RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 RAB19A4D1S5 217 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 MAP1LC3B2A6NCE7 125 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 H3BQ15 152 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 MRPS12O15235 138 aaKnown RBP6.75□□□□□ -1.33
CACNB3-215ENST00000550190 CXorf1O96002 111 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 H2AFB1P0C5Y9 115 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 NBEAP1P0C6P0 100 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 HIST1H1EP10412 219 aaKnown RBP6.75□□□□□ -1.33
CACNB3-215ENST00000550190 UBE2L3P68036 154 aaKnown RBP6.75□□□□□ -1.33
CACNB3-215ENST00000550190 IGFL4Q6B9Z1 124 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 PQLC2Q6ZP29 291 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 SFT2D1Q8WV19 159 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 ZNF503Q96F45 646 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 LINC00052Q96N35 136 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 PRR25Q96S07 402 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 SPAG8Q99932 426 aaPredicted RBP6.75□□□□□ -1.33
CACNB3-215ENST00000550190 MAP1LC3BQ9GZQ8 125 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 TMPRSS5Q9H3S3 457 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 ZNF586Q9NXT0 402 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 TMEM14CQ9P0S9 112 aa6.75□□□□□ -1.33
CACNB3-215ENST00000550190 ZMAT5Q9UDW3 170 aaKnown RBP6.75□□□□□ -1.33
CACNB3-215ENST00000550190 ZNF256Q9Y2P7 627 aaPredicted RBP6.75□□□□□ -1.33
CACNB3-215ENST00000550190 A0A087X0K7 114 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 K7EQG2 157 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 WIPF1O43516 503 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 ATP6V1G1O75348 118 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 ZNF688P0C7X2 276 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 IGLC2P0DOY2 106 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 GCHFRP30047 84 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 ID1P41134 155 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 MEOX2P50222 304 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 KRTAP10-11P60412 298 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 CCL20P78556 96 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 GTSCR1Q86UQ5 136 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 COMMD7Q86VX2 200 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 FAM24BQ8N5W8 94 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 SUN5Q8TC36 379 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 FXYD5Q96DB9 178 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 HRH4Q9H3N8 390 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 SORL1Q92673 2214 aa6.74□□□□□ -1.33
CACNB3-215ENST00000550190 TEX46H3BTG2 121 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 SLC17A3O00476 420 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 HBE1P02100 147 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 CD7P09564 240 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 PRB4P10163 310 aaPredicted RBP6.73□□□□□ -1.33
CACNB3-215ENST00000550190 HLA-DMBP28068 263 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 DEFB131AP59861 70 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 CD81P60033 236 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 RANP62826 216 aaKnown RBP6.73□□□□□ -1.33
CACNB3-215ENST00000550190 GUK1Q16774 197 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 BEAN1Q3B7T3 259 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 PSMG4Q5JS54 123 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 RNF182Q8N6D2 247 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 DCANP1Q8TF63 244 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 FAM210AQ96ND0 272 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 SLC50A1Q9BRV3 221 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 TMEM167BQ9NRX6 74 aa6.73□□□□□ -1.33
CACNB3-215ENST00000550190 NOTCH3Q9UM47 2321 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 TRBV19A0A075B6N1 114 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 TRAV2A0A0B4J234 112 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 TRAV8-2A0A0B4J237 113 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 OR11H12B2RN74 326 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 SOCS3O14543 225 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 NDUFS6O75380 124 aaKnown RBP6.72□□□□□ -1.33
CACNB3-215ENST00000550190 PRB2P02812 416 aaPredicted RBP6.72□□□□□ -1.33
CACNB3-215ENST00000550190 CMC4P56277 68 aaPredicted RBP6.72□□□□□ -1.33
CACNB3-215ENST00000550190 UBE2G2P60604 165 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 SNRPD3P62318 126 aaKnown RBP6.72□□□□□ -1.33
CACNB3-215ENST00000550190 SRSF3P84103 164 aaKnown RBP6.72□□□□□ -1.33
CACNB3-215ENST00000550190 PSG9Q00887 426 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 EGFEM1PQ0D2K5 195 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 ICAM4Q14773 271 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 UQCC3Q6UW78 93 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 EXOC3-AS1Q8N2X6 119 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 AAMDCQ9H7C9 122 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 MAP6D1Q9H9H5 199 aa6.72□□□□□ -1.33
CACNB3-215ENST00000550190 ZNF331Q9NQX6 463 aaPredicted RBP6.72□□□□□ -1.33
CACNB3-215ENST00000550190 PGPA6NDG6 321 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 ISLRO14498 428 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 NDUFB4O95168 129 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 PSMB3P49720 205 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 ZNF124Q15973 351 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 PSG3Q16557 428 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 ZNF506Q5JVG8 444 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 SAMD13Q5VXD3 122 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 APRG1Q8IVJ8 170 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 ZNF738Q8NE65 137 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 C20orf173Q96LM9 149 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 WFDC10AQ9H1F0 79 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 Q9H3A6 140 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 SMDT1Q9H4I9 107 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 RPH3ALQ9UNE2 315 aa6.71□□□□□ -1.34
CACNB3-215ENST00000550190 LOC102723971A0A1B0GUV8 181 aa6.7□□□□□ -1.34
CACNB3-215ENST00000550190 KNCNA6PVL3 124 aa6.7□□□□□ -1.34
CACNB3-215ENST00000550190 ZNF705FA8MVS1 300 aaPredicted RBP6.7□□□□□ -1.34
CACNB3-215ENST00000550190 C9JQL5 133 aa6.7□□□□□ -1.34
CACNB3-215ENST00000550190 ZNF253O75346 499 aa6.7□□□□□ -1.34
CACNB3-215ENST00000550190 SLC25A5P05141 298 aaKnown RBP6.7□□□□□ -1.34
CACNB3-215ENST00000550190 DEFB1P60022 68 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms