RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 HIST1H1AQ02539 215 aaPredicted RBP9.43□□□□□ -0.9
CPSF6-204ENST00000547486 FCN2Q15485 313 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 PSG3Q16557 428 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 MORN5Q5VZ52 161 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 TMEM88Q6PEY1 159 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 LINC00336Q6ZUF6 198 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 TMEM37Q8WXS4 190 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 C20orf85Q9H1P6 137 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 MGAT4CQ9UBM8 478 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 PCLOQ9Y6V0 5065 aa9.43□□□□□ -0.9
CPSF6-204ENST00000547486 IGLV2-18A0A075B6J9 118 aa9.42□□□□□ -0.9
CPSF6-204ENST00000547486 BOLA2-SMG1P6H3BVE0 249 aa9.42□□□□□ -0.9
CPSF6-204ENST00000547486 GOSR2O14653 212 aa9.42□□□□□ -0.9
CPSF6-204ENST00000547486 LGALS9BQ3B8N2 356 aa9.42□□□□□ -0.9
CPSF6-204ENST00000547486 LINC00305Q7Z4B0 112 aa9.42□□□□□ -0.9
CPSF6-204ENST00000547486 LRRC20Q8TCA0 184 aa9.42□□□□□ -0.9
CPSF6-204ENST00000547486 MGST2Q99735 147 aa9.42□□□□□ -0.9
CPSF6-204ENST00000547486 GGACTQ9BVM4 153 aa9.42□□□□□ -0.9
CPSF6-204ENST00000547486 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
CPSF6-204ENST00000547486 TRAV6A0A075B6T7 132 aa9.41□□□□□ -0.9
CPSF6-204ENST00000547486 LYRM1O43325 122 aa9.41□□□□□ -0.9
CPSF6-204ENST00000547486 TCRBP04435 133 aa9.41□□□□□ -0.9
CPSF6-204ENST00000547486 RHOBP62745 196 aa9.41□□□□□ -0.9
CPSF6-204ENST00000547486 CNPY1Q3B7I2 92 aa9.41□□□□□ -0.9
CPSF6-204ENST00000547486 PXDC1Q5TGL8 231 aa9.41□□□□□ -0.9
CPSF6-204ENST00000547486 Q6ZR54 194 aa9.41□□□□□ -0.9
CPSF6-204ENST00000547486 ZNF546Q86UE3 836 aa9.41□□□□□ -0.9
CPSF6-204ENST00000547486 RPUSD4Q96CM3 377 aaKnown RBP9.41□□□□□ -0.9
CPSF6-204ENST00000547486 LINC01587Q99440 93 aa9.41□□□□□ -0.9
CPSF6-204ENST00000547486 SEC22CQ9BRL7 303 aa9.41□□□□□ -0.9
CPSF6-204ENST00000547486 C11orf1Q9H5F2 150 aa9.41□□□□□ -0.9
CPSF6-204ENST00000547486 PRSS29PA6NIE9 313 aa9.4□□□□□ -0.9
CPSF6-204ENST00000547486 FAM25EA8MYX2 175 aa9.4□□□□□ -0.9
CPSF6-204ENST00000547486 PRAC2D3DTV9 90 aa9.4□□□□□ -0.9
CPSF6-204ENST00000547486 H3BTX0 84 aa9.4□□□□□ -0.9
CPSF6-204ENST00000547486 DEFB130BP0DP73 79 aa9.4□□□□□ -0.9
CPSF6-204ENST00000547486 DEFB130AP0DP74 79 aa9.4□□□□□ -0.9
CPSF6-204ENST00000547486 TSPOP30536 169 aa9.4□□□□□ -0.9
CPSF6-204ENST00000547486 B2MP61769 119 aa9.4□□□□□ -0.9
CPSF6-204ENST00000547486 KIR3DS1Q14943 382 aa9.4□□□□□ -0.9
CPSF6-204ENST00000547486 RNF212Q495C1 297 aa9.4□□□□□ -0.9
CPSF6-204ENST00000547486 UBE2DNLQ8IWF7 75 aa9.4□□□□□ -0.9
CPSF6-204ENST00000547486 ZNF331Q9NQX6 463 aaPredicted RBP9.4□□□□□ -0.9
CPSF6-204ENST00000547486 LSM5Q9Y4Y9 91 aaKnown RBP9.4□□□□□ -0.9
CPSF6-204ENST00000547486 TRAV5A0A0B4J249 113 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 FAM24AA6NFZ4 105 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 LYRM9A8MSI8 78 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 H3BQ15 152 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 L7N2F9 121 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 SLC17A3O00476 420 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 CST7O76096 145 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 HTN1P15515 57 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 VAMP2P63027 116 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 OPCMLQ14982 345 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 S100A7AQ86SG5 101 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 ZNF431Q8TF32 576 aaPredicted RBP9.39□□□□□ -0.91
CPSF6-204ENST00000547486 PARD6GQ9BYG4 376 aaPredicted RBP9.39□□□□□ -0.91
CPSF6-204ENST00000547486 NUDT15Q9NV35 164 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 PPP1R14DQ9NXH3 145 aa9.39□□□□□ -0.91
CPSF6-204ENST00000547486 C5orf51A6NDU8 294 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 COX7A2P2O60397 106 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 IGLC2P0DOY2 106 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 CXCL2P19875 107 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 CAMLGP49069 296 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 BCAP31P51572 246 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 CAV2P51636 162 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 TAS2R60P59551 318 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 IL15RAQ13261 267 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 ZNF846Q147U1 533 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 C10orf113Q5VZT2 155 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 NRARPQ7Z6K4 114 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 BPIFA4PQ86YQ2 179 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 SAT2Q96F10 170 aaPredicted RBP9.38□□□□□ -0.91
CPSF6-204ENST00000547486 C2orf50Q96LR7 162 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 DNAJC4Q9NNZ3 241 aa9.38□□□□□ -0.91
CPSF6-204ENST00000547486 F5H768 121 aa9.37□□□□□ -0.91
CPSF6-204ENST00000547486 CDKN1BP46527 198 aa9.37□□□□□ -0.91
CPSF6-204ENST00000547486 MIC13Q5XKP0 118 aa9.37□□□□□ -0.91
CPSF6-204ENST00000547486 LCN15Q6UWW0 184 aa9.37□□□□□ -0.91
CPSF6-204ENST00000547486 TMEM256Q8N2U0 113 aa9.37□□□□□ -0.91
CPSF6-204ENST00000547486 C12orf45Q8N5I9 185 aaPredicted RBP9.37□□□□□ -0.91
CPSF6-204ENST00000547486 SLC50A1Q9BRV3 221 aa9.37□□□□□ -0.91
CPSF6-204ENST00000547486 RNF24Q9Y225 148 aa9.37□□□□□ -0.91
CPSF6-204ENST00000547486 WDR83OSQ9Y284 106 aa9.37□□□□□ -0.91
CPSF6-204ENST00000547486 PKHD1P08F94 4074 aa9.37□□□□□ -0.91
CPSF6-204ENST00000547486 IGSF23A1L1A6 192 aa9.36□□□□□ -0.91
CPSF6-204ENST00000547486 CBY3A6NI87 242 aa9.36□□□□□ -0.91
CPSF6-204ENST00000547486 H2AFB2P0C5Z0 115 aa9.36□□□□□ -0.91
CPSF6-204ENST00000547486 VWC2Q2TAL6 325 aa9.36□□□□□ -0.91
CPSF6-204ENST00000547486 RNASE8Q8TDE3 154 aaKnown RBP9.36□□□□□ -0.91
CPSF6-204ENST00000547486 NOP10Q9NPE3 64 aaKnown RBP9.36□□□□□ -0.91
CPSF6-204ENST00000547486 UQCC1Q9NVA1 299 aa9.36□□□□□ -0.91
CPSF6-204ENST00000547486 NDUFA13Q9P0J0 144 aa9.36□□□□□ -0.91
CPSF6-204ENST00000547486 RAB31Q13636 194 aa9.35□□□□□ -0.91
CPSF6-204ENST00000547486 Q6ZRG5 221 aa9.35□□□□□ -0.91
CPSF6-204ENST00000547486 TMEM252Q8N6L7 170 aa9.35□□□□□ -0.91
CPSF6-204ENST00000547486 C15orf53Q8NAA6 179 aa9.35□□□□□ -0.91
CPSF6-204ENST00000547486 C16orf74Q96GX8 76 aa9.35□□□□□ -0.91
CPSF6-204ENST00000547486 ZNF586Q9NXT0 402 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms