RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 LGALS9BQ3B8N2 356 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 TMEM256Q8N2U0 113 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 C15orf53Q8NAA6 179 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 ZBTB8BQ8NAP8 495 aaPredicted RBP9.06□□□□□ -0.96
LINC00643-202ENST00000553426 OR8A1Q8NGG7 326 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 MITD1Q8WV92 249 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 LINC01587Q99440 93 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 GGACTQ9BVM4 153 aa9.06□□□□□ -0.96
LINC00643-202ENST00000553426 DNAH11Q96DT5 4516 aa9.05□□□□□ -0.96
LINC00643-202ENST00000553426 PRSS29PA6NIE9 313 aa9.05□□□□□ -0.96
LINC00643-202ENST00000553426 ZNF705GA8MUZ8 300 aaPredicted RBP9.05□□□□□ -0.96
LINC00643-202ENST00000553426 CCNKO75909 580 aa9.05□□□□□ -0.96
LINC00643-202ENST00000553426 IL7P13232 177 aa9.05□□□□□ -0.96
LINC00643-202ENST00000553426 CXCL2P19875 107 aa9.05□□□□□ -0.96
LINC00643-202ENST00000553426 SOHLH1Q5JUK2 328 aa9.05□□□□□ -0.96
LINC00643-202ENST00000553426 TMEM88Q6PEY1 159 aa9.05□□□□□ -0.96
LINC00643-202ENST00000553426 LCN15Q6UWW0 184 aa9.05□□□□□ -0.96
LINC00643-202ENST00000553426 LINC00305Q7Z4B0 112 aa9.05□□□□□ -0.96
LINC00643-202ENST00000553426 BPIFA4PQ86YQ2 179 aa9.05□□□□□ -0.96
LINC00643-202ENST00000553426 BAP18Q8IXM2 172 aa9.05□□□□□ -0.96
LINC00643-202ENST00000553426 PKHD1P08F94 4074 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 C7orf66A4D0T2 115 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 FAM25EA8MYX2 175 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 AGPAT2O15120 278 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 CRXO43186 299 aaPredicted RBP9.04□□□□□ -0.96
LINC00643-202ENST00000553426 COX7A2P2O60397 106 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 DEFB130BP0DP73 79 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 DEFB130AP0DP74 79 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 BTCP35070 178 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 BCAP31P51572 246 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 Q6ZRG5 221 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 RPUSD4Q96CM3 377 aaKnown RBP9.04□□□□□ -0.96
LINC00643-202ENST00000553426 SDHCQ99643 169 aaPredicted RBP9.04□□□□□ -0.96
LINC00643-202ENST00000553426 SLC50A1Q9BRV3 221 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 ATG101Q9BSB4 218 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 C20orf85Q9H1P6 137 aa9.04□□□□□ -0.96
LINC00643-202ENST00000553426 RCL1Q9Y2P8 373 aaKnown RBP9.04□□□□□ -0.96
LINC00643-202ENST00000553426 IGLV2-18A0A075B6J9 118 aa9.03□□□□□ -0.96
LINC00643-202ENST00000553426 LYRM1O43325 122 aa9.03□□□□□ -0.96
LINC00643-202ENST00000553426 MBPP02686 304 aaPredicted RBP9.03□□□□□ -0.96
LINC00643-202ENST00000553426 HTN1P15515 57 aa9.03□□□□□ -0.96
LINC00643-202ENST00000553426 PVALBP20472 110 aaPredicted RBP9.03□□□□□ -0.96
LINC00643-202ENST00000553426 CDKN1BP46527 198 aa9.03□□□□□ -0.96
LINC00643-202ENST00000553426 TAS2R60P59551 318 aa9.03□□□□□ -0.96
LINC00643-202ENST00000553426 PATE2Q6UY27 113 aa9.03□□□□□ -0.96
LINC00643-202ENST00000553426 C16orf74Q96GX8 76 aa9.03□□□□□ -0.96
LINC00643-202ENST00000553426 C5orf51A6NDU8 294 aa9.02□□□□□ -0.97
LINC00643-202ENST00000553426 F5H768 121 aa9.02□□□□□ -0.97
LINC00643-202ENST00000553426 PRM2P04554 102 aa9.02□□□□□ -0.97
LINC00643-202ENST00000553426 ATP5G1P05496 136 aa9.02□□□□□ -0.97
LINC00643-202ENST00000553426 ATP5G3P48201 142 aa9.02□□□□□ -0.97
LINC00643-202ENST00000553426 CAMLGP49069 296 aa9.02□□□□□ -0.97
LINC00643-202ENST00000553426 CAV2P51636 162 aa9.02□□□□□ -0.97
LINC00643-202ENST00000553426 FAM3BP58499 235 aaPredicted RBP9.02□□□□□ -0.97
LINC00643-202ENST00000553426 C10orf113Q5VZT2 155 aa9.02□□□□□ -0.97
LINC00643-202ENST00000553426 ZNF493Q6ZR52 646 aa9.02□□□□□ -0.97
LINC00643-202ENST00000553426 OR10J6PQ8NGY7 276 aa9.02□□□□□ -0.97
LINC00643-202ENST00000553426 ZNF331Q9NQX6 463 aaPredicted RBP9.02□□□□□ -0.97
LINC00643-202ENST00000553426 LSM5Q9Y4Y9 91 aaKnown RBP9.02□□□□□ -0.97
LINC00643-202ENST00000553426 PXMP4Q9Y6I8 212 aa9.02□□□□□ -0.97
LINC00643-202ENST00000553426 TRAV6A0A075B6T7 132 aa9.01□□□□□ -0.97
LINC00643-202ENST00000553426 H7BYZ3 331 aa9.01□□□□□ -0.97
LINC00643-202ENST00000553426 CCSO14618 274 aa9.01□□□□□ -0.97
LINC00643-202ENST00000553426 RTL8CO15255 209 aa9.01□□□□□ -0.97
LINC00643-202ENST00000553426 ARL16Q0P5N6 197 aa9.01□□□□□ -0.97
LINC00643-202ENST00000553426 OR1L4Q8NGR5 311 aa9.01□□□□□ -0.97
LINC00643-202ENST00000553426 C20orf144Q9BQM9 153 aa9.01□□□□□ -0.97
LINC00643-202ENST00000553426 DNAJC4Q9NNZ3 241 aa9.01□□□□□ -0.97
LINC00643-202ENST00000553426 NDUFA13Q9P0J0 144 aa9.01□□□□□ -0.97
LINC00643-202ENST00000553426 TIMM8BQ9Y5J9 83 aaPredicted RBP9.01□□□□□ -0.97
LINC00643-202ENST00000553426 PKD1P98161 4303 aa9□□□□□ -0.97
LINC00643-202ENST00000553426 A0A1B0GVY2 172 aa9□□□□□ -0.97
LINC00643-202ENST00000553426 CBY3A6NI87 242 aa9□□□□□ -0.97
LINC00643-202ENST00000553426 MRPS12O15235 138 aaKnown RBP9□□□□□ -0.97
LINC00643-202ENST00000553426 TCRBP04435 133 aa9□□□□□ -0.97
LINC00643-202ENST00000553426 AZU1P20160 251 aa9□□□□□ -0.97
LINC00643-202ENST00000553426 C1orf134Q5TEV5 83 aa9□□□□□ -0.97
LINC00643-202ENST00000553426 CCDC28AQ8IWP9 274 aa9□□□□□ -0.97
LINC00643-202ENST00000553426 ZNF431Q8TF32 576 aaPredicted RBP9□□□□□ -0.97
LINC00643-202ENST00000553426 TMEM37Q8WXS4 190 aa9□□□□□ -0.97
LINC00643-202ENST00000553426 PFDN5Q99471 154 aa9□□□□□ -0.97
LINC00643-202ENST00000553426 MGST2Q99735 147 aa9□□□□□ -0.97
LINC00643-202ENST00000553426 NUDT15Q9NV35 164 aa9□□□□□ -0.97
LINC00643-202ENST00000553426 UQCC1Q9NVA1 299 aa9□□□□□ -0.97
LINC00643-202ENST00000553426 PLA2G10O15496 165 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 CST7O76096 145 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 NUDT3O95989 172 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 SNRPCP09234 159 aaKnown RBP8.99□□□□□ -0.97
LINC00643-202ENST00000553426 S100A11P31949 105 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 CCL18P55774 89 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 HBG1P69891 147 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 HBG2P69892 147 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 OPCMLQ14982 345 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 FCN2Q15485 313 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 GUK1Q16774 197 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 Q6ZR54 194 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 NRARPQ7Z6K4 114 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 STX12Q86Y82 276 aa8.99□□□□□ -0.97
LINC00643-202ENST00000553426 C12orf45Q8N5I9 185 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms