RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 TRBV20OR9-2A0A075B6H5 130 aa10.37□□□□□ -0.75
PTCH1-215ENST00000547672 MGST1P10620 155 aaKnown RBP10.37□□□□□ -0.75
PTCH1-215ENST00000547672 SIGLEC15Q6ZMC9 328 aa10.37□□□□□ -0.75
PTCH1-215ENST00000547672 FAM231DQ6ZW35 169 aa10.37□□□□□ -0.75
PTCH1-215ENST00000547672 C1QL4Q86Z23 238 aa10.37□□□□□ -0.75
PTCH1-215ENST00000547672 LURAP1LQ8IV03 231 aa10.37□□□□□ -0.75
PTCH1-215ENST00000547672 TMEM75Q8N9X5 138 aa10.37□□□□□ -0.75
PTCH1-215ENST00000547672 FAM210BQ96KR6 192 aa10.37□□□□□ -0.75
PTCH1-215ENST00000547672 MAP1AP78559 2803 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-215ENST00000547672 PPP5D1E7EU14 171 aa10.36□□□□□ -0.75
PTCH1-215ENST00000547672 PFN1P07737 140 aaKnown RBP10.36□□□□□ -0.75
PTCH1-215ENST00000547672 FOSL1P15407 271 aa10.36□□□□□ -0.75
PTCH1-215ENST00000547672 FLI1Q01543 452 aaPredicted RBP10.36□□□□□ -0.75
PTCH1-215ENST00000547672 COX19Q49B96 90 aa10.36□□□□□ -0.75
PTCH1-215ENST00000547672 SAPCD1Q5SSQ6 148 aa10.36□□□□□ -0.75
PTCH1-215ENST00000547672 C16orf54Q6UWD8 224 aa10.36□□□□□ -0.75
PTCH1-215ENST00000547672 MRPL53Q96EL3 112 aaKnown RBP10.36□□□□□ -0.75
PTCH1-215ENST00000547672 DAZAP1Q96EP5 407 aaKnown RBP10.36□□□□□ -0.75
PTCH1-215ENST00000547672 IGF2BP2-AS1Q96M15 143 aa10.36□□□□□ -0.75
PTCH1-215ENST00000547672 YPEL4Q96NS1 127 aa10.36□□□□□ -0.75
PTCH1-215ENST00000547672 IGHV3-35A0A0C4DH35 117 aa10.35□□□□□ -0.75
PTCH1-215ENST00000547672 ZNF320A2RRD8 509 aa10.35□□□□□ -0.75
PTCH1-215ENST00000547672 IGHV3-11P01762 117 aa10.35□□□□□ -0.75
PTCH1-215ENST00000547672 RPS10P46783 165 aaKnown RBP10.35□□□□□ -0.75
PTCH1-215ENST00000547672 RPEL1Q2QD12 228 aa10.35□□□□□ -0.75
PTCH1-215ENST00000547672 PYGO2Q9BRQ0 406 aa10.35□□□□□ -0.75
PTCH1-215ENST00000547672 DAZ1Q9NQZ3 744 aaKnown RBP10.35□□□□□ -0.75
PTCH1-215ENST00000547672 IL36BQ9NZH7 164 aa10.35□□□□□ -0.75
PTCH1-215ENST00000547672 URGCP-MRPS24S4R325 110 aa10.35□□□□□ -0.75
PTCH1-215ENST00000547672 CLPSL1A2RUU4 121 aa10.34□□□□□ -0.75
PTCH1-215ENST00000547672 DIRC3C9JPN6 131 aa10.34□□□□□ -0.75
PTCH1-215ENST00000547672 LTAP01374 205 aa10.34□□□□□ -0.75
PTCH1-215ENST00000547672 LGALS1P09382 135 aaKnown RBP10.34□□□□□ -0.75
PTCH1-215ENST00000547672 SRD5A1P18405 259 aa10.34□□□□□ -0.75
PTCH1-215ENST00000547672 PSG3Q16557 428 aa10.34□□□□□ -0.75
PTCH1-215ENST00000547672 IBA57Q5T440 356 aaKnown RBP10.34□□□□□ -0.75
PTCH1-215ENST00000547672 GOLT1AQ6ZVE7 132 aa10.34□□□□□ -0.75
PTCH1-215ENST00000547672 TMEM183AQ8IXX5 376 aa10.34□□□□□ -0.75
PTCH1-215ENST00000547672 EXOC3-AS1Q8N2X6 119 aa10.34□□□□□ -0.75
PTCH1-215ENST00000547672 MYOZ3Q8TDC0 251 aa10.34□□□□□ -0.75
PTCH1-215ENST00000547672 ZNF331Q9NQX6 463 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-215ENST00000547672 ZNF492Q9P255 531 aa10.34□□□□□ -0.75
PTCH1-215ENST00000547672 RPH3ALQ9UNE2 315 aa10.34□□□□□ -0.75
PTCH1-215ENST00000547672 RBAKDNA6NC62 111 aa10.33□□□□□ -0.76
PTCH1-215ENST00000547672 DNAJC9-AS1A6NH13 148 aa10.33□□□□□ -0.76
PTCH1-215ENST00000547672 H3BTX0 84 aa10.33□□□□□ -0.76
PTCH1-215ENST00000547672 K7EN84 100 aa10.33□□□□□ -0.76
PTCH1-215ENST00000547672 LGALS9O00182 355 aa10.33□□□□□ -0.76
PTCH1-215ENST00000547672 GATCO43716 136 aaKnown RBP10.33□□□□□ -0.76
PTCH1-215ENST00000547672 CDX1P47902 265 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-215ENST00000547672 GNG5P63218 68 aa10.33□□□□□ -0.76
PTCH1-215ENST00000547672 KRTAP1-1Q07627 177 aa10.33□□□□□ -0.76
PTCH1-215ENST00000547672 NDFIP1Q9BT67 221 aa10.33□□□□□ -0.76
PTCH1-215ENST00000547672 SRD5A3Q9H8P0 318 aa10.33□□□□□ -0.76
PTCH1-215ENST00000547672 AURKAIP1Q9NWT8 199 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-215ENST00000547672 TRAV34A0A0B4J273 112 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 IGHV7-4-1A0A0J9YVY3 117 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 PGPEP1LA6NFU8 196 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 IGLV2-8P01709 118 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 TYMSP04818 313 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 RNASE1P07998 156 aaKnown RBP10.32□□□□□ -0.76
PTCH1-215ENST00000547672 SNRPCP09234 159 aaKnown RBP10.32□□□□□ -0.76
PTCH1-215ENST00000547672 CT45A10P0DMU9 189 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 FAM3BP58499 235 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-215ENST00000547672 IL17RELQ6ZVW7 336 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 KLHDC1Q8N7A1 406 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 OR4B1Q8NGF8 309 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 GLMPQ8WWB7 406 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 LINC00479Q96M42 142 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 C17orf77Q96MU5 243 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 MLST8Q9BVC4 326 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 SERTAD4Q9NUC0 356 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 SMPXQ9UHP9 88 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 PSG8Q9UQ74 426 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 SMAD5-AS1Q9Y6J3 95 aa10.32□□□□□ -0.76
PTCH1-215ENST00000547672 TEX15Q9BXT5 2789 aa10.31□□□□□ -0.76
PTCH1-215ENST00000547672 TGIF2-C20orf24A0A0A6YYL0 155 aa10.31□□□□□ -0.76
PTCH1-215ENST00000547672 FAM181BA6NEQ2 426 aa10.31□□□□□ -0.76
PTCH1-215ENST00000547672 ZNF705GA8MUZ8 300 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-215ENST00000547672 A8MWL6 223 aa10.31□□□□□ -0.76
PTCH1-215ENST00000547672 M0QZ24 198 aa10.31□□□□□ -0.76
PTCH1-215ENST00000547672 RPLP1P05386 114 aaKnown RBP10.31□□□□□ -0.76
PTCH1-215ENST00000547672 S100A6P06703 90 aa10.31□□□□□ -0.76
PTCH1-215ENST00000547672 TMEM95Q3KNT9 176 aa10.31□□□□□ -0.76
PTCH1-215ENST00000547672 CT83Q5H943 113 aa10.31□□□□□ -0.76
PTCH1-215ENST00000547672 LCN12Q6JVE5 192 aa10.31□□□□□ -0.76
PTCH1-215ENST00000547672 REC114Q7Z4M0 266 aa10.31□□□□□ -0.76
PTCH1-215ENST00000547672 PRNTQ86SH4 94 aa10.31□□□□□ -0.76
PTCH1-215ENST00000547672 C16orf95Q9H693 158 aa10.31□□□□□ -0.76
PTCH1-215ENST00000547672 IGHV3OR16-8A0A075B7F1 116 aa10.3□□□□□ -0.76
PTCH1-215ENST00000547672 A0A1W2PPQ1 181 aa10.3□□□□□ -0.76
PTCH1-215ENST00000547672 FAM231BA6NCW3 169 aa10.3□□□□□ -0.76
PTCH1-215ENST00000547672 P01737 135 aa10.3□□□□□ -0.76
PTCH1-215ENST00000547672 ID1P41134 155 aa10.3□□□□□ -0.76
PTCH1-215ENST00000547672 OR5I1Q13606 314 aa10.3□□□□□ -0.76
PTCH1-215ENST00000547672 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.3□□□□□ -0.76
PTCH1-215ENST00000547672 Q86TA4 180 aa10.3□□□□□ -0.76
PTCH1-215ENST00000547672 DPF1Q92782 380 aa10.3□□□□□ -0.76
PTCH1-215ENST00000547672 C16orf92Q96LL3 132 aa10.3□□□□□ -0.76
PTCH1-215ENST00000547672 SAV1Q9H4B6 383 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms