RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 AP5S1Q9NUS5 200 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 HSPB8Q9UJY1 196 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 RALYQ9UKM9 306 aaKnown RBP11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 PSG8Q9UQ74 426 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 LOC389332A0A1B0GUA5 103 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 TCTAP57738 103 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 LOXL1Q08397 574 aaPredicted RBP11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 LDLRAD2Q5SZI1 272 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 SIGLEC15Q6ZMC9 328 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 RNF24Q9Y225 148 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 K7EIM0 57 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 IL4P05112 153 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 FXYD7P58549 80 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 BPIFA4PQ86YQ2 179 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 SHANK2-AS3Q9BTD1 123 aa11.16□□□□□ -0.62
RAPGEF3-218ENST00000548919 K7EP13 123 aa11.15□□□□□ -0.62
RAPGEF3-218ENST00000548919 HLA-DRB1P01911 266 aa11.15□□□□□ -0.62
RAPGEF3-218ENST00000548919 IFI27P40305 119 aaPredicted RBP11.15□□□□□ -0.62
RAPGEF3-218ENST00000548919 ARF6P62330 175 aa11.15□□□□□ -0.62
RAPGEF3-218ENST00000548919 RIGQ13278 110 aa11.15□□□□□ -0.62
RAPGEF3-218ENST00000548919 PRSS3P2Q8NHM4 247 aa11.15□□□□□ -0.62
RAPGEF3-218ENST00000548919 SCNM1Q9BWG6 230 aa11.15□□□□□ -0.62
RAPGEF3-218ENST00000548919 ABCA4P78363 2273 aa11.15□□□□□ -0.62
RAPGEF3-218ENST00000548919 SERTM2A0A1B0GWG4 89 aa11.15□□□□□ -0.63
RAPGEF3-218ENST00000548919 FCGR2BP31994 310 aaPredicted RBP11.15□□□□□ -0.63
RAPGEF3-218ENST00000548919 RNF151Q2KHN1 245 aa11.15□□□□□ -0.63
RAPGEF3-218ENST00000548919 LINC01545Q5VT33 79 aa11.15□□□□□ -0.63
RAPGEF3-218ENST00000548919 TMEM75Q8N9X5 138 aa11.15□□□□□ -0.63
RAPGEF3-218ENST00000548919 ZNF747Q9BV97 191 aa11.15□□□□□ -0.63
RAPGEF3-218ENST00000548919 PAX2Q02962 417 aa11.14□□□□□ -0.63
RAPGEF3-218ENST00000548919 PSG3Q16557 428 aa11.14□□□□□ -0.63
RAPGEF3-218ENST00000548919 IGF2-ASQ6U949 168 aa11.14□□□□□ -0.63
RAPGEF3-218ENST00000548919 FA2HQ7L5A8 372 aa11.14□□□□□ -0.63
RAPGEF3-218ENST00000548919 DEFB125Q8N687 156 aa11.14□□□□□ -0.63
RAPGEF3-218ENST00000548919 ZNF491Q8N8L2 437 aa11.14□□□□□ -0.63
RAPGEF3-218ENST00000548919 TMEM213A2RRL7 107 aa11.14□□□□□ -0.63
RAPGEF3-218ENST00000548919 H3BRN7 92 aa11.14□□□□□ -0.63
RAPGEF3-218ENST00000548919 TIMM23O14925 209 aa11.14□□□□□ -0.63
RAPGEF3-218ENST00000548919 AMMECR1LQ6DCA0 310 aa11.14□□□□□ -0.63
RAPGEF3-218ENST00000548919 TRAV30A0A087WSZ9 112 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 PPIAL4CA0A0B4J2A2 164 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 VSTM5A8MXK1 200 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 PPIAL4GP0DN37 164 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 GFRALQ6UXV0 394 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 OR8A1Q8NGG7 326 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 TNFRSF14Q92956 283 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 RNF125Q96EQ8 232 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 ABHD17AQ96GS6 310 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 D6R8Y8 96 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 PRR30Q53SZ7 412 aaPredicted RBP11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 C12orf54Q6X4T0 127 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 ZNF414Q96IQ9 312 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 HILPDAQ9Y5L2 63 aa11.13□□□□□ -0.63
RAPGEF3-218ENST00000548919 JKAMPQ9P055 326 aa11.12□□□□□ -0.63
RAPGEF3-218ENST00000548919 ONECUT1Q9UBC0 465 aa11.12□□□□□ -0.63
RAPGEF3-218ENST00000548919 A0A096LNJ9 63 aa11.12□□□□□ -0.63
RAPGEF3-218ENST00000548919 K7EQM0 130 aa11.12□□□□□ -0.63
RAPGEF3-218ENST00000548919 GPR183P32249 361 aa11.12□□□□□ -0.63
RAPGEF3-218ENST00000548919 LYZL1Q6UWQ5 148 aa11.12□□□□□ -0.63
RAPGEF3-218ENST00000548919 C2orf91Q6ZV80 131 aa11.12□□□□□ -0.63
RAPGEF3-218ENST00000548919 AMN1Q8IY45 258 aa11.12□□□□□ -0.63
RAPGEF3-218ENST00000548919 MRPS12O15235 138 aaKnown RBP11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 PIP4P2Q8N4L2 257 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 OR10AG1Q8NH19 301 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 MS4A6AQ9H2W1 248 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 TLN1Q9Y490 2541 aaKnown RBP11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 TRBV6-1A0A0K0K1D8 114 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 HIST1H1AQ02539 215 aaPredicted RBP11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 SIGLEC8Q9NYZ4 499 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 CEP295Q9C0D2 2601 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 LY6HO94772 140 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 IGHV3-23P01764 117 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 COX8AP10176 69 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 CSN1S1P47710 185 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 RHOGP84095 191 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 PSG9Q00887 426 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 Q8NA96 180 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 SELENOKQ9Y6D0 94 aa11.11□□□□□ -0.63
RAPGEF3-218ENST00000548919 IGKV2-40A0A087WW87 121 aaPredicted RBP11.1□□□□□ -0.63
RAPGEF3-218ENST00000548919 TRAV8-6A0A0B4J262 113 aa11.1□□□□□ -0.63
RAPGEF3-218ENST00000548919 LY6LH3BQJ8 138 aa11.1□□□□□ -0.63
RAPGEF3-218ENST00000548919 IGKV2D-40P01614 121 aaPredicted RBP11.1□□□□□ -0.63
RAPGEF3-218ENST00000548919 ANKRD39Q53RE8 183 aa11.1□□□□□ -0.63
RAPGEF3-218ENST00000548919 HRNRQ86YZ3 2850 aaPredicted RBP11.1□□□□□ -0.63
RAPGEF3-218ENST00000548919 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
RAPGEF3-218ENST00000548919 CT45A10P0DMU9 189 aa11.1□□□□□ -0.63
RAPGEF3-218ENST00000548919 APOBEC3AP31941 199 aaPredicted RBP11.1□□□□□ -0.63
RAPGEF3-218ENST00000548919 UQCRFS1P47985 274 aa11.1□□□□□ -0.63
RAPGEF3-218ENST00000548919 IGFL4Q6B9Z1 124 aa11.1□□□□□ -0.63
RAPGEF3-218ENST00000548919 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.09□□□□□ -0.63
RAPGEF3-218ENST00000548919 CDKN1BP46527 198 aa11.09□□□□□ -0.63
RAPGEF3-218ENST00000548919 GNG7O60262 68 aa11.09□□□□□ -0.63
RAPGEF3-218ENST00000548919 SH2D1AO60880 128 aa11.09□□□□□ -0.63
RAPGEF3-218ENST00000548919 KLRD1Q13241 179 aa11.09□□□□□ -0.63
RAPGEF3-218ENST00000548919 GATD1Q8NB37 220 aa11.09□□□□□ -0.63
RAPGEF3-218ENST00000548919 PRELID3AQ96N28 172 aa11.09□□□□□ -0.63
RAPGEF3-218ENST00000548919 IGHV3OR16-8A0A075B7F1 116 aa11.08□□□□□ -0.64
RAPGEF3-218ENST00000548919 TMEM189A5PLL7 270 aa11.08□□□□□ -0.64
RAPGEF3-218ENST00000548919 Q8TAT8 98 aa11.08□□□□□ -0.64
RAPGEF3-218ENST00000548919 LINC01560Q8TB33 94 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms