RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 CDS2O95674 445 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 SNRPCP09234 159 aaKnown RBP9.52□□□□□ -0.89
VPS29-209ENST00000551655 ODF1Q14990 250 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 UBE2NLQ5JXB2 153 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 C10orf126Q8N4M7 172 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 SAMD12Q8N8I0 201 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 LRTM2Q8N967 370 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 CHAC1Q9BUX1 264 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 TMEM222Q9H0R3 208 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 VCXQ9H320 206 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 RBKSQ9H477 322 aa9.52□□□□□ -0.89
VPS29-209ENST00000551655 LINC00854A0A1B0GVQ3 168 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 E5RGE8 158 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 K7EQD1 137 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 TGFBR1P36897 503 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 GPX4P36969 197 aaPredicted RBP9.51□□□□□ -0.89
VPS29-209ENST00000551655 TMEM268Q5VZI3 342 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 SNX29P2Q8IUI4 249 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 THAP8Q8NA92 274 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 OR13C8Q8NGS7 320 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 DTD1Q8TEA8 209 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 GLYATL2Q8WU03 294 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 RBPMSQ93062 196 aaKnown RBP9.51□□□□□ -0.89
VPS29-209ENST00000551655 ST6GAL2Q96JF0 529 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 GPR82Q96P67 336 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 DNAJC4Q9NNZ3 241 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 MRPL16Q9NX20 251 aaKnown RBP9.51□□□□□ -0.89
VPS29-209ENST00000551655 PRR13Q9NZ81 148 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 HHLA3Q9XRX5 114 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 TMEM56-RWDD3S4R434 201 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 U3KQ87 197 aa9.51□□□□□ -0.89
VPS29-209ENST00000551655 H3BRN7 92 aa9.5□□□□□ -0.89
VPS29-209ENST00000551655 GAS8-AS1O95177 125 aa9.5□□□□□ -0.89
VPS29-209ENST00000551655 SRIP30626 198 aa9.5□□□□□ -0.89
VPS29-209ENST00000551655 RPL37AP61513 92 aaKnown RBP9.5□□□□□ -0.89
VPS29-209ENST00000551655 FHL2Q14192 279 aa9.5□□□□□ -0.89
VPS29-209ENST00000551655 CCDC71LQ8N9Z2 235 aa9.5□□□□□ -0.89
VPS29-209ENST00000551655 TMEM147Q9BVK8 224 aa9.5□□□□□ -0.89
VPS29-209ENST00000551655 SLC45A2Q9UMX9 530 aa9.5□□□□□ -0.89
VPS29-209ENST00000551655 SPINK4O60575 86 aa9.49□□□□□ -0.89
VPS29-209ENST00000551655 GYPEP15421 78 aa9.49□□□□□ -0.89
VPS29-209ENST00000551655 LRRC20Q8TCA0 184 aa9.49□□□□□ -0.89
VPS29-209ENST00000551655 MARCH1Q8TCQ1 289 aa9.49□□□□□ -0.89
VPS29-209ENST00000551655 KRTAP9-6A0A140TA67 174 aa9.48□□□□□ -0.89
VPS29-209ENST00000551655 IBA57-AS1B1ANH7 110 aa9.48□□□□□ -0.89
VPS29-209ENST00000551655 SULT1A3P0DMM9 295 aa9.48□□□□□ -0.89
VPS29-209ENST00000551655 SULT1A4P0DMN0 295 aa9.48□□□□□ -0.89
VPS29-209ENST00000551655 GGNBP1Q5YKI7 109 aa9.48□□□□□ -0.89
VPS29-209ENST00000551655 OR4D10Q8NGI6 311 aa9.48□□□□□ -0.89
VPS29-209ENST00000551655 ZNF431Q8TF32 576 aaPredicted RBP9.48□□□□□ -0.89
VPS29-209ENST00000551655 NRG4Q8WWG1 115 aa9.48□□□□□ -0.89
VPS29-209ENST00000551655 PYGO2Q9BRQ0 406 aa9.48□□□□□ -0.89
VPS29-209ENST00000551655 PAIP2BQ9ULR5 123 aaKnown RBP9.48□□□□□ -0.89
VPS29-209ENST00000551655 A0A087X0K7 114 aa9.47□□□□□ -0.89
VPS29-209ENST00000551655 TRAV5A0A0B4J249 113 aa9.47□□□□□ -0.89
VPS29-209ENST00000551655 TEX13DA0A0J9YY54 714 aaPredicted RBP9.47□□□□□ -0.89
VPS29-209ENST00000551655 CT45A10P0DMU9 189 aa9.47□□□□□ -0.89
VPS29-209ENST00000551655 TEPPQ6URK8 271 aa9.47□□□□□ -0.89
VPS29-209ENST00000551655 BPIFCQ8NFQ6 507 aa9.47□□□□□ -0.89
VPS29-209ENST00000551655 CNBD2Q96M20 576 aa9.47□□□□□ -0.89
VPS29-209ENST00000551655 SHANK2-AS3Q9BTD1 123 aa9.47□□□□□ -0.89
VPS29-209ENST00000551655 HSPB7Q9UBY9 170 aa9.47□□□□□ -0.89
VPS29-209ENST00000551655 IGHV3-38A0A0C4DH36 116 aa9.46□□□□□ -0.9
VPS29-209ENST00000551655 H3BTX0 84 aa9.46□□□□□ -0.9
VPS29-209ENST00000551655 CFDP00746 253 aaPredicted RBP9.46□□□□□ -0.9
VPS29-209ENST00000551655 IGHV3-30P01768 117 aa9.46□□□□□ -0.9
VPS29-209ENST00000551655 IGHV3-33P01772 117 aa9.46□□□□□ -0.9
VPS29-209ENST00000551655 CD3DP04234 171 aa9.46□□□□□ -0.9
VPS29-209ENST00000551655 SFTA3P0C7M3 94 aa9.46□□□□□ -0.9
VPS29-209ENST00000551655 IGHV3-30-3P0DP02 117 aa9.46□□□□□ -0.9
VPS29-209ENST00000551655 IGHV3-30-5P0DP03 117 aa9.46□□□□□ -0.9
VPS29-209ENST00000551655 RPL7P18124 248 aaKnown RBP9.46□□□□□ -0.9
VPS29-209ENST00000551655 SCGB2B2Q4G0G5 96 aa9.46□□□□□ -0.9
VPS29-209ENST00000551655 RNASE10Q5GAN6 216 aaKnown RBP9.46□□□□□ -0.9
VPS29-209ENST00000551655 NAA60Q9H7X0 242 aa9.46□□□□□ -0.9
VPS29-209ENST00000551655 TP53TG3Q9ULZ0 132 aa9.46□□□□□ -0.9
VPS29-209ENST00000551655 LOC100131303A0A0U1RQF7 123 aa9.45□□□□□ -0.9
VPS29-209ENST00000551655 IAPPP10997 89 aa9.45□□□□□ -0.9
VPS29-209ENST00000551655 TCL1AP56279 114 aa9.45□□□□□ -0.9
VPS29-209ENST00000551655 ZBTB8BQ8NAP8 495 aaPredicted RBP9.45□□□□□ -0.9
VPS29-209ENST00000551655 ZNF680Q8NEM1 530 aa9.45□□□□□ -0.9
VPS29-209ENST00000551655 ZFAND1Q8TCF1 268 aa9.45□□□□□ -0.9
VPS29-209ENST00000551655 VGLL1Q99990 258 aa9.45□□□□□ -0.9
VPS29-209ENST00000551655 RTBDNQ9BSG5 229 aaPredicted RBP9.45□□□□□ -0.9
VPS29-209ENST00000551655 MRPL32Q9BYC8 188 aaKnown RBP9.45□□□□□ -0.9
VPS29-209ENST00000551655 TRGV4A0A0C4DH28 118 aa9.44□□□□□ -0.9
VPS29-209ENST00000551655 PMS2P5A8MQ11 134 aa9.44□□□□□ -0.9
VPS29-209ENST00000551655 SLC17A3O00476 420 aa9.44□□□□□ -0.9
VPS29-209ENST00000551655 MRPS12O15235 138 aaKnown RBP9.44□□□□□ -0.9
VPS29-209ENST00000551655 TNFAIP8O95379 198 aa9.44□□□□□ -0.9
VPS29-209ENST00000551655 LINC01556Q5JQF7 62 aa9.44□□□□□ -0.9
VPS29-209ENST00000551655 STEAP1BQ6NZ63 245 aa9.44□□□□□ -0.9
VPS29-209ENST00000551655 OR1S1Q8NH92 325 aa9.44□□□□□ -0.9
VPS29-209ENST00000551655 BLNKQ8WV28 456 aa9.44□□□□□ -0.9
VPS29-209ENST00000551655 ZNF331Q9NQX6 463 aaPredicted RBP9.44□□□□□ -0.9
VPS29-209ENST00000551655 BLOC1S6Q9UL45 172 aa9.44□□□□□ -0.9
VPS29-209ENST00000551655 HIGD1AQ9Y241 93 aa9.44□□□□□ -0.9
VPS29-209ENST00000551655 B3GALNT1O75752 331 aa9.43□□□□□ -0.9
VPS29-209ENST00000551655 LEPP41159 167 aa9.43□□□□□ -0.9
VPS29-209ENST00000551655 CD300CQ08708 224 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 289.1 ms