RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 LGALS14Q8TCE9 139 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 CANT1Q8WVQ1 401 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 ARHGAP5-AS1Q96IT6 56 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 CIB1Q99828 191 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 ARPC5LQ9BPX5 153 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 LCE3DQ9BYE3 92 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 DPH3P1Q9H4G8 78 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 MRPL36Q9P0J6 103 aaKnown RBP1.38□□□□□ -2.19
PTCH1-223ENST00000551623 SPATA2Q9UM82 520 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 RPH3ALQ9UNE2 315 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 HHLA3Q9XRX5 114 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 FUT9Q9Y231 359 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 RBM7Q9Y580 266 aaKnown RBP1.38□□□□□ -2.19
PTCH1-223ENST00000551623 OR51B2Q9Y5P1 312 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 KIF25-AS1Q9Y6Z4 181 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 TRAV8-1A0A0A6YYK1 113 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 IGLV9-49A0A0B4J1Y8 123 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 TRAV8-2A0A0B4J237 113 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 A0A1W2PPK0 400 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 TCRBV3S1A0A5B6 114 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 SNURFLB1AK76 121 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 KLLNB2CW77 178 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 HMGB1P1B2RPK0 211 aaPredicted RBP1.37□□□□□ -2.19
PTCH1-223ENST00000551623 J3QRK9 145 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 GNGT2O14610 69 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 LECT2O14960 151 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 SNAPC5O75971 98 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 IGHV3-48P01763 117 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 IL4P05112 153 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 SLC25A4P12235 298 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 HIST1H1DP16402 221 aaKnown RBP1.37□□□□□ -2.19
PTCH1-223ENST00000551623 NFYAP23511 347 aaPredicted RBP1.37□□□□□ -2.19
PTCH1-223ENST00000551623 F2RP25116 425 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 SRIP30626 198 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 POLR2IP36954 125 aaKnown RBP1.37□□□□□ -2.19
PTCH1-223ENST00000551623 RANBP1P43487 201 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 TCL1AP56279 114 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 ARPC4P59998 168 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 ERVK-16P61578 105 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 HSPE1P61604 102 aaKnown RBP1.37□□□□□ -2.19
PTCH1-223ENST00000551623 RPL19P84098 196 aaKnown RBP1.37□□□□□ -2.19
PTCH1-223ENST00000551623 ST3GAL4Q11206 333 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 GAMTQ14353 236 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 ARL6IP1Q15041 203 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 RAB11BQ15907 218 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 PSG3Q16557 428 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 TPRXLQ17RH7 258 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 KRTAP19-2Q3LHN2 52 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 TIGITQ495A1 244 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 HSD17B12Q53GQ0 312 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 HES5Q5TA89 166 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 PRSS54Q6PEW0 395 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 CNIH2Q6PI25 160 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 Q6ZRP5 223 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 DEFB107AQ8IZN7 70 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 ZNF680Q8NEM1 530 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 OR51G1Q8NGK1 321 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 OR52I1Q8NGK6 324 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 OR4D5Q8NGN0 318 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 OR10G4Q8NGN3 311 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 RHOXF1Q8NHV9 184 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 SPACA4Q8TDM5 124 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 Q8WTZ3 238 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 BLNKQ8WV28 456 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 BORCS5Q969J3 196 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 TRIM63Q969Q1 353 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 TMEM230Q96A57 120 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 PINX1Q96BK5 328 aaKnown RBP1.37□□□□□ -2.19
PTCH1-223ENST00000551623 RAB3CQ96E17 227 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 SEC22AQ96IW7 307 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 GPR82Q96P67 336 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 ODF3Q96PU9 254 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 LINC01587Q99440 93 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 TXNDC17Q9BRA2 123 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 KCNK15Q9H427 330 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 Q9HAA7 133 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 CCL28Q9NRJ3 127 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 ANXA10Q9UJ72 324 aa1.37□□□□□ -2.19
PTCH1-223ENST00000551623 TRGV2A0A075B6R0 118 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 TRAV12-2A0A075B6T6 113 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 IGHV1OR15-1A0A075B7D0 117 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 FAM231BA6NCW3 169 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 TMEM235A6NFC5 223 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 G3V2T6 193 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 SULT1C2O00338 296 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 TAAR5O14804 337 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 PHOX2AO14813 284 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 PAGE4O60829 102 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 PRAF2O60831 178 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 FKBP6O75344 327 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 CCNKO75909 580 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 KRASP01116 189 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 PPYP01298 95 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 UCHL1P09936 223 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 RD3LP0DJH9 198 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 CXCL3P19876 107 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 GADD45AP24522 165 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 OR10J1P30954 320 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 OPRK1P41145 380 aa1.36□□□□□ -2.19
PTCH1-223ENST00000551623 ETV1P50549 477 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms