RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 UQCC1Q9NVA1 299 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 MRPL27Q9P0M9 148 aaKnown RBP4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 DOK5Q9P104 306 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 VAX2Q9UIW0 290 aa4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 AK6Q9Y3D8 172 aaKnown RBP4.1□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TRBV9A0A0B4J1U6 114 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 IRGMA1A4Y4 181 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CGB1A6NKQ9 187 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 LGALS9O00182 355 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 MFNGO00587 321 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 DEFB4AO15263 64 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RBFOX2O43251 390 aaKnown RBP eCLIP4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SIX6O95475 246 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TMEM50AO95807 157 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 REG1AP05451 166 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SAA1P0DJI8 122 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR10J1P30954 320 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 FCGR2BP31994 310 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ID1P41134 155 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 NPBWR1P48145 328 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GAGE5Q13069 117 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GAGE6Q13070 117 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ANXA2RQ3ZCQ2 193 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 FAM106AQ4KMX7 169 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR4A47Q6IF82 309 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ALKAL2Q6UX46 152 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 UNQ9165/PRO28630Q6UXU0 137 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 Q6ZWC4 215 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ZNF367Q7RTV3 350 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 VKORC1L1Q8N0U8 176 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TTC9CQ8N5M4 171 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SLC35G3Q8N808 338 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TEX45Q8NA69 505 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR5B3Q8NH48 314 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR52E5Q8NH55 327 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 C11orf45Q8TAV5 145 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 MOB3AQ96BX8 217 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RNF183Q96D59 192 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ARHGAP5-AS1Q96IT6 56 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SPIN2AQ99865 258 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SPIN2BQ9BPZ2 258 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SOSTQ9BQB4 213 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TM2D1Q9BX74 207 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SPANXCQ9NY87 97 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 NAT8Q9UHE5 227 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RAB22AQ9UL26 194 aa4.09□□□□□ -1.75
SMARCE1P3-201ENST00000553649 IGHV3OR16-8A0A075B7F1 116 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 TRBV6-6A0A0A6YYG2 114 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 LINC00473A8K010 186 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 IGLL5B9A064 214 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 CREBL2O60519 120 aaPredicted RBP4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 FCGR3BO75015 233 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 S1PR2O95136 353 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 DEFA4P12838 97 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 CXCL2P19875 107 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 GADD45AP24522 165 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 GPR183P32249 361 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 RPL29P47914 159 aaKnown RBP4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 TAS2R43P59537 309 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 FABP5Q01469 135 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 ST3GAL4Q11206 333 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 FAM78BQ5VT40 261 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 ZNF705AQ6ZN79 300 aaPredicted RBP4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 LRRTM1Q86UE6 522 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 SLC25A42Q86VD7 318 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 GPHB5Q86YW7 130 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 ZNF485Q8NCK3 441 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 EEF1AKMT3Q96AZ1 226 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 DIRAS2Q96HU8 199 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 OR2A7Q96R45 310 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 PECRQ9BY49 303 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 LPAR5Q9H1C0 372 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 OR5AC2Q9NZP5 309 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 C14orf166Q9Y224 244 aaKnown RBP4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 TP53TG1Q9Y2A0 90 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 ZNF257Q9Y2Q1 563 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 OR51B2Q9Y5P1 312 aa4.08□□□□□ -1.76
SMARCE1P3-201ENST00000553649 IFITM5A6NNB3 132 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 SNRPGP15A8MWD9 76 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 TMEM14DPA8MWL7 114 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 G3V3Q6 166 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 ZNF207O43670 478 aaKnown RBP4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 TYMSP04818 313 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 ESDP10768 282 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 FABP4P15090 132 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 MYOD1P15172 320 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 DUTP33316 252 aaKnown RBP4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 RPL27AP46776 148 aaKnown RBP4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 TFPI2P48307 235 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 PLP1P60201 277 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 RPL32P62910 135 aaKnown RBP4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 QRFPP83859 136 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 ZNF345Q14585 488 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 ODF3L2Q3SX64 289 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 TMEM128Q5BJH2 165 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 PDZD11Q5EBL8 140 aa4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 COA6Q5JTJ3 125 aaKnown RBP4.07□□□□□ -1.76
SMARCE1P3-201ENST00000553649 C1orf100Q5SVJ3 147 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms