RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 C9orf135Q5VTT2 229 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 RPL7L1Q6DKI1 246 aaKnown RBP3.63□□□□□ -1.83
SCAF11-212ENST00000549162 FAAP20Q6NZ36 180 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 Q75L30 129 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 MUC7Q8TAX7 377 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 PGLYRP4Q96LB8 373 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 RASL11BQ9BPW5 248 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 CACNA1CQ13936 2221 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 FXYD3Q14802 87 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 PAPPA-AS1Q5QFB9 102 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 SYT8Q8NBV8 401 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 CCL17Q92583 94 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 SFRP2Q96HF1 295 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 GNB1LQ9BYB4 327 aa3.63□□□□□ -1.83
SCAF11-212ENST00000549162 CSDC2Q9Y534 153 aaKnown RBP3.63□□□□□ -1.83
SCAF11-212ENST00000549162 OR10J1P30954 320 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 MEF2BQ02080 365 aaPredicted RBP3.62□□□□□ -1.83
SCAF11-212ENST00000549162 DIAPH2-AS1Q14236 149 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 FAM201AQ5SY85 155 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 C1orf196B1AJZ1 125 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 DUSP14O95147 198 aaKnown RBP3.62□□□□□ -1.83
SCAF11-212ENST00000549162 CRYZL1O95825 349 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 PI3P19957 117 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 MRPL23Q16540 153 aaKnown RBP3.62□□□□□ -1.83
SCAF11-212ENST00000549162 PSG3Q16557 428 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 C6orf226Q5I0X4 101 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 DNAJC30Q96LL9 226 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 NDFIP1Q9BT67 221 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 RPRMQ9NS64 109 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 CFAP54Q96N23 3096 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 CCL25O15444 150 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 NDUFS7O75251 213 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 LORP23490 312 aaPredicted RBP3.62□□□□□ -1.83
SCAF11-212ENST00000549162 LEPP41159 167 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 ATP5G2Q06055 141 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 Q86TA4 180 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 V9GYV3 84 aa3.62□□□□□ -1.83
SCAF11-212ENST00000549162 ZFHX3Q15911 3703 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 NPPCP23582 126 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 CDC34P49427 236 aaPredicted RBP3.61□□□□□ -1.83
SCAF11-212ENST00000549162 OR10J3Q5JRS4 329 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 NIT1Q86X76 327 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 C22orf15Q8WYQ4 148 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 METTL26Q96S19 204 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 GTSF1LQ9H1H1 148 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 DAZ1Q9NQZ3 744 aaKnown RBP3.61□□□□□ -1.83
SCAF11-212ENST00000549162 TRRAPQ9Y4A5 3859 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 IZUMO1RA6ND01 250 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 F2Z2F3 143 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 HYPMO75409 117 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 KRTAP10-3P60369 221 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 ACTL10Q5JWF8 245 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 GBGT1Q8N5D6 347 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 MRPL36Q9P0J6 103 aaKnown RBP3.61□□□□□ -1.83
SCAF11-212ENST00000549162 HIGD1AQ9Y241 93 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 TMEM189A5PLL7 270 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 FAM24AA6NFZ4 105 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 RBMXL2O75526 392 aaKnown RBP3.61□□□□□ -1.83
SCAF11-212ENST00000549162 SCGB2B2Q4G0G5 96 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 OTPQ5XKR4 325 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 CIARTQ8N365 385 aaPredicted RBP3.61□□□□□ -1.83
SCAF11-212ENST00000549162 PDCD10Q9BUL8 212 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 HINT2Q9BX68 163 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 EPDR1Q9UM22 224 aa3.61□□□□□ -1.83
SCAF11-212ENST00000549162 LOC107984156A0A0G2JMH3 177 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 TPPP2P59282 170 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 LINC01551Q86U37 167 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 ARL17AQ8IVW1 177 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 LINC01006Q8NI28 216 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 NARS2Q96I59 477 aaKnown RBP3.6□□□□□ -1.83
SCAF11-212ENST00000549162 GSKIPQ9P0R6 139 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 FCN1O00602 326 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 SSSCA1O60232 199 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 LY6G6DO95868 133 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 ODF4Q2M2E3 257 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 C19orf35Q6ZS72 473 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 AMN1Q8IY45 258 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 CYB561D1Q8N8Q1 229 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 ACY3Q96HD9 319 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 SGK494Q96LW2 274 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 CHCHD7Q9BUK0 85 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 BEX1Q9HBH7 125 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 RABAC1Q9UI14 185 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 PAIP2BQ9ULR5 123 aaKnown RBP3.6□□□□□ -1.83
SCAF11-212ENST00000549162 COLCA2A8K830 154 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 TCF21O43680 179 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 TCRAP04437 139 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 FAM162BQ5T6X4 162 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 ATRAIDQ6UW56 229 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 ZFAND2AQ8N6M9 145 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 CASTOR1Q8WTX7 329 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 UHRF2Q96PU4 802 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 C20orf24Q9BUV8 137 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 FBN2P35556 2912 aa3.6□□□□□ -1.83
SCAF11-212ENST00000549162 IGLV2-18A0A075B6J9 118 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 A0A0J9YX75 114 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 A6NIN4 97 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 SNAPINO95295 136 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 TCL1AP56279 114 aa3.59□□□□□ -1.83
SCAF11-212ENST00000549162 DEFB114Q30KQ6 69 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms