RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 SHANK2-AS3Q9BTD1 123 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 GGACTQ9BVM4 153 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 NRN1Q9NPD7 142 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 UQCC1Q9NVA1 299 aa8.22□□□□□ -1.09
RAB5B-208ENST00000550283 TRAV8-2A0A0B4J237 113 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 TRAV5A0A0B4J249 113 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 HELTA6NFD8 242 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 F6UB75 175 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 FABP1P07148 127 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 OR5G3P0C626 314 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 PXDC1Q5TGL8 231 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 Q6ZRG5 221 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 TRPT1Q86TN4 253 aaKnown RBP8.21□□□□□ -1.1
RAB5B-208ENST00000550283 HSD17B11Q8NBQ5 300 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 OR5C1Q8NGR4 320 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 NARS2Q96I59 477 aaKnown RBP8.21□□□□□ -1.1
RAB5B-208ENST00000550283 WWC2-AS2Q96NR7 200 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 ATP5SQ99766 215 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 RSG1Q9BU20 258 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 TMEM147Q9BVK8 224 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 ZMAT4Q9H898 229 aa8.21□□□□□ -1.1
RAB5B-208ENST00000550283 H3BTX0 84 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 HYPMO75409 117 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 IFNA5P01569 189 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 CD5P06127 495 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 SPP1P10451 314 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 FGF7P21781 194 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 CAMLGP49069 296 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 RAB5CP51148 216 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 ACTL10Q5JWF8 245 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 C1orf194Q5T5A4 169 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 OR8I2Q8N0Y5 310 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 RNF182Q8N6D2 247 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 HRH4Q9H3N8 390 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 HIGD1AQ9Y241 93 aa8.2□□□□□ -1.1
RAB5B-208ENST00000550283 EIF3GO75821 320 aaKnown RBP eCLIP8.19□□□□□ -1.1
RAB5B-208ENST00000550283 SELENOTP62341 195 aa8.19□□□□□ -1.1
RAB5B-208ENST00000550283 HBG1P69891 147 aa8.19□□□□□ -1.1
RAB5B-208ENST00000550283 HBG2P69892 147 aa8.19□□□□□ -1.1
RAB5B-208ENST00000550283 SPATA31B1PQ5VZV4 182 aa8.19□□□□□ -1.1
RAB5B-208ENST00000550283 LINC00528Q8N1L1 170 aa8.19□□□□□ -1.1
RAB5B-208ENST00000550283 GNPNAT1Q96EK6 184 aaPredicted RBP8.19□□□□□ -1.1
RAB5B-208ENST00000550283 SH3BGRL3Q9H299 93 aa8.19□□□□□ -1.1
RAB5B-208ENST00000550283 TREM1Q9NP99 234 aa8.19□□□□□ -1.1
RAB5B-208ENST00000550283 H3BMM0 161 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 H3BQ15 152 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 SLC17A3O00476 420 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 IGKV3-20P01619 116 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 ZNF705DP0CH99 300 aaPredicted RBP8.18□□□□□ -1.1
RAB5B-208ENST00000550283 ZNF705BP0CI00 300 aaPredicted RBP8.18□□□□□ -1.1
RAB5B-208ENST00000550283 ATP6V0CP27449 155 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 LINC00305Q7Z4B0 112 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 OR2G3Q8NGZ4 309 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 SCGB1C1Q8TD33 95 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 RNF183Q96D59 192 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 NPCDR1Q9BY65 106 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 CSTL1Q9H114 145 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 SLC39A9Q9NUM3 307 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 CLEC5AQ9NY25 188 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 PXMP4Q9Y6I8 212 aa8.18□□□□□ -1.1
RAB5B-208ENST00000550283 KIR2DL5BA0A0G2JN68 375 aa8.17□□□□□ -1.1
RAB5B-208ENST00000550283 KIR2DL5BA0A0G2JPC4 375 aa8.17□□□□□ -1.1
RAB5B-208ENST00000550283 UMAD1C9J7I0 102 aa8.17□□□□□ -1.1
RAB5B-208ENST00000550283 SPRY2O43597 315 aa8.17□□□□□ -1.1
RAB5B-208ENST00000550283 CA1P00915 261 aaPredicted RBP8.17□□□□□ -1.1
RAB5B-208ENST00000550283 RPL29P47914 159 aaKnown RBP8.17□□□□□ -1.1
RAB5B-208ENST00000550283 APOC4P55056 127 aa8.17□□□□□ -1.1
RAB5B-208ENST00000550283 FXYD7P58549 80 aa8.17□□□□□ -1.1
RAB5B-208ENST00000550283 KIR2DL5AQ8N109 375 aa8.17□□□□□ -1.1
RAB5B-208ENST00000550283 KIR2DL5BQ8NHK3 375 aa8.17□□□□□ -1.1
RAB5B-208ENST00000550283 FAM213BQ8TBF2 198 aa8.17□□□□□ -1.1
RAB5B-208ENST00000550283 WDR61Q9GZS3 305 aaKnown RBP8.17□□□□□ -1.1
RAB5B-208ENST00000550283 DYNC2H1Q8NCM8 4307 aaKnown RBP8.16□□□□□ -1.1
RAB5B-208ENST00000550283 A0A0J9YWU9 116 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 TMEM218A2RU14 115 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 COX7A2P2O60397 106 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 SCO1O75880 301 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 APOC3P02656 99 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 GALR1P47211 349 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 PSMB3P49720 205 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 CMC4P56277 68 aaPredicted RBP8.16□□□□□ -1.1
RAB5B-208ENST00000550283 B2MP61769 119 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 ATP6V1FQ16864 119 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 AKR1C8PQ5T2L2 129 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 C10orf113Q5VZT2 155 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 ZFAND6Q6FIF0 208 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 Q6ZWC4 215 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 STHQ8IWL8 128 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 CSNK1G2-AS1Q8NCQ2 148 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 SLC35B3Q9H1N7 401 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 DNAJC4Q9NNZ3 241 aa8.16□□□□□ -1.1
RAB5B-208ENST00000550283 A0A0J9YX75 114 aa8.15□□□□□ -1.1
RAB5B-208ENST00000550283 PRAC2D3DTV9 90 aa8.15□□□□□ -1.1
RAB5B-208ENST00000550283 ISLRO14498 428 aa8.15□□□□□ -1.1
RAB5B-208ENST00000550283 DEFB4AO15263 64 aa8.15□□□□□ -1.1
RAB5B-208ENST00000550283 IGLC2P0DOY2 106 aa8.15□□□□□ -1.1
RAB5B-208ENST00000550283 HLA-DRB4P13762 266 aa8.15□□□□□ -1.1
RAB5B-208ENST00000550283 DPPA3Q6W0C5 159 aa8.15□□□□□ -1.1
RAB5B-208ENST00000550283 MIR17HGQ75NE6 70 aa8.15□□□□□ -1.1
RAB5B-208ENST00000550283 ZNF709Q8N972 641 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms