RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SPANXB1Q9NS25 103 aaPredicted RBP2.17□□□□□ -2.06
PTCH1-216ENST00000548379 IDI2-AS1Q9NZ38 188 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 OR52A1Q9UKL2 312 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 SAMHD1Q9Y3Z3 626 aaKnown RBP2.17□□□□□ -2.06
PTCH1-216ENST00000548379 R4GMQ9 66 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 V9GYS6 101 aa2.17□□□□□ -2.06
PTCH1-216ENST00000548379 KMT2CQ8NEZ4 4911 aaKnown RBP2.17□□□□□ -2.06
PTCH1-216ENST00000548379 MALRD1Q5VYJ5 2156 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 ALPK2Q86TB3 2170 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 CADP27708 2225 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 TRAV41A0A0B4J266 112 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 C16orf90A8MZG2 172 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 F5H768 121 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 H0YJX3 145 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 LY6LH3BQJ8 138 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 UPK2O00526 184 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 SDCBPO00560 298 aaPredicted RBP2.16□□□□□ -2.06
PTCH1-216ENST00000548379 OR7C2O60412 319 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 RPP14O95059 124 aaKnown RBP2.16□□□□□ -2.06
PTCH1-216ENST00000548379 IGLV3-1P01715 115 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 IGHV3-7P01780 117 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 TTRP02766 147 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 CSN2P05814 226 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 RPSAP08865 295 aaKnown RBP2.16□□□□□ -2.06
PTCH1-216ENST00000548379 GZMHP20718 246 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 PSMB8P28062 276 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 REG1BP48304 166 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 CXCR4P61073 352 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 HBG1P69891 147 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 HBG2P69892 147 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 RUNX1Q01196 453 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 TMEM267Q0VDI3 215 aaPredicted RBP2.16□□□□□ -2.06
PTCH1-216ENST00000548379 PLGLAQ15195 96 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 MMDQ15546 238 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 Q499Y3 187 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 PDZD11Q5EBL8 140 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 PRR9Q5T870 116 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 MORN3Q6PF18 240 aaPredicted RBP2.16□□□□□ -2.06
PTCH1-216ENST00000548379 ZNF322Q6U7Q0 402 aaPredicted RBP2.16□□□□□ -2.06
PTCH1-216ENST00000548379 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
PTCH1-216ENST00000548379 TCF23Q7RTU1 214 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 STX19Q8N4C7 294 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 TCTEX1D1Q8N7M0 179 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 OR52N1Q8NH53 320 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 SMIM19Q96E16 107 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 FMC1Q96HJ9 113 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 S100A13Q99584 98 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 TTTY10Q9BZA0 68 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 CHST5Q9GZS9 411 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 LINC00574Q9H8X3 128 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 PARP11Q9NR21 331 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 TAS2R1Q9NYW7 299 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 TVP23BQ9NYZ1 205 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 RYR3Q15413 4870 aa2.16□□□□□ -2.06
PTCH1-216ENST00000548379 DYSFO75923 2080 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 IGKV1-6A0A0C4DH72 117 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 NUPR2A6NF83 97 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 METTL15A6NJ78 407 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.15□□□□□ -2.07
PTCH1-216ENST00000548379 I3L521 148 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 PDCD6O75340 191 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 IGKV1-39P01597 117 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 IGKV1D-39P04432 117 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 LGALS1P09382 135 aaKnown RBP2.15□□□□□ -2.07
PTCH1-216ENST00000548379 C8orf88P0DMB2 117 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 ATF1P18846 271 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 M6PRP20645 277 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 CCL1P22362 96 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 CNTFRP26992 372 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 TAS2R43P59537 309 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 MLLT11Q13015 90 aaPredicted RBP2.15□□□□□ -2.07
PTCH1-216ENST00000548379 RSU1Q15404 277 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 C4orf26Q17RF5 130 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 DNAL1Q4LDG9 190 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 SAPCD1Q5SSQ6 148 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 FAM162BQ5T6X4 162 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 TMEM244Q5VVB8 128 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 PRSS54Q6PEW0 395 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 PRNTQ86SH4 94 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 DHFR2Q86XF0 187 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 GID4Q8IVV7 300 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 ORMDL3Q8N138 153 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 Q8N402 240 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 OR5D14Q8NGL3 314 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 STOML3Q8TAV4 291 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 NEK7Q8TDX7 302 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 DNAJC9Q8WXX5 260 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 LEAP2Q969E1 77 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 ARL11Q969Q4 196 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 PPP1R14BQ96C90 147 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 GPER1Q99527 375 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 NIPSNAP1Q9BPW8 284 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 MRPL20Q9BYC9 149 aaKnown RBP2.15□□□□□ -2.07
PTCH1-216ENST00000548379 ARL6Q9H0F7 186 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 BABAM2Q9NXR7 383 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 TRAPPC2LQ9UL33 140 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 TP53TG1Q9Y2A0 90 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 KLK5Q9Y337 293 aaPredicted RBP2.15□□□□□ -2.07
PTCH1-216ENST00000548379 NOTCH1P46531 2555 aa2.15□□□□□ -2.07
PTCH1-216ENST00000548379 HEATR5AQ86XA9 2040 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms