RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 Q8N1Y9 231 aa10.06□□□□□ -0.8
ERBB3-215ENST00000550828 FAM213BQ8TBF2 198 aa10.06□□□□□ -0.8
ERBB3-215ENST00000550828 SAT2Q96F10 170 aaPredicted RBP10.06□□□□□ -0.8
ERBB3-215ENST00000550828 C20orf173Q96LM9 149 aa10.06□□□□□ -0.8
ERBB3-215ENST00000550828 PAXXQ9BUH6 204 aa10.06□□□□□ -0.8
ERBB3-215ENST00000550828 ACTR3CQ9C0K3 210 aaPredicted RBP10.06□□□□□ -0.8
ERBB3-215ENST00000550828 OR7C2O60412 319 aa10.05□□□□□ -0.8
ERBB3-215ENST00000550828 CD5P06127 495 aa10.05□□□□□ -0.8
ERBB3-215ENST00000550828 ATF4P18848 351 aaPredicted RBP10.05□□□□□ -0.8
ERBB3-215ENST00000550828 FGF8P55075 233 aaPredicted RBP10.05□□□□□ -0.8
ERBB3-215ENST00000550828 DEFB1P60022 68 aa10.05□□□□□ -0.8
ERBB3-215ENST00000550828 KHDC3LQ587J8 217 aa10.05□□□□□ -0.8
ERBB3-215ENST00000550828 LCN15Q6UWW0 184 aa10.05□□□□□ -0.8
ERBB3-215ENST00000550828 OR51M1Q9H341 326 aa10.05□□□□□ -0.8
ERBB3-215ENST00000550828 HRH4Q9H3N8 390 aa10.05□□□□□ -0.8
ERBB3-215ENST00000550828 UBQLN2Q9UHD9 624 aa10.05□□□□□ -0.8
ERBB3-215ENST00000550828 TRBV19A0A075B6N1 114 aa10.04□□□□□ -0.8
ERBB3-215ENST00000550828 ZNF688P0C7X2 276 aa10.04□□□□□ -0.8
ERBB3-215ENST00000550828 PRB4P10163 310 aaPredicted RBP10.04□□□□□ -0.8
ERBB3-215ENST00000550828 HIST1H1EP10412 219 aaKnown RBP10.04□□□□□ -0.8
ERBB3-215ENST00000550828 GCHFRP30047 84 aa10.04□□□□□ -0.8
ERBB3-215ENST00000550828 TAS2R45P59539 299 aa10.04□□□□□ -0.8
ERBB3-215ENST00000550828 UBE2L3P68036 154 aaKnown RBP10.04□□□□□ -0.8
ERBB3-215ENST00000550828 ZNF124Q15973 351 aa10.04□□□□□ -0.8
ERBB3-215ENST00000550828 RNF182Q8N6D2 247 aa10.04□□□□□ -0.8
ERBB3-215ENST00000550828 SUN5Q8TC36 379 aa10.04□□□□□ -0.8
ERBB3-215ENST00000550828 RNF141Q8WVD5 230 aa10.04□□□□□ -0.8
ERBB3-215ENST00000550828 MBD3L1Q8WWY6 194 aa10.04□□□□□ -0.8
ERBB3-215ENST00000550828 PHYHIPLQ96FC7 376 aa10.04□□□□□ -0.8
ERBB3-215ENST00000550828 TMPRSS5Q9H3S3 457 aa10.04□□□□□ -0.8
ERBB3-215ENST00000550828 MAP6D1Q9H9H5 199 aa10.04□□□□□ -0.8
ERBB3-215ENST00000550828 MAP1LC3B2A6NCE7 125 aa10.03□□□□□ -0.8
ERBB3-215ENST00000550828 OR4C46A6NHA9 309 aa10.03□□□□□ -0.8
ERBB3-215ENST00000550828 DNASE2O00115 360 aaPredicted RBP10.03□□□□□ -0.8
ERBB3-215ENST00000550828 CD81P60033 236 aa10.03□□□□□ -0.8
ERBB3-215ENST00000550828 EIF5AL1Q6IS14 154 aaKnown RBP10.03□□□□□ -0.8
ERBB3-215ENST00000550828 DPPA3Q6W0C5 159 aa10.03□□□□□ -0.8
ERBB3-215ENST00000550828 PQLC2Q6ZP29 291 aa10.03□□□□□ -0.8
ERBB3-215ENST00000550828 BLNKQ8WV28 456 aa10.03□□□□□ -0.8
ERBB3-215ENST00000550828 CITED4Q96RK1 184 aa10.03□□□□□ -0.8
ERBB3-215ENST00000550828 MAP1LC3BQ9GZQ8 125 aa10.03□□□□□ -0.8
ERBB3-215ENST00000550828 ZNF331Q9NQX6 463 aaPredicted RBP10.03□□□□□ -0.8
ERBB3-215ENST00000550828 AURKAIP1Q9NWT8 199 aaPredicted RBP10.03□□□□□ -0.8
ERBB3-215ENST00000550828 RNF24Q9Y225 148 aa10.03□□□□□ -0.8
ERBB3-215ENST00000550828 NBEAP1P0C6P0 100 aa10.02□□□□□ -0.81
ERBB3-215ENST00000550828 PSMB3P49720 205 aa10.02□□□□□ -0.81
ERBB3-215ENST00000550828 MEOX2P50222 304 aa10.02□□□□□ -0.81
ERBB3-215ENST00000550828 PAFAH1B2P68402 229 aa10.02□□□□□ -0.81
ERBB3-215ENST00000550828 IFITM2Q01629 132 aa10.02□□□□□ -0.81
ERBB3-215ENST00000550828 TEX261Q6UWH6 196 aa10.02□□□□□ -0.81
ERBB3-215ENST00000550828 ZNF680Q8NEM1 530 aa10.02□□□□□ -0.81
ERBB3-215ENST00000550828 A0A1B0GV50 99 aa10.01□□□□□ -0.81
ERBB3-215ENST00000550828 K7EIL1 84 aa10.01□□□□□ -0.81
ERBB3-215ENST00000550828 ISLRO14498 428 aa10.01□□□□□ -0.81
ERBB3-215ENST00000550828 ZNF253O75346 499 aa10.01□□□□□ -0.81
ERBB3-215ENST00000550828 CXorf1O96002 111 aa10.01□□□□□ -0.81
ERBB3-215ENST00000550828 RAB5CP51148 216 aa10.01□□□□□ -0.81
ERBB3-215ENST00000550828 DEFB131AP59861 70 aa10.01□□□□□ -0.81
ERBB3-215ENST00000550828 CCL20P78556 96 aa10.01□□□□□ -0.81
ERBB3-215ENST00000550828 APRG1Q8IVJ8 170 aa10.01□□□□□ -0.81
ERBB3-215ENST00000550828 EXOC3-AS1Q8N2X6 119 aa10.01□□□□□ -0.81
ERBB3-215ENST00000550828 C16orf92Q96LL3 132 aa10.01□□□□□ -0.81
ERBB3-215ENST00000550828 PRKDCP78527 4128 aaKnown RBP10.01□□□□□ -0.81
ERBB3-215ENST00000550828 M0R3E3 92 aa10□□□□□ -0.81
ERBB3-215ENST00000550828 PDE6HQ13956 83 aa10□□□□□ -0.81
ERBB3-215ENST00000550828 GUK1Q16774 197 aa10□□□□□ -0.81
ERBB3-215ENST00000550828 PSMG4Q5JS54 123 aa10□□□□□ -0.81
ERBB3-215ENST00000550828 GDF5OSQ5U4N7 250 aa10□□□□□ -0.81
ERBB3-215ENST00000550828 DEFB125Q8N687 156 aa10□□□□□ -0.81
ERBB3-215ENST00000550828 SFT2D1Q8WV19 159 aa10□□□□□ -0.81
ERBB3-215ENST00000550828 PCNPQ8WW12 178 aaKnown RBP10□□□□□ -0.81
ERBB3-215ENST00000550828 SLC50A1Q9BRV3 221 aa10□□□□□ -0.81
ERBB3-215ENST00000550828 YTHDF2Q9Y5A9 579 aaKnown RBP10□□□□□ -0.81
ERBB3-215ENST00000550828 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
ERBB3-215ENST00000550828 KNCNA6PVL3 124 aa9.99□□□□□ -0.81
ERBB3-215ENST00000550828 ZNF705FA8MVS1 300 aaPredicted RBP9.99□□□□□ -0.81
ERBB3-215ENST00000550828 ZNF705EA8MWA4 302 aaPredicted RBP9.99□□□□□ -0.81
ERBB3-215ENST00000550828 PRAC2D3DTV9 90 aa9.99□□□□□ -0.81
ERBB3-215ENST00000550828 F6UB75 175 aa9.99□□□□□ -0.81
ERBB3-215ENST00000550828 H2AFB1P0C5Y9 115 aa9.99□□□□□ -0.81
ERBB3-215ENST00000550828 PSG3Q16557 428 aa9.99□□□□□ -0.81
ERBB3-215ENST00000550828 GTSCR1Q86UQ5 136 aa9.99□□□□□ -0.81
ERBB3-215ENST00000550828 IQCF2Q8IXL9 164 aa9.99□□□□□ -0.81
ERBB3-215ENST00000550828 LINC00052Q96N35 136 aa9.99□□□□□ -0.81
ERBB3-215ENST00000550828 FAM110AQ9BQ89 295 aa9.99□□□□□ -0.81
ERBB3-215ENST00000550828 OR11H12B2RN74 326 aa9.98□□□□□ -0.81
ERBB3-215ENST00000550828 GGTLC3B5MD39 225 aa9.98□□□□□ -0.81
ERBB3-215ENST00000550828 RANP62826 216 aaKnown RBP9.98□□□□□ -0.81
ERBB3-215ENST00000550828 ICAM4Q14773 271 aa9.98□□□□□ -0.81
ERBB3-215ENST00000550828 Q9H3A6 140 aa9.98□□□□□ -0.81
ERBB3-215ENST00000550828 TMEM167BQ9NRX6 74 aa9.98□□□□□ -0.81
ERBB3-215ENST00000550828 RBMY1BA6NDE4 496 aaKnown RBP9.97□□□□□ -0.81
ERBB3-215ENST00000550828 RBMY1EA6NEQ0 496 aaKnown RBP9.97□□□□□ -0.81
ERBB3-215ENST00000550828 RBMY1DP0C7P1 496 aaKnown RBP9.97□□□□□ -0.81
ERBB3-215ENST00000550828 ZNF705DP0CH99 300 aaPredicted RBP9.97□□□□□ -0.81
ERBB3-215ENST00000550828 ZNF705BP0CI00 300 aaPredicted RBP9.97□□□□□ -0.81
ERBB3-215ENST00000550828 ID1P41134 155 aa9.97□□□□□ -0.81
ERBB3-215ENST00000550828 UBE2G2P60604 165 aa9.97□□□□□ -0.81
ERBB3-215ENST00000550828 SNRPD3P62318 126 aaKnown RBP9.97□□□□□ -0.81
ERBB3-215ENST00000550828 SAMD13Q5VXD3 122 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms