RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 RSG1Q9BU20 258 aa3.22□□□□□ -1.89
TMEM106C-220ENST00000552561 PARD6GQ9BYG4 376 aaPredicted RBP3.22□□□□□ -1.89
TMEM106C-220ENST00000552561 WDR61Q9GZS3 305 aaKnown RBP3.22□□□□□ -1.89
TMEM106C-220ENST00000552561 ENY2Q9NPA8 101 aa3.22□□□□□ -1.89
TMEM106C-220ENST00000552561 HEYLQ9NQ87 328 aaPredicted RBP3.22□□□□□ -1.89
TMEM106C-220ENST00000552561 MED9Q9NWA0 146 aa3.22□□□□□ -1.89
TMEM106C-220ENST00000552561 S4R3C0 116 aa3.22□□□□□ -1.89
TMEM106C-220ENST00000552561 A0A1W2PS18 150 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 SMCO3A2RU48 225 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 CLN5O75503 358 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 EIF3GO75821 320 aaKnown RBP eCLIP3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 CDK2AP2O75956 126 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 MT-CO2P00403 227 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 AMBPP02760 352 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 PAFAH1B2P68402 229 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 DLK1P80370 383 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 SRSF3P84103 164 aaKnown RBP3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 ZNF726P1Q15940 193 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 C2orf83Q53S99 150 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 SOHLH1Q5JUK2 328 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 EIF5AL1Q6IS14 154 aaKnown RBP3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 OR10P1Q8NGE3 313 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 C11orf45Q8TAV5 145 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 FAM213BQ8TBF2 198 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 PINX1Q96BK5 328 aaKnown RBP3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 GNPNAT1Q96EK6 184 aaPredicted RBP3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 FAM210BQ96KR6 192 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 LINC00052Q96N35 136 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 C18orf15Q96N68 181 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 MGST2Q99735 147 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 PSMG3Q9BT73 122 aaPredicted RBP3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 NPCDR1Q9BY65 106 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 TMEM231Q9H6L2 316 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 UQCC1Q9NVA1 299 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 CACFD1Q9UGQ2 172 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 WDR83OSQ9Y284 106 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 X6R8D5 127 aa3.21□□□□□ -1.9
TMEM106C-220ENST00000552561 TRAV30A0A087WSZ9 112 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 IGHV3-35A0A0C4DH35 117 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 A0A1B0GV50 99 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 PRSS29PA6NIE9 313 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 A8MTW9 85 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 AGPAT2O15120 278 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 GNG7O60262 68 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 IGKV1-17P01599 117 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 IFNA4P05014 189 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 IGLC1P0CG04 106 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 S100A1P23297 94 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 CAMLGP49069 296 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 ATP5IP56385 69 aaPredicted RBP3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 RAB2AP61019 212 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 YPEL3P61236 119 aaPredicted RBP3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 RAB11AP62491 216 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 RPP30P78346 268 aaKnown RBP3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 BLOC1S1P78537 153 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 CCL20P78556 96 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 ERHP84090 104 aaKnown RBP3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 AKR1C1Q04828 323 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 MLANAQ16655 118 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 ATP6V1FQ16864 119 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 Q56UQ5 140 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 GCSAMLQ5JQS6 135 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 AKR1C8PQ5T2L2 129 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 ZNF705AQ6ZN79 300 aaPredicted RBP3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 TCF24Q7RTU0 167 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 APRG1Q8IVJ8 170 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 Q8N1X5 172 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 OR11H2Q8NH07 326 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 LYPD6BQ8NI32 183 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 LRRC20Q8TCA0 184 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 SCGB1C1Q8TD33 95 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 RNASEH2CQ8TDP1 164 aaKnown RBP3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 C2CD4CQ8TF44 421 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 GLMPQ8WWB7 406 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 SAT2Q96F10 170 aaPredicted RBP3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 SCRT1Q9BWW7 348 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 MS4A6AQ9H2W1 248 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 FNDC4Q9H6D8 234 aaPredicted RBP3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 SCRT2Q9NQ03 307 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 MRPL36Q9P0J6 103 aaKnown RBP3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 PFDN2Q9UHV9 154 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 TIMM9Q9Y5J7 89 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 PUS1Q9Y606 427 aaKnown RBP eCLIP3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 LRP1BQ9NZR2 4599 aa3.2□□□□□ -1.9
TMEM106C-220ENST00000552561 IGKV1D-37A0A075B6S9 117 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 IGKV1OR2-108A0A075B7D4 117 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 IGHV3-21A0A0B4J1V1 117 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 TRAV10A0A0B4J240 114 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 MAP1LC3B2A6NCE7 125 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 HELTA6NFD8 242 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 ZNF705FA8MVS1 300 aaPredicted RBP3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 UMAD1C9J7I0 102 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 C9JQL5 133 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 FNDC10F2Z333 226 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 BUB3O43684 328 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 YIF1AO95070 293 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 IGHV3-48P01763 117 aa3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 APOHP02749 345 aaPredicted RBP3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 ZNF705DP0CH99 300 aaPredicted RBP3.19□□□□□ -1.9
TMEM106C-220ENST00000552561 ZNF705BP0CI00 300 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms