RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 DEFB1P60022 68 aa13.45□□□□□ -0.26
CPSF2-202ENST00000553427 CSNK1G2-AS1Q8NCQ2 148 aa13.45□□□□□ -0.26
CPSF2-202ENST00000553427 RARRES2Q99969 163 aa13.45□□□□□ -0.26
CPSF2-202ENST00000553427 SMIM3Q9BZL3 60 aa13.45□□□□□ -0.26
CPSF2-202ENST00000553427 C11orf68Q9H3H3 251 aaKnown RBP13.45□□□□□ -0.26
CPSF2-202ENST00000553427 WFDC1Q9HC57 220 aa13.45□□□□□ -0.26
CPSF2-202ENST00000553427 ZNF331Q9NQX6 463 aaPredicted RBP13.45□□□□□ -0.26
CPSF2-202ENST00000553427 CLEC5AQ9NY25 188 aa13.45□□□□□ -0.26
CPSF2-202ENST00000553427 ZNF705EA8MWA4 302 aaPredicted RBP13.44□□□□□ -0.26
CPSF2-202ENST00000553427 ZNF253O75346 499 aa13.44□□□□□ -0.26
CPSF2-202ENST00000553427 Q5BKY6 102 aa13.44□□□□□ -0.26
CPSF2-202ENST00000553427 GCSAMLQ5JQS6 135 aa13.44□□□□□ -0.26
CPSF2-202ENST00000553427 RNF182Q8N6D2 247 aa13.44□□□□□ -0.26
CPSF2-202ENST00000553427 OR11H2Q8NH07 326 aa13.44□□□□□ -0.26
CPSF2-202ENST00000553427 SCGB1C1Q8TD33 95 aa13.44□□□□□ -0.26
CPSF2-202ENST00000553427 MRPL32Q9BYC8 188 aaKnown RBP13.44□□□□□ -0.26
CPSF2-202ENST00000553427 TRAV5A0A0B4J249 113 aa13.43□□□□□ -0.26
CPSF2-202ENST00000553427 A0A0J9YWU9 116 aa13.43□□□□□ -0.26
CPSF2-202ENST00000553427 F6UB75 175 aa13.43□□□□□ -0.26
CPSF2-202ENST00000553427 H3BQ15 152 aa13.43□□□□□ -0.26
CPSF2-202ENST00000553427 DUSP14O95147 198 aaKnown RBP13.43□□□□□ -0.26
CPSF2-202ENST00000553427 ZNF266Q14584 549 aa13.43□□□□□ -0.26
CPSF2-202ENST00000553427 PSG3Q16557 428 aa13.43□□□□□ -0.26
CPSF2-202ENST00000553427 CASC10Q5T4H9 136 aa13.43□□□□□ -0.26
CPSF2-202ENST00000553427 FAM78BQ5VT40 261 aa13.43□□□□□ -0.26
CPSF2-202ENST00000553427 IGFL4Q6B9Z1 124 aa13.43□□□□□ -0.26
CPSF2-202ENST00000553427 ZNF738Q8NE65 137 aa13.43□□□□□ -0.26
CPSF2-202ENST00000553427 OR2T35Q8NGX2 323 aa13.43□□□□□ -0.26
CPSF2-202ENST00000553427 LRRC20Q8TCA0 184 aa13.43□□□□□ -0.26
CPSF2-202ENST00000553427 SAT2Q96F10 170 aaPredicted RBP13.43□□□□□ -0.26
CPSF2-202ENST00000553427 DYNC2H1Q8NCM8 4307 aaKnown RBP13.42□□□□□ -0.26
CPSF2-202ENST00000553427 PSG9Q00887 426 aa13.42□□□□□ -0.26
CPSF2-202ENST00000553427 TIMM9Q9Y5J7 89 aa13.42□□□□□ -0.26
CPSF2-202ENST00000553427 G3V3Q6 166 aa13.41□□□□□ -0.26
CPSF2-202ENST00000553427 SLC17A3O00476 420 aa13.41□□□□□ -0.26
CPSF2-202ENST00000553427 HIST1H1EP10412 219 aaKnown RBP13.41□□□□□ -0.26
CPSF2-202ENST00000553427 PDE6HQ13956 83 aa13.41□□□□□ -0.26
CPSF2-202ENST00000553427 AMTNQ6UX39 209 aa13.41□□□□□ -0.26
CPSF2-202ENST00000553427 OR4B1Q8NGF8 309 aa13.41□□□□□ -0.26
CPSF2-202ENST00000553427 FAM167A-AS1Q96KT0 104 aa13.41□□□□□ -0.26
CPSF2-202ENST00000553427 XCL2Q9UBD3 114 aa13.41□□□□□ -0.26
CPSF2-202ENST00000553427 TNFSF18Q9UNG2 199 aa13.41□□□□□ -0.26
CPSF2-202ENST00000553427 FUT9Q9Y231 359 aa13.41□□□□□ -0.26
CPSF2-202ENST00000553427 TRBV19A0A075B6N1 114 aa13.4□□□□□ -0.26
CPSF2-202ENST00000553427 IGKV3-20P01619 116 aa13.4□□□□□ -0.26
CPSF2-202ENST00000553427 MIFP14174 115 aa13.4□□□□□ -0.26
CPSF2-202ENST00000553427 HLA-DMBP28068 263 aa13.4□□□□□ -0.26
CPSF2-202ENST00000553427 CNN1P51911 297 aaKnown RBP13.4□□□□□ -0.26
CPSF2-202ENST00000553427 FFAR4Q5NUL3 377 aa13.4□□□□□ -0.26
CPSF2-202ENST00000553427 MIR17HGQ75NE6 70 aa13.4□□□□□ -0.26
CPSF2-202ENST00000553427 Q8NAQ8 132 aa13.4□□□□□ -0.26
CPSF2-202ENST00000553427 INO80EQ8NBZ0 244 aaPredicted RBP13.4□□□□□ -0.26
CPSF2-202ENST00000553427 OR8A1Q8NGG7 326 aa13.4□□□□□ -0.26
CPSF2-202ENST00000553427 SLC25A2Q9BXI2 301 aa13.4□□□□□ -0.26
CPSF2-202ENST00000553427 ZNF586Q9NXT0 402 aa13.4□□□□□ -0.26
CPSF2-202ENST00000553427 X6R8D5 127 aa13.4□□□□□ -0.26
CPSF2-202ENST00000553427 RNF222A6NCQ9 220 aa13.39□□□□□ -0.27
CPSF2-202ENST00000553427 AMBPP02760 352 aa13.39□□□□□ -0.27
CPSF2-202ENST00000553427 ZNF705AQ6ZN79 300 aaPredicted RBP13.39□□□□□ -0.27
CPSF2-202ENST00000553427 RPUSD4Q96CM3 377 aaKnown RBP13.39□□□□□ -0.27
CPSF2-202ENST00000553427 MRPL53Q96EL3 112 aaKnown RBP13.39□□□□□ -0.27
CPSF2-202ENST00000553427 FXYD6-FXYD2A0A087WZ82 144 aa13.38□□□□□ -0.27
CPSF2-202ENST00000553427 OR2G3Q8NGZ4 309 aa13.38□□□□□ -0.27
CPSF2-202ENST00000553427 NEU1Q99519 415 aa13.38□□□□□ -0.27
CPSF2-202ENST00000553427 MFFQ9GZY8 342 aa13.38□□□□□ -0.27
CPSF2-202ENST00000553427 SLC35B3Q9H1N7 401 aa13.38□□□□□ -0.27
CPSF2-202ENST00000553427 ZNF705FA8MVS1 300 aaPredicted RBP13.37□□□□□ -0.27
CPSF2-202ENST00000553427 H3BTX0 84 aa13.37□□□□□ -0.27
CPSF2-202ENST00000553427 SNRPCP09234 159 aaKnown RBP13.37□□□□□ -0.27
CPSF2-202ENST00000553427 ZNF705DP0CH99 300 aaPredicted RBP13.37□□□□□ -0.27
CPSF2-202ENST00000553427 ZNF705BP0CI00 300 aaPredicted RBP13.37□□□□□ -0.27
CPSF2-202ENST00000553427 PYYP10082 97 aa13.37□□□□□ -0.27
CPSF2-202ENST00000553427 RHOBP62745 196 aa13.37□□□□□ -0.27
CPSF2-202ENST00000553427 PSMG3Q9BT73 122 aaPredicted RBP13.37□□□□□ -0.27
CPSF2-202ENST00000553427 PRELID1Q9Y255 219 aa13.37□□□□□ -0.27
CPSF2-202ENST00000553427 IGHV4-28A0A0C4DH34 117 aa13.36□□□□□ -0.27
CPSF2-202ENST00000553427 NDUFB4O95168 129 aa13.36□□□□□ -0.27
CPSF2-202ENST00000553427 M6PRP20645 277 aa13.36□□□□□ -0.27
CPSF2-202ENST00000553427 HIST1H1AQ02539 215 aaPredicted RBP13.36□□□□□ -0.27
CPSF2-202ENST00000553427 ACOT6Q3I5F7 207 aaPredicted RBP13.36□□□□□ -0.27
CPSF2-202ENST00000553427 ZFAND6Q6FIF0 208 aa13.36□□□□□ -0.27
CPSF2-202ENST00000553427 IGF2BP2-AS1Q96M15 143 aa13.36□□□□□ -0.27
CPSF2-202ENST00000553427 OR51M1Q9H341 326 aa13.36□□□□□ -0.27
CPSF2-202ENST00000553427 BOLA2-SMG1P6H3BVE0 249 aa13.35□□□□□ -0.27
CPSF2-202ENST00000553427 FXYD7P58549 80 aa13.35□□□□□ -0.27
CPSF2-202ENST00000553427 TAS2R45P59539 299 aa13.35□□□□□ -0.27
CPSF2-202ENST00000553427 KHDC3LQ587J8 217 aa13.35□□□□□ -0.27
CPSF2-202ENST00000553427 FXYD5Q96DB9 178 aa13.35□□□□□ -0.27
CPSF2-202ENST00000553427 PAXXQ9BUH6 204 aa13.35□□□□□ -0.27
CPSF2-202ENST00000553427 TENM2Q9NT68 2774 aa13.35□□□□□ -0.27
CPSF2-202ENST00000553427 LYSTQ99698 3801 aa13.34□□□□□ -0.27
CPSF2-202ENST00000553427 SMIM9A6NGZ8 99 aa13.34□□□□□ -0.27
CPSF2-202ENST00000553427 NBEAP1P0C6P0 100 aa13.34□□□□□ -0.27
CPSF2-202ENST00000553427 RBMY1A1P0DJD3 496 aaKnown RBP13.34□□□□□ -0.27
CPSF2-202ENST00000553427 RBMY1CP0DJD4 496 aa13.34□□□□□ -0.27
CPSF2-202ENST00000553427 RBMY1FQ15415 496 aaKnown RBP13.34□□□□□ -0.27
CPSF2-202ENST00000553427 OR10J6PQ8NGY7 276 aa13.34□□□□□ -0.27
CPSF2-202ENST00000553427 RNF141Q8WVD5 230 aa13.34□□□□□ -0.27
CPSF2-202ENST00000553427 GOLT1BQ9Y3E0 138 aa13.34□□□□□ -0.27
CPSF2-202ENST00000553427 PLECQ15149 4684 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms