RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 SBSPONQ8IVN8 264 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 RNF182Q8N6D2 247 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 OR10G4Q8NGN3 311 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 OR10G9Q8NGN4 311 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 OR10G7Q8NGN6 311 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 HYLS1Q96M11 299 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 B9D2Q9BPU9 175 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 ZNF471Q9BX82 626 aaPredicted RBP13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 NBEAL2Q6ZNJ1 2754 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 COL7A1Q02388 2944 aa13.89□□□□□ -0.19
CTDSP2-207ENST00000551594 PRB4P10163 310 aaPredicted RBP13.88□□□□□ -0.19
CTDSP2-207ENST00000551594 HLA-DMBP28068 263 aa13.88□□□□□ -0.19
CTDSP2-207ENST00000551594 SERF2P84101 59 aa13.88□□□□□ -0.19
CTDSP2-207ENST00000551594 LRRC20Q8TCA0 184 aa13.88□□□□□ -0.19
CTDSP2-207ENST00000551594 ZNF586Q9NXT0 402 aa13.88□□□□□ -0.19
CTDSP2-207ENST00000551594 TMEM14CQ9P0S9 112 aa13.88□□□□□ -0.19
CTDSP2-207ENST00000551594 SLC17A3O00476 420 aa13.87□□□□□ -0.19
CTDSP2-207ENST00000551594 HAGHQ16775 308 aa13.87□□□□□ -0.19
CTDSP2-207ENST00000551594 ZFP69Q49AA0 526 aa13.87□□□□□ -0.19
CTDSP2-207ENST00000551594 ACTL10Q5JWF8 245 aa13.87□□□□□ -0.19
CTDSP2-207ENST00000551594 RPP25LQ8N5L8 163 aaKnown RBP13.87□□□□□ -0.19
CTDSP2-207ENST00000551594 HRH4Q9H3N8 390 aa13.87□□□□□ -0.19
CTDSP2-207ENST00000551594 LOC102724200A0A096LPH7 203 aaPredicted RBP13.86□□□□□ -0.19
CTDSP2-207ENST00000551594 A0A1W2PPV4 95 aa13.86□□□□□ -0.19
CTDSP2-207ENST00000551594 HMGB3O15347 200 aaKnown RBP13.86□□□□□ -0.19
CTDSP2-207ENST00000551594 OR10J4P0C629 311 aa13.86□□□□□ -0.19
CTDSP2-207ENST00000551594 SAMD13Q5VXD3 122 aa13.86□□□□□ -0.19
CTDSP2-207ENST00000551594 LCN15Q6UWW0 184 aa13.86□□□□□ -0.19
CTDSP2-207ENST00000551594 BLNKQ8WV28 456 aa13.86□□□□□ -0.19
CTDSP2-207ENST00000551594 ZNF503Q96F45 646 aa13.86□□□□□ -0.19
CTDSP2-207ENST00000551594 PAXXQ9BUH6 204 aa13.86□□□□□ -0.19
CTDSP2-207ENST00000551594 OR51M1Q9H341 326 aa13.86□□□□□ -0.19
CTDSP2-207ENST00000551594 RPRMQ9NS64 109 aa13.86□□□□□ -0.19
CTDSP2-207ENST00000551594 F6UB75 175 aa13.85□□□□□ -0.19
CTDSP2-207ENST00000551594 OR7C2O60412 319 aa13.85□□□□□ -0.19
CTDSP2-207ENST00000551594 MBP02144 154 aa13.85□□□□□ -0.19
CTDSP2-207ENST00000551594 HIST1H1EP10412 219 aaKnown RBP13.85□□□□□ -0.19
CTDSP2-207ENST00000551594 SPP1P10451 314 aa13.85□□□□□ -0.19
CTDSP2-207ENST00000551594 TMEM41BQ5BJD5 291 aa13.85□□□□□ -0.19
CTDSP2-207ENST00000551594 GDF5OSQ5U4N7 250 aa13.85□□□□□ -0.19
CTDSP2-207ENST00000551594 C9orf62Q8N4C0 152 aa13.85□□□□□ -0.19
CTDSP2-207ENST00000551594 FXYD5Q96DB9 178 aa13.85□□□□□ -0.19
CTDSP2-207ENST00000551594 SAT2Q96F10 170 aaPredicted RBP13.85□□□□□ -0.19
CTDSP2-207ENST00000551594 ZNF331Q9NQX6 463 aaPredicted RBP13.85□□□□□ -0.19
CTDSP2-207ENST00000551594 PLA2G2EQ9NZK7 142 aa13.85□□□□□ -0.19
CTDSP2-207ENST00000551594 CDC34P49427 236 aaPredicted RBP13.84□□□□□ -0.19
CTDSP2-207ENST00000551594 NKX2-5P52952 324 aaPredicted RBP13.84□□□□□ -0.19
CTDSP2-207ENST00000551594 SSX7Q7RTT5 188 aa13.84□□□□□ -0.19
CTDSP2-207ENST00000551594 STHQ8IWL8 128 aa13.84□□□□□ -0.19
CTDSP2-207ENST00000551594 RNF141Q8WVD5 230 aa13.84□□□□□ -0.19
CTDSP2-207ENST00000551594 HUWE1Q7Z6Z7 4374 aaKnown RBP13.84□□□□□ -0.19
CTDSP2-207ENST00000551594 TRBV19A0A075B6N1 114 aa13.83□□□□□ -0.2
CTDSP2-207ENST00000551594 NDUFB4O95168 129 aa13.83□□□□□ -0.2
CTDSP2-207ENST00000551594 NBEAP1P0C6P0 100 aa13.83□□□□□ -0.2
CTDSP2-207ENST00000551594 TAS2R45P59539 299 aa13.83□□□□□ -0.2
CTDSP2-207ENST00000551594 PSG3Q16557 428 aa13.83□□□□□ -0.2
CTDSP2-207ENST00000551594 GUK1Q16774 197 aa13.83□□□□□ -0.2
CTDSP2-207ENST00000551594 KHDC3LQ587J8 217 aa13.83□□□□□ -0.2
CTDSP2-207ENST00000551594 RAB24Q969Q5 203 aa13.83□□□□□ -0.2
CTDSP2-207ENST00000551594 SLC50A1Q9BRV3 221 aa13.83□□□□□ -0.2
CTDSP2-207ENST00000551594 TENM3Q9P273 2699 aa13.82□□□□□ -0.2
CTDSP2-207ENST00000551594 ZNF705FA8MVS1 300 aaPredicted RBP13.82□□□□□ -0.2
CTDSP2-207ENST00000551594 AKR1C8PQ5T2L2 129 aa13.82□□□□□ -0.2
CTDSP2-207ENST00000551594 TRPT1Q86TN4 253 aaKnown RBP13.82□□□□□ -0.2
CTDSP2-207ENST00000551594 BAP18Q8IXM2 172 aa13.82□□□□□ -0.2
CTDSP2-207ENST00000551594 ZNF738Q8NE65 137 aa13.82□□□□□ -0.2
CTDSP2-207ENST00000551594 ACTR3CQ9C0K3 210 aaPredicted RBP13.82□□□□□ -0.2
CTDSP2-207ENST00000551594 SAV1Q9H4B6 383 aaPredicted RBP13.82□□□□□ -0.2
CTDSP2-207ENST00000551594 H3BMM0 161 aa13.81□□□□□ -0.2
CTDSP2-207ENST00000551594 IGKV3-20P01619 116 aa13.81□□□□□ -0.2
CTDSP2-207ENST00000551594 ZNF705DP0CH99 300 aaPredicted RBP13.81□□□□□ -0.2
CTDSP2-207ENST00000551594 ZNF705BP0CI00 300 aaPredicted RBP13.81□□□□□ -0.2
CTDSP2-207ENST00000551594 TPT1P13693 172 aaKnown RBP13.81□□□□□ -0.2
CTDSP2-207ENST00000551594 UBE2L3P68036 154 aaKnown RBP13.81□□□□□ -0.2
CTDSP2-207ENST00000551594 ZNF726P1Q15940 193 aa13.81□□□□□ -0.2
CTDSP2-207ENST00000551594 FOXI2Q6ZQN5 318 aa13.81□□□□□ -0.2
CTDSP2-207ENST00000551594 A0A0J9YX75 114 aa13.8□□□□□ -0.2
CTDSP2-207ENST00000551594 STAG3L2P0CL84 134 aa13.8□□□□□ -0.2
CTDSP2-207ENST00000551594 STAG3L3P0CL85 134 aa13.8□□□□□ -0.2
CTDSP2-207ENST00000551594 ARL14EPLP0DKL9 152 aa13.8□□□□□ -0.2
CTDSP2-207ENST00000551594 HLA-DRB4P13762 266 aa13.8□□□□□ -0.2
CTDSP2-207ENST00000551594 EIF5AP63241 154 aaKnown RBP13.8□□□□□ -0.2
CTDSP2-207ENST00000551594 EXOC3-AS1Q8N2X6 119 aa13.8□□□□□ -0.2
CTDSP2-207ENST00000551594 STOML3Q8TAV4 291 aa13.8□□□□□ -0.2
CTDSP2-207ENST00000551594 PHYHIPLQ96FC7 376 aa13.8□□□□□ -0.2
CTDSP2-207ENST00000551594 RETNQ9HD89 108 aa13.8□□□□□ -0.2
CTDSP2-207ENST00000551594 HLA-DRB4X5D2U9 266 aa13.8□□□□□ -0.2
CTDSP2-207ENST00000551594 PRAC2D3DTV9 90 aa13.79□□□□□ -0.2
CTDSP2-207ENST00000551594 ZNF253O75346 499 aa13.79□□□□□ -0.2
CTDSP2-207ENST00000551594 SEC11BP0C7V7 166 aa13.79□□□□□ -0.2
CTDSP2-207ENST00000551594 FHITP49789 147 aa13.79□□□□□ -0.2
CTDSP2-207ENST00000551594 APOC4P55056 127 aa13.79□□□□□ -0.2
CTDSP2-207ENST00000551594 PDE6HQ13956 83 aa13.79□□□□□ -0.2
CTDSP2-207ENST00000551594 EBLN2Q6P2I7 272 aa13.79□□□□□ -0.2
CTDSP2-207ENST00000551594 PQLC2Q6ZP29 291 aa13.79□□□□□ -0.2
CTDSP2-207ENST00000551594 OR4B1Q8NGF8 309 aa13.79□□□□□ -0.2
CTDSP2-207ENST00000551594 TMED6Q8WW62 240 aa13.79□□□□□ -0.2
CTDSP2-207ENST00000551594 RPUSD4Q96CM3 377 aaKnown RBP13.79□□□□□ -0.2
CTDSP2-207ENST00000551594 TM2D3Q9BRN9 247 aa13.79□□□□□ -0.2
CTDSP2-207ENST00000551594 CSTL1Q9H114 145 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms