RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 A0A087X0K7 114 aa12.99□□□□□ -0.33
SHMT2-206ENST00000553529 DEFB131BA0A096LNP1 70 aa12.99□□□□□ -0.33
SHMT2-206ENST00000553529 FNDC10F2Z333 226 aa12.99□□□□□ -0.33
SHMT2-206ENST00000553529 H3BQ15 152 aa12.99□□□□□ -0.33
SHMT2-206ENST00000553529 HIST1H1AQ02539 215 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-206ENST00000553529 TMEM252Q8N6L7 170 aa12.99□□□□□ -0.33
SHMT2-206ENST00000553529 CLUHP3Q96NS8 147 aa12.99□□□□□ -0.33
SHMT2-206ENST00000553529 NEU1Q99519 415 aa12.99□□□□□ -0.33
SHMT2-206ENST00000553529 YTHDF2Q9Y5A9 579 aaKnown RBP12.99□□□□□ -0.33
SHMT2-206ENST00000553529 LOC102723971A0A1B0GUV8 181 aa12.98□□□□□ -0.33
SHMT2-206ENST00000553529 RPL7P18124 248 aaKnown RBP12.98□□□□□ -0.33
SHMT2-206ENST00000553529 AZU1P20160 251 aa12.98□□□□□ -0.33
SHMT2-206ENST00000553529 SELENOTP62341 195 aa12.98□□□□□ -0.33
SHMT2-206ENST00000553529 GCSAMLQ5JQS6 135 aa12.98□□□□□ -0.33
SHMT2-206ENST00000553529 ZNF546Q86UE3 836 aa12.98□□□□□ -0.33
SHMT2-206ENST00000553529 GPR82Q96P67 336 aa12.98□□□□□ -0.33
SHMT2-206ENST00000553529 OR5AC2Q9NZP5 309 aa12.98□□□□□ -0.33
SHMT2-206ENST00000553529 DKK2Q9UBU2 259 aa12.98□□□□□ -0.33
SHMT2-206ENST00000553529 C11orf94C9JXX5 98 aa12.97□□□□□ -0.33
SHMT2-206ENST00000553529 H0YIZ8 118 aa12.97□□□□□ -0.33
SHMT2-206ENST00000553529 COX7A2P2O60397 106 aa12.97□□□□□ -0.33
SHMT2-206ENST00000553529 HTN3P15516 51 aa12.97□□□□□ -0.33
SHMT2-206ENST00000553529 CAMLGP49069 296 aa12.97□□□□□ -0.33
SHMT2-206ENST00000553529 FCN2Q15485 313 aa12.97□□□□□ -0.33
SHMT2-206ENST00000553529 LRRC37A5PQ49AS3 106 aa12.97□□□□□ -0.33
SHMT2-206ENST00000553529 LYRM2Q9NU23 88 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-206ENST00000553529 WDR83OSQ9Y284 106 aa12.97□□□□□ -0.33
SHMT2-206ENST00000553529 RFNGQ9Y644 331 aa12.97□□□□□ -0.33
SHMT2-206ENST00000553529 NHLH2Q02577 135 aa12.96□□□□□ -0.33
SHMT2-206ENST00000553529 PSG3Q16557 428 aa12.96□□□□□ -0.33
SHMT2-206ENST00000553529 VWC2Q2TAL6 325 aa12.96□□□□□ -0.33
SHMT2-206ENST00000553529 MZT2BQ6NZ67 158 aa12.96□□□□□ -0.33
SHMT2-206ENST00000553529 OR8A1Q8NGG7 326 aa12.96□□□□□ -0.33
SHMT2-206ENST00000553529 ENKURQ8TC29 256 aa12.96□□□□□ -0.33
SHMT2-206ENST00000553529 S100ZQ8WXG8 99 aa12.96□□□□□ -0.33
SHMT2-206ENST00000553529 IGF2BP2-AS1Q96M15 143 aa12.96□□□□□ -0.33
SHMT2-206ENST00000553529 UQCC1Q9NVA1 299 aa12.96□□□□□ -0.33
SHMT2-206ENST00000553529 GOLT1BQ9Y3E0 138 aa12.96□□□□□ -0.33
SHMT2-206ENST00000553529 IGLC2P0DOY2 106 aa12.95□□□□□ -0.34
SHMT2-206ENST00000553529 SULT1A1P50225 295 aa12.95□□□□□ -0.34
SHMT2-206ENST00000553529 BAXQ07812 192 aa12.95□□□□□ -0.34
SHMT2-206ENST00000553529 C10orf113Q5VZT2 155 aa12.95□□□□□ -0.34
SHMT2-206ENST00000553529 SPATA31B1PQ5VZV4 182 aa12.95□□□□□ -0.34
SHMT2-206ENST00000553529 THAP6Q8TBB0 222 aa12.95□□□□□ -0.34
SHMT2-206ENST00000553529 RPUSD4Q96CM3 377 aaKnown RBP12.95□□□□□ -0.34
SHMT2-206ENST00000553529 GGACTQ9BVM4 153 aa12.95□□□□□ -0.34
SHMT2-206ENST00000553529 ZNF331Q9NQX6 463 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-206ENST00000553529 PLAC8L1A1L4L8 177 aa12.94□□□□□ -0.34
SHMT2-206ENST00000553529 BOLA2-SMG1P6H3BVE0 249 aa12.94□□□□□ -0.34
SHMT2-206ENST00000553529 HBE1P02100 147 aa12.94□□□□□ -0.34
SHMT2-206ENST00000553529 SPART-AS1P0CW21 52 aa12.94□□□□□ -0.34
SHMT2-206ENST00000553529 FGF7P21781 194 aa12.94□□□□□ -0.34
SHMT2-206ENST00000553529 RHOBP62745 196 aa12.94□□□□□ -0.34
SHMT2-206ENST00000553529 LRRC20Q8TCA0 184 aa12.94□□□□□ -0.34
SHMT2-206ENST00000553529 GPN1Q9HCN4 374 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-206ENST00000553529 ZNF586Q9NXT0 402 aa12.94□□□□□ -0.34
SHMT2-206ENST00000553529 J3KRW8 73 aa12.93□□□□□ -0.34
SHMT2-206ENST00000553529 AMBPP02760 352 aa12.93□□□□□ -0.34
SHMT2-206ENST00000553529 SAMD13Q5VXD3 122 aa12.93□□□□□ -0.34
SHMT2-206ENST00000553529 LINC00299Q6ZSB3 139 aa12.93□□□□□ -0.34
SHMT2-206ENST00000553529 TMEM208Q9BTX3 173 aa12.93□□□□□ -0.34
SHMT2-206ENST00000553529 SLC39A9Q9NUM3 307 aa12.93□□□□□ -0.34
SHMT2-206ENST00000553529 SMIM9A6NGZ8 99 aa12.92□□□□□ -0.34
SHMT2-206ENST00000553529 DUSP14O95147 198 aaKnown RBP12.92□□□□□ -0.34
SHMT2-206ENST00000553529 INSP01308 110 aa12.92□□□□□ -0.34
SHMT2-206ENST00000553529 PYYP10082 97 aa12.92□□□□□ -0.34
SHMT2-206ENST00000553529 HTN1P15515 57 aa12.92□□□□□ -0.34
SHMT2-206ENST00000553529 H2BFSP57053 126 aa12.92□□□□□ -0.34
SHMT2-206ENST00000553529 B2MP61769 119 aa12.92□□□□□ -0.34
SHMT2-206ENST00000553529 RRN3P1Q2M238 152 aa12.92□□□□□ -0.34
SHMT2-206ENST00000553529 SAT2Q96F10 170 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-206ENST00000553529 NIPSNAP3BQ9BS92 247 aa12.92□□□□□ -0.34
SHMT2-206ENST00000553529 RNF126Q9BV68 326 aa12.92□□□□□ -0.34
SHMT2-206ENST00000553529 PXMP4Q9Y6I8 212 aa12.92□□□□□ -0.34
SHMT2-206ENST00000553529 INMT-MINDY4F8WBC2 141 aa12.91□□□□□ -0.34
SHMT2-206ENST00000553529 EIF3GO75821 320 aaKnown RBP eCLIP12.91□□□□□ -0.34
SHMT2-206ENST00000553529 PVALBP20472 110 aaPredicted RBP12.91□□□□□ -0.34
SHMT2-206ENST00000553529 CLINT1Q14677 625 aa12.91□□□□□ -0.34
SHMT2-206ENST00000553529 DNAJC4Q9NNZ3 241 aa12.91□□□□□ -0.34
SHMT2-206ENST00000553529 DNAH2Q9P225 4427 aa12.9□□□□□ -0.34
SHMT2-206ENST00000553529 M0R3E3 92 aa12.9□□□□□ -0.34
SHMT2-206ENST00000553529 PXDC1Q5TGL8 231 aa12.9□□□□□ -0.34
SHMT2-206ENST00000553529 LCN15Q6UWW0 184 aa12.9□□□□□ -0.34
SHMT2-206ENST00000553529 BPIFA4PQ86YQ2 179 aa12.9□□□□□ -0.34
SHMT2-206ENST00000553529 OR5C1Q8NGR4 320 aa12.9□□□□□ -0.34
SHMT2-206ENST00000553529 M0R2N4 97 aa12.89□□□□□ -0.35
SHMT2-206ENST00000553529 S100A11P31949 105 aa12.89□□□□□ -0.35
SHMT2-206ENST00000553529 RPL29P47914 159 aaKnown RBP12.89□□□□□ -0.35
SHMT2-206ENST00000553529 STX12Q86Y82 276 aa12.89□□□□□ -0.35
SHMT2-206ENST00000553529 NPCDR1Q9BY65 106 aa12.89□□□□□ -0.35
SHMT2-206ENST00000553529 TMEM189A5PLL7 270 aa12.88□□□□□ -0.35
SHMT2-206ENST00000553529 NDUFB4O95168 129 aa12.88□□□□□ -0.35
SHMT2-206ENST00000553529 DEFB130BP0DP73 79 aa12.88□□□□□ -0.35
SHMT2-206ENST00000553529 DEFB130AP0DP74 79 aa12.88□□□□□ -0.35
SHMT2-206ENST00000553529 S100A7P31151 101 aa12.88□□□□□ -0.35
SHMT2-206ENST00000553529 ERCC8Q13216 396 aa12.88□□□□□ -0.35
SHMT2-206ENST00000553529 TMEM88Q6PEY1 159 aa12.88□□□□□ -0.35
SHMT2-206ENST00000553529 Q6ZRG5 221 aa12.88□□□□□ -0.35
SHMT2-206ENST00000553529 MIR17HGQ75NE6 70 aa12.88□□□□□ -0.35
SHMT2-206ENST00000553529 LINC01587Q99440 93 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms