RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 XCL2Q9UBD3 114 aa13.63□□□□□ -0.23
PRPF40B-206ENST00000547764 CSMD3Q7Z407 3707 aa13.62□□□□□ -0.23
PRPF40B-206ENST00000547764 HLA-DMBP28068 263 aa13.62□□□□□ -0.23
PRPF40B-206ENST00000547764 ZNF709Q8N972 641 aa13.62□□□□□ -0.23
PRPF40B-206ENST00000547764 C1QTNF4Q9BXJ3 329 aa13.62□□□□□ -0.23
PRPF40B-206ENST00000547764 IGLC2P0DOY2 106 aa13.61□□□□□ -0.23
PRPF40B-206ENST00000547764 CXCL2P19875 107 aa13.61□□□□□ -0.23
PRPF40B-206ENST00000547764 FXYD7P58549 80 aa13.61□□□□□ -0.23
PRPF40B-206ENST00000547764 Q5BKY6 102 aa13.61□□□□□ -0.23
PRPF40B-206ENST00000547764 LCN15Q6UWW0 184 aa13.61□□□□□ -0.23
PRPF40B-206ENST00000547764 ZNF738Q8NE65 137 aa13.61□□□□□ -0.23
PRPF40B-206ENST00000547764 HRH4Q9H3N8 390 aa13.61□□□□□ -0.23
PRPF40B-206ENST00000547764 WFDC1Q9HC57 220 aa13.61□□□□□ -0.23
PRPF40B-206ENST00000547764 ZNF705EA8MWA4 302 aaPredicted RBP13.6□□□□□ -0.23
PRPF40B-206ENST00000547764 C17orf112F2Z3M2 114 aa13.6□□□□□ -0.23
PRPF40B-206ENST00000547764 H3BQ15 152 aa13.6□□□□□ -0.23
PRPF40B-206ENST00000547764 H3BTX0 84 aa13.6□□□□□ -0.23
PRPF40B-206ENST00000547764 IFNA5P01569 189 aa13.6□□□□□ -0.23
PRPF40B-206ENST00000547764 GIPP09681 153 aaPredicted RBP13.6□□□□□ -0.23
PRPF40B-206ENST00000547764 PSG9Q00887 426 aa13.6□□□□□ -0.23
PRPF40B-206ENST00000547764 PSG3Q16557 428 aa13.6□□□□□ -0.23
PRPF40B-206ENST00000547764 ASB13Q8WXK3 278 aa13.6□□□□□ -0.23
PRPF40B-206ENST00000547764 SLC35B3Q9H1N7 401 aa13.6□□□□□ -0.23
PRPF40B-206ENST00000547764 ZNF331Q9NQX6 463 aaPredicted RBP13.6□□□□□ -0.23
PRPF40B-206ENST00000547764 KCNIP2Q9NS61 270 aa13.6□□□□□ -0.23
PRPF40B-206ENST00000547764 A8MTW9 85 aa13.59□□□□□ -0.23
PRPF40B-206ENST00000547764 SLC17A3O00476 420 aa13.59□□□□□ -0.23
PRPF40B-206ENST00000547764 ZNF705DP0CH99 300 aaPredicted RBP13.59□□□□□ -0.23
PRPF40B-206ENST00000547764 ZNF705BP0CI00 300 aaPredicted RBP13.59□□□□□ -0.23
PRPF40B-206ENST00000547764 SCGB1C1Q8TD33 95 aa13.59□□□□□ -0.23
PRPF40B-206ENST00000547764 SLC50A1Q9BRV3 221 aa13.59□□□□□ -0.23
PRPF40B-206ENST00000547764 C11orf68Q9H3H3 251 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-206ENST00000547764 X6R8D5 127 aa13.59□□□□□ -0.23
PRPF40B-206ENST00000547764 DEFB4AO15263 64 aa13.58□□□□□ -0.24
PRPF40B-206ENST00000547764 DUSP14O95147 198 aaKnown RBP13.58□□□□□ -0.24
PRPF40B-206ENST00000547764 CNN1P51911 297 aaKnown RBP13.58□□□□□ -0.24
PRPF40B-206ENST00000547764 Q8NAQ8 132 aa13.58□□□□□ -0.24
PRPF40B-206ENST00000547764 SAT2Q96F10 170 aaPredicted RBP13.58□□□□□ -0.24
PRPF40B-206ENST00000547764 ZNF586Q9NXT0 402 aa13.58□□□□□ -0.24
PRPF40B-206ENST00000547764 TMEM14CQ9P0S9 112 aa13.58□□□□□ -0.24
PRPF40B-206ENST00000547764 PRB4P10163 310 aaPredicted RBP13.57□□□□□ -0.24
PRPF40B-206ENST00000547764 GUK1Q16774 197 aa13.57□□□□□ -0.24
PRPF40B-206ENST00000547764 AMTNQ6UX39 209 aa13.57□□□□□ -0.24
PRPF40B-206ENST00000547764 MIR17HGQ75NE6 70 aa13.57□□□□□ -0.24
PRPF40B-206ENST00000547764 RPUSD4Q96CM3 377 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-206ENST00000547764 PARD6GQ9BYG4 376 aaPredicted RBP13.57□□□□□ -0.24
PRPF40B-206ENST00000547764 MFFQ9GZY8 342 aa13.57□□□□□ -0.24
PRPF40B-206ENST00000547764 IGHV4-28A0A0C4DH34 117 aa13.56□□□□□ -0.24
PRPF40B-206ENST00000547764 MIFP14174 115 aa13.56□□□□□ -0.24
PRPF40B-206ENST00000547764 OR8A1Q8NGG7 326 aa13.56□□□□□ -0.24
PRPF40B-206ENST00000547764 FAM167A-AS1Q96KT0 104 aa13.56□□□□□ -0.24
PRPF40B-206ENST00000547764 AQP10Q96PS8 301 aa13.56□□□□□ -0.24
PRPF40B-206ENST00000547764 SLC25A2Q9BXI2 301 aa13.56□□□□□ -0.24
PRPF40B-206ENST00000547764 ZNF705FA8MVS1 300 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 RBMY1A1P0DJD3 496 aaKnown RBP13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 RBMY1CP0DJD4 496 aa13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 PYYP10082 97 aa13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 HIST1H1EP10412 219 aaKnown RBP13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 HIST1H1AQ02539 215 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 PMS2P11Q13670 270 aa13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 RBMY1FQ15415 496 aaKnown RBP13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 FFAR4Q5NUL3 377 aa13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 ZNF705AQ6ZN79 300 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 OR2T35Q8NGX2 323 aa13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 MRPL32Q9BYC8 188 aaKnown RBP13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 RFNGQ9Y644 331 aa13.55□□□□□ -0.24
PRPF40B-206ENST00000547764 TRBV19A0A075B6N1 114 aa13.54□□□□□ -0.24
PRPF40B-206ENST00000547764 CXorf65A6NEN9 183 aa13.54□□□□□ -0.24
PRPF40B-206ENST00000547764 ZNF253O75346 499 aa13.54□□□□□ -0.24
PRPF40B-206ENST00000547764 FUT9Q9Y231 359 aa13.54□□□□□ -0.24
PRPF40B-206ENST00000547764 DYNC2H1Q8NCM8 4307 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-206ENST00000547764 PRAC2D3DTV9 90 aa13.53□□□□□ -0.24
PRPF40B-206ENST00000547764 C11orf45Q8TAV5 145 aa13.53□□□□□ -0.24
PRPF40B-206ENST00000547764 TENM2Q9NT68 2774 aa13.53□□□□□ -0.24
PRPF40B-206ENST00000547764 IGHV3OR16-12A0A075B7B8 117 aa13.52□□□□□ -0.25
PRPF40B-206ENST00000547764 FXYD6-FXYD2A0A087WZ82 144 aa13.52□□□□□ -0.25
PRPF40B-206ENST00000547764 M0R2Z0 102 aa13.52□□□□□ -0.25
PRPF40B-206ENST00000547764 NDUFB4O95168 129 aa13.52□□□□□ -0.25
PRPF40B-206ENST00000547764 RHOBP62745 196 aa13.52□□□□□ -0.25
PRPF40B-206ENST00000547764 SPINK13Q1W4C9 94 aa13.52□□□□□ -0.25
PRPF40B-206ENST00000547764 C1orf158Q8N1D5 194 aa13.52□□□□□ -0.25
PRPF40B-206ENST00000547764 BLNKQ8WV28 456 aa13.52□□□□□ -0.25
PRPF40B-206ENST00000547764 NEU1Q99519 415 aa13.52□□□□□ -0.25
PRPF40B-206ENST00000547764 OR51M1Q9H341 326 aa13.52□□□□□ -0.25
PRPF40B-206ENST00000547764 TIMM9Q9Y5J7 89 aa13.52□□□□□ -0.25
PRPF40B-206ENST00000547764 G3V3Q6 166 aa13.51□□□□□ -0.25
PRPF40B-206ENST00000547764 AMBPP02760 352 aa13.51□□□□□ -0.25
PRPF40B-206ENST00000547764 NANOS2P60321 138 aaKnown RBP13.51□□□□□ -0.25
PRPF40B-206ENST00000547764 PDE6HQ13956 83 aa13.51□□□□□ -0.25
PRPF40B-206ENST00000547764 ZNF266Q14584 549 aa13.51□□□□□ -0.25
PRPF40B-206ENST00000547764 INO80EQ8NBZ0 244 aaPredicted RBP13.51□□□□□ -0.25
PRPF40B-206ENST00000547764 IGF2BP2-AS1Q96M15 143 aa13.51□□□□□ -0.25
PRPF40B-206ENST00000547764 TNFSF18Q9UNG2 199 aa13.51□□□□□ -0.25
PRPF40B-206ENST00000547764 GOLT1BQ9Y3E0 138 aa13.51□□□□□ -0.25
PRPF40B-206ENST00000547764 RNF222A6NCQ9 220 aa13.5□□□□□ -0.25
PRPF40B-206ENST00000547764 BOLA2-SMG1P6H3BVE0 249 aa13.5□□□□□ -0.25
PRPF40B-206ENST00000547764 CRXO43186 299 aaPredicted RBP13.5□□□□□ -0.25
PRPF40B-206ENST00000547764 FXYD5Q96DB9 178 aa13.5□□□□□ -0.25
PRPF40B-206ENST00000547764 PAXXQ9BUH6 204 aa13.5□□□□□ -0.25
PRPF40B-206ENST00000547764 PPP1R14DQ9NXH3 145 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms