RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 SERPINB1P30740 379 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 RPL35P42766 123 aaKnown RBP0.53□□□□□ -2.32
USP44-207ENST00000552237 ATP5G3P48201 142 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 SRP9P49458 86 aaKnown RBP0.53□□□□□ -2.32
USP44-207ENST00000552237 SERPINB9P50453 376 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 DYNLT3P51808 116 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 TMBIM6P55061 237 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 DSCR4P56555 118 aaPredicted RBP0.53□□□□□ -2.32
USP44-207ENST00000552237 GNG5P63218 68 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 PSG9Q00887 426 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 KISS1Q15726 138 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 RTL8BQ17RB0 113 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 VMA21Q3ZAQ7 101 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 LINC00299Q6ZSB3 139 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 OR5AS1Q8N127 324 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 OR10K1Q8NGX5 313 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 PSMF1Q92530 271 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 CHCHD1Q96BP2 118 aaKnown RBP0.53□□□□□ -2.32
USP44-207ENST00000552237 AMELYQ99218 206 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 RTL8AQ9BWD3 113 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 SH3BGRL3Q9H299 93 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 SPANXA1Q9NS26 97 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 SPANXCQ9NY87 97 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 IL20Q9NYY1 176 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 ZFP30Q9Y2G7 519 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 TPRKBQ9Y3C4 175 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 ALPK3Q96L96 1907 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 CAMSAP1Q5T5Y3 1602 aa0.53□□□□□ -2.33
USP44-207ENST00000552237 TANC2Q9HCD6 1990 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 FANCMQ8IYD8 2048 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 TRAV23DV6A0A075B6W5 121 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 PPP5D1E7EU14 171 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 E7EUB6 86 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 TMEM256-PLSCR3K7ERE1 68 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 INE1O15225 51 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 NUPR1O60356 82 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 KLF7O75840 302 aaPredicted RBP0.52□□□□□ -2.33
USP44-207ENST00000552237 IGLV3-1P01715 115 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 TRGC2P03986 189 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 KDELR1P24390 212 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 MRPS36P82909 103 aaKnown RBP0.52□□□□□ -2.33
USP44-207ENST00000552237 SPATA45Q537H7 98 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 DHRS4L2Q6PKH6 230 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 LINC00575Q6W349 94 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 C3orf62Q6ZUJ4 267 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 SMIM15Q7Z3B0 74 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 ARPINQ7Z6K5 226 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 WFDC5Q8TCV5 224 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 SKA2Q8WVK7 121 aaPredicted RBP0.52□□□□□ -2.33
USP44-207ENST00000552237 RAB37Q96AX2 223 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 HYLS1Q96M11 299 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 PRAP1Q96NZ9 151 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 LYSMD1Q96S90 227 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 GINS3Q9BRX5 216 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 LXNQ9BS40 222 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 EFCAB11Q9BUY7 163 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 OR2H1Q9GZK4 316 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 RNASE7Q9H1E1 156 aaKnown RBP0.52□□□□□ -2.33
USP44-207ENST00000552237 NIT2Q9NQR4 276 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 GID8Q9NWU2 228 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 TAS2R7Q9NYW3 318 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 TP73-AS1Q9UF72 201 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 PRNDQ9UKY0 176 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 ROBO3Q96MS0 1386 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 CCDC144AA2RUR9 1427 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 STRCQ7RTU9 1775 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 PTPRDP23468 1912 aa0.52□□□□□ -2.33
USP44-207ENST00000552237 PRORSD1PA6NEY8 169 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 ARL5CA6NH57 179 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 JMJD7-PLA2G4BH0Y9G9 81 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 ARHGEF11O15085 1522 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 CCL16O15467 120 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 CLPSP04118 112 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 FABP2P12104 132 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 TPT1P13693 172 aaKnown RBP0.51□□□□□ -2.33
USP44-207ENST00000552237 ZNF25P17030 456 aaPredicted RBP0.51□□□□□ -2.33
USP44-207ENST00000552237 SRIP30626 198 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 HOXA6P31267 233 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 CAPZBP47756 277 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 KNTC1P50748 2209 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 TAS2R41P59536 307 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 ERVS71-1P61550 626 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 HBBP68871 147 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 N4BP2Q86UW6 1770 aaPredicted RBP0.51□□□□□ -2.33
USP44-207ENST00000552237 ANGPTL5Q86XS5 388 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 ARHGEF28Q8N1W1 1705 aaKnown RBP0.51□□□□□ -2.33
USP44-207ENST00000552237 FAM216BQ8N7L0 139 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 ADGBQ8N7X0 1667 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 NUP35Q8NFH5 326 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 PPP1R1CQ8WVI7 109 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 BORCS8Q96FH0 119 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 OR4C12Q96R67 309 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 VPS25Q9BRG1 176 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 PARD6GQ9BYG4 376 aaPredicted RBP0.51□□□□□ -2.33
USP44-207ENST00000552237 CST11Q9H112 138 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 ADGRL3Q9HAR2 1447 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 PLXNA4Q9HCM2 1894 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 NUBP2Q9Y5Y2 271 aa0.51□□□□□ -2.33
USP44-207ENST00000552237 SYNMO15061 1565 aa0.5□□□□□ -2.33
USP44-207ENST00000552237 PCF11O94913 1555 aaKnown RBP0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms