST00000553719 CXorf1O96002 111 aa13.41□□□□□ -0.26
PSEN1-208ENST00000553719 NBEAP1P0C6P0 100 aa13.41□□□□□ -0.26
PSEN1-208ENST00000553719 GCHFRP30047 84 aa13.41□□□□□ -0.26
PSEN1-208ENST00000553719 CD81P60033 236 aa13.41□□□□□ -0.26
PSEN1-208ENST00000553719 TEX261Q6UWH6 196 aa13.41□□□□□ -0.26
PSEN1-208ENST00000553719 SLC50A1Q9BRV3 221 aa13.41□□□□□ -0.26
PSEN1-208ENST00000553719 AURKAIP1Q9NWT8 199 aaPredicted RBP13.41□□□□□ -0.26
PSEN1-208ENST00000553719 ZNF688P0C7X2 276 aa13.4□□□□□ -0.26
PSEN1-208ENST00000553719 GTSCR1Q86UQ5 136 aa13.4□□□□□ -0.26
PSEN1-208ENST00000553719 C16orf92Q96LL3 132 aa13.4□□□□□ -0.26
PSEN1-208ENST00000553719 C20orf173Q96LM9 149 aa13.4□□□□□ -0.26
PSEN1-208ENST00000553719 PRKDCP78527 4128 aaKnown RBP13.4□□□□□ -0.26
PSEN1-208ENST00000553719 TRAV1-1A0A0B4J248 108 aa13.39□□□□□ -0.27
PSEN1-208ENST00000553719 FGF8P55075 233 aaPredicted RBP13.39□□□□□ -0.27
PSEN1-208ENST00000553719 IGFL4Q6B9Z1 124 aa13.39□□□□□ -0.27
PSEN1-208ENST00000553719 WFDC10AQ9H1F0 79 aa13.39□□□□□ -0.27
PSEN1-208ENST00000553719 UBQLN2Q9UHD9 624 aa13.39□□□□□ -0.27
PSEN1-208ENST00000553719 OR11H12B2RN74 326 aa13.38□□□□□ -0.27
PSEN1-208ENST00000553719 H2AFB1P0C5Y9 115 aa13.38□□□□□ -0.27
PSEN1-208ENST00000553719 HLA-DMBP28068 263 aa13.38□□□□□ -0.27
PSEN1-208ENST00000553719 ID1P41134 155 aa13.38□□□□□ -0.27
PSEN1-208ENST00000553719 SNRPD3P62318 126 aaKnown RBP13.38□□□□□ -0.27
PSEN1-208ENST00000553719 RNF182Q8N6D2 247 aa13.38□□□□□ -0.27
PSEN1-208ENST00000553719 BLNKQ8WV28 456 aa13.38□□□□□ -0.27
PSEN1-208ENST00000553719 TMPRSS5Q9H3S3 457 aa13.38□□□□□ -0.27
PSEN1-208ENST00000553719 TMEM167BQ9NRX6 74 aa13.38□□□□□ -0.27
PSEN1-208ENST00000553719 K7EIL1 84 aa13.37□□□□□ -0.27
PSEN1-208ENST00000553719 PRB2P02812 416 aaPredicted RBP13.37□□□□□ -0.27
PSEN1-208ENST00000553719 CMC4P56277 68 aaPredicted RBP13.37□□□□□ -0.27
PSEN1-208ENST00000553719 DEFB131AP59861 70 aa13.37□□□□□ -0.27
PSEN1-208ENST00000553719 ZNF124Q15973 351 aa13.37□□□□□ -0.27
PSEN1-208ENST00000553719 PSMG4Q5JS54 123 aa13.37□□□□□ -0.27
PSEN1-208ENST00000553719 LYPD1Q8N2G4 141 aa13.37□□□□□ -0.27
PSEN1-208ENST00000553719 ZNF680Q8NEM1 530 aa13.37□□□□□ -0.27
PSEN1-208ENST00000553719 SFT2D1Q8WV19 159 aa13.37□□□□□ -0.27
PSEN1-208ENST00000553719 CITED4Q96RK1 184 aa13.37□□□□□ -0.27
PSEN1-208ENST00000553719 DNAH9Q9NYC9 4486 aa13.37□□□□□ -0.27
PSEN1-208ENST00000553719 PSG9Q00887 426 aa13.36□□□□□ -0.27
PSEN1-208ENST00000553719 PSG3Q16557 428 aa13.36□□□□□ -0.27
PSEN1-208ENST00000553719 APRG1Q8IVJ8 170 aa13.36□□□□□ -0.27
PSEN1-208ENST00000553719 CLEC5AQ9NY25 188 aa13.36□□□□□ -0.27
PSEN1-208ENST00000553719 FBN3Q75N90 2809 aa13.35□□□□□ -0.27
PSEN1-208ENST00000553719 ZNF705EA8MWA4 302 aaPredicted RBP13.35□□□□□ -0.27
PSEN1-208ENST00000553719 A8MZ25 164 aa13.35□□□□□ -0.27
PSEN1-208ENST00000553719 DEFB1P60022 68 aa13.35□□□□□ -0.27
PSEN1-208ENST00000553719 EXOC3-AS1Q8N2X6 119 aa13.35□□□□□ -0.27
PSEN1-208ENST00000553719 DEFB125Q8N687 156 aa13.35□□□□□ -0.27
PSEN1-208ENST00000553719 LYPD6BQ8NI32 183 aa13.35□□□□□ -0.27
PSEN1-208ENST00000553719 LRRC20Q8TCA0 184 aa13.35□□□□□ -0.27
PSEN1-208ENST00000553719 MRPL53Q96EL3 112 aaKnown RBP13.35□□□□□ -0.27
PSEN1-208ENST00000553719 M0R3E3 92 aa13.34□□□□□ -0.27
PSEN1-208ENST00000553719 RANP62826 216 aaKnown RBP13.34□□□□□ -0.27
PSEN1-208ENST00000553719 CCL20P78556 96 aa13.34□□□□□ -0.27
PSEN1-208ENST00000553719 IFITM2Q01629 132 aa13.34□□□□□ -0.27
PSEN1-208ENST00000553719 LINC00052Q96N35 136 aa13.34□□□□□ -0.27
PSEN1-208ENST00000553719 Q9H3A6 140 aa13.34□□□□□ -0.27
PSEN1-208ENST00000553719 OTORQ9NRC9 128 aa13.34□□□□□ -0.27
PSEN1-208ENST00000553719 A0A1W2PRE2 83 aa13.33□□□□□ -0.28
PSEN1-208ENST00000553719 GGTLC3B5MD39 225 aa13.33□□□□□ -0.28
PSEN1-208ENST00000553719 IFNA7P01567 189 aa13.33□□□□□ -0.28
PSEN1-208ENST00000553719 ICAM4Q14773 271 aa13.33□□□□□ -0.28
PSEN1-208ENST00000553719 GDF5OSQ5U4N7 250 aa13.33□□□□□ -0.28
PSEN1-208ENST00000553719 FOXI2Q6ZQN5 318 aa13.33□□□□□ -0.28
PSEN1-208ENST00000553719 SAV1Q9H4B6 383 aaPredicted RBP13.33□□□□□ -0.28
PSEN1-208ENST00000553719 YTHDF2Q9Y5A9 579 aaKnown RBP13.33□□□□□ -0.28
PSEN1-208ENST00000553719 ARL2-SNX15V9GYD0 113 aa13.33□□□□□ -0.28
PSEN1-208ENST00000553719 AGRNO00468 2067 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms