RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 LYRM9A8MSI8 78 aa13.09□□□□□ -0.31
CHERP-204ENST00000546538 SNRPCP09234 159 aaKnown RBP13.09□□□□□ -0.31
CHERP-204ENST00000546538 DEFB130BP0DP73 79 aa13.09□□□□□ -0.31
CHERP-204ENST00000546538 DEFB130AP0DP74 79 aa13.09□□□□□ -0.31
CHERP-204ENST00000546538 PSG3Q16557 428 aa13.09□□□□□ -0.31
CHERP-204ENST00000546538 MORN5Q5VZ52 161 aa13.09□□□□□ -0.31
CHERP-204ENST00000546538 ZNF575Q86XF7 245 aa13.09□□□□□ -0.31
CHERP-204ENST00000546538 ARL6Q9H0F7 186 aa13.09□□□□□ -0.31
CHERP-204ENST00000546538 SELENOTP62341 195 aa13.08□□□□□ -0.32
CHERP-204ENST00000546538 SPANXN2Q5MJ10 180 aa13.08□□□□□ -0.32
CHERP-204ENST00000546538 ARV1Q9H2C2 271 aa13.08□□□□□ -0.32
CHERP-204ENST00000546538 NAP1L6A6NFF2 107 aa13.07□□□□□ -0.32
CHERP-204ENST00000546538 FNDC10F2Z333 226 aa13.07□□□□□ -0.32
CHERP-204ENST00000546538 IAH1Q2TAA2 248 aaPredicted RBP13.07□□□□□ -0.32
CHERP-204ENST00000546538 ZBTB8BQ8NAP8 495 aaPredicted RBP13.07□□□□□ -0.32
CHERP-204ENST00000546538 PARD6GQ9BYG4 376 aaPredicted RBP13.07□□□□□ -0.32
CHERP-204ENST00000546538 NPVFQ9HCQ7 196 aa13.07□□□□□ -0.32
CHERP-204ENST00000546538 C7orf66A4D0T2 115 aa13.06□□□□□ -0.32
CHERP-204ENST00000546538 A6NHS1 94 aa13.06□□□□□ -0.32
CHERP-204ENST00000546538 PRAC2D3DTV9 90 aa13.06□□□□□ -0.32
CHERP-204ENST00000546538 SLC17A3O00476 420 aa13.06□□□□□ -0.32
CHERP-204ENST00000546538 SCGB1D2O95969 90 aa13.06□□□□□ -0.32
CHERP-204ENST00000546538 MBPP02686 304 aaPredicted RBP13.06□□□□□ -0.32
CHERP-204ENST00000546538 TRIQKQ629K1 86 aa13.06□□□□□ -0.32
CHERP-204ENST00000546538 C15orf53Q8NAA6 179 aa13.06□□□□□ -0.32
CHERP-204ENST00000546538 TMEM37Q8WXS4 190 aa13.06□□□□□ -0.32
CHERP-204ENST00000546538 MGST2Q99735 147 aa13.06□□□□□ -0.32
CHERP-204ENST00000546538 KRTAP4-5Q9BYR2 181 aa13.06□□□□□ -0.32
CHERP-204ENST00000546538 DNAH5Q8TE73 4624 aa13.06□□□□□ -0.32
CHERP-204ENST00000546538 ZNF701M0R085 212 aaPredicted RBP13.05□□□□□ -0.32
CHERP-204ENST00000546538 TSC22D2O75157 780 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 S100A7P31151 101 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 C4orf46Q504U0 113 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 TEPPQ6URK8 271 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 OR10P1Q8NGE3 313 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 ZNRF2Q8NHG8 242 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 MITD1Q8WV92 249 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 RPUSD4Q96CM3 377 aaKnown RBP13.05□□□□□ -0.32
CHERP-204ENST00000546538 LINC01587Q99440 93 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 ZNF331Q9NQX6 463 aaPredicted RBP13.05□□□□□ -0.32
CHERP-204ENST00000546538 H3BTX0 84 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 AGPAT2O15120 278 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 TAS2R30P59541 319 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 TAS2R60P59551 318 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 B2MP61769 119 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 RHOBP62745 196 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 C1orf134Q5TEV5 83 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 LINC00305Q7Z4B0 112 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 RNASE8Q8TDE3 154 aaKnown RBP13.05□□□□□ -0.32
CHERP-204ENST00000546538 C11orf1Q9H5F2 150 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 GSKIPQ9P0R6 139 aa13.05□□□□□ -0.32
CHERP-204ENST00000546538 F5H768 121 aa13.04□□□□□ -0.32
CHERP-204ENST00000546538 CCSO14618 274 aa13.04□□□□□ -0.32
CHERP-204ENST00000546538 PLA2G10O15496 165 aa13.04□□□□□ -0.32
CHERP-204ENST00000546538 IL7P13232 177 aa13.04□□□□□ -0.32
CHERP-204ENST00000546538 H3BQ15 152 aa13.03□□□□□ -0.32
CHERP-204ENST00000546538 IGLC2P0DOY2 106 aa13.03□□□□□ -0.32
CHERP-204ENST00000546538 HTN1P15515 57 aa13.03□□□□□ -0.32
CHERP-204ENST00000546538 INPP1P49441 399 aa13.03□□□□□ -0.32
CHERP-204ENST00000546538 TNP2Q05952 138 aa13.03□□□□□ -0.32
CHERP-204ENST00000546538 OPCMLQ14982 345 aa13.03□□□□□ -0.32
CHERP-204ENST00000546538 TMEM256Q8N2U0 113 aa13.03□□□□□ -0.32
CHERP-204ENST00000546538 RNF141Q8WVD5 230 aa13.03□□□□□ -0.32
CHERP-204ENST00000546538 MGAT4CQ9UBM8 478 aa13.03□□□□□ -0.32
CHERP-204ENST00000546538 CBY3A6NI87 242 aa13.02□□□□□ -0.33
CHERP-204ENST00000546538 CDKN1BP46527 198 aa13.02□□□□□ -0.33
CHERP-204ENST00000546538 FAM3BP58499 235 aaPredicted RBP13.02□□□□□ -0.33
CHERP-204ENST00000546538 ZNF546Q86UE3 836 aa13.02□□□□□ -0.33
CHERP-204ENST00000546538 SAT2Q96F10 170 aaPredicted RBP13.02□□□□□ -0.33
CHERP-204ENST00000546538 NOP10Q9NPE3 64 aaKnown RBP13.02□□□□□ -0.33
CHERP-204ENST00000546538 LINC00588Q9Y4M8 146 aa13.02□□□□□ -0.33
CHERP-204ENST00000546538 NBDYA0A0U1RRE5 68 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 GOSR2O14653 212 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 NUDT3O95989 172 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 ATP5G1P05496 136 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 CXCL2P19875 107 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 ATP5G3P48201 142 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 PXDC1Q5TGL8 231 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 GFI1BQ5VTD9 330 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 LCN15Q6UWW0 184 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 LINC00612Q8N6U2 182 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 LRRC20Q8TCA0 184 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 C16orf74Q96GX8 76 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 C20orf85Q9H1P6 137 aa13.01□□□□□ -0.33
CHERP-204ENST00000546538 TRAV5A0A0B4J249 113 aa13□□□□□ -0.33
CHERP-204ENST00000546538 TMEM263Q8WUH6 116 aaKnown RBP13□□□□□ -0.33
CHERP-204ENST00000546538 GGACTQ9BVM4 153 aa13□□□□□ -0.33
CHERP-204ENST00000546538 SOHLH1Q5JUK2 328 aa12.99□□□□□ -0.33
CHERP-204ENST00000546538 SLC50A1Q9BRV3 221 aa12.99□□□□□ -0.33
CHERP-204ENST00000546538 ATG101Q9BSB4 218 aa12.99□□□□□ -0.33
CHERP-204ENST00000546538 TIMM8BQ9Y5J9 83 aaPredicted RBP12.99□□□□□ -0.33
CHERP-204ENST00000546538 H7BYZ3 331 aa12.98□□□□□ -0.33
CHERP-204ENST00000546538 COX7A2P2O60397 106 aa12.98□□□□□ -0.33
CHERP-204ENST00000546538 HOXA5P20719 270 aa12.98□□□□□ -0.33
CHERP-204ENST00000546538 MIC13Q5XKP0 118 aa12.98□□□□□ -0.33
CHERP-204ENST00000546538 BPIFA4PQ86YQ2 179 aa12.98□□□□□ -0.33
CHERP-204ENST00000546538 KRTAP1-5Q9BYS1 174 aa12.98□□□□□ -0.33
CHERP-204ENST00000546538 PPP1R14DQ9NXH3 145 aa12.98□□□□□ -0.33
CHERP-204ENST00000546538 CST7O76096 145 aa12.97□□□□□ -0.33
CHERP-204ENST00000546538 CT45A10P0DMU9 189 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms