RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 SEPSECSQ9HD40 501 aaKnown RBP4.75□□□□□ -1.65
PRKDC-211ENST00000546304 ZMAT5Q9UDW3 170 aaKnown RBP4.75□□□□□ -1.65
PRKDC-211ENST00000546304 HUWE1Q7Z6Z7 4374 aaKnown RBP4.74□□□□□ -1.65
PRKDC-211ENST00000546304 IGKV3-7A0A075B6H7 116 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 A0A0D9SG52 128 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 KANTRA0A1W2PQU2 76 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 HELTA6NFD8 242 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 OR4C46A6NHA9 309 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 ZNF98A6NK75 572 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 TAAR5O14804 337 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 PFDN1O60925 122 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 CD5P06127 495 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 GP9P14770 177 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 CXCL2P19875 107 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 GCSAMLQ5JQS6 135 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 FFAR4Q5NUL3 377 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 C1orf194Q5T5A4 169 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 C10orf113Q5VZT2 155 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 FAM90A2PQ658T7 463 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 LEMD1Q68G75 181 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 SIGLEC15Q6ZMC9 328 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 LINC00305Q7Z4B0 112 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 S100A7AQ86SG5 101 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 OR8I2Q8N0Y5 310 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 STXBP6Q8NFX7 210 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 OR1L4Q8NGR5 311 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 OR2G3Q8NGZ4 309 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 TMEM37Q8WXS4 190 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 HYLS1Q96M11 299 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 PRR25Q96S07 402 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 NEURL2Q9BR09 285 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 PSMG3Q9BT73 122 aaPredicted RBP4.74□□□□□ -1.65
PRKDC-211ENST00000546304 SLC25A39Q9BZJ4 359 aaPredicted RBP4.74□□□□□ -1.65
PRKDC-211ENST00000546304 SH3BGRL3Q9H299 93 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 SLC25A32Q9H2D1 315 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 RNF24Q9Y225 148 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 TIMM9Q9Y5J7 89 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 STAB2Q8WWQ8 2551 aa4.74□□□□□ -1.65
PRKDC-211ENST00000546304 AGRNO00468 2067 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 TRAV2A0A0B4J234 112 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 JTBO76095 146 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 PRB2P02812 416 aaPredicted RBP4.73□□□□□ -1.65
PRKDC-211ENST00000546304 RPL7P18124 248 aaKnown RBP4.73□□□□□ -1.65
PRKDC-211ENST00000546304 ATP6V0CP27449 155 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 GALR1P47211 349 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 CD81P60033 236 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 FOXI1Q12951 378 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 MORN5Q5VZ52 161 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 PATE2Q6UY27 113 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 GTSCR1Q86UQ5 136 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 C9orf62Q8N4C0 152 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 GBGT1Q8N5D6 347 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 GATAD1Q8WUU5 269 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 GNPNAT1Q96EK6 184 aaPredicted RBP4.73□□□□□ -1.65
PRKDC-211ENST00000546304 GPR82Q96P67 336 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 ZNF471Q9BX82 626 aaPredicted RBP4.73□□□□□ -1.65
PRKDC-211ENST00000546304 MRPL32Q9BYC8 188 aaKnown RBP4.73□□□□□ -1.65
PRKDC-211ENST00000546304 MS4A6AQ9H2W1 248 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 NRN1Q9NPD7 142 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 CYTL1Q9NRR1 136 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 TENM3Q9P273 2699 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 TGP01266 2768 aa4.73□□□□□ -1.65
PRKDC-211ENST00000546304 NBEAL2Q6ZNJ1 2754 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 ZNF785A8K8V0 405 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 NUDT3O95989 172 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 CD7P09564 240 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 M6PRP20645 277 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 TFPI2P48307 235 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 RAB2AP61019 212 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 PAFAH1B2P68402 229 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 ACOT6Q3I5F7 207 aaPredicted RBP4.72□□□□□ -1.65
PRKDC-211ENST00000546304 ODF3L2Q3SX64 289 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 FAM78BQ5VT40 261 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 SAMD13Q5VXD3 122 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 SPATA31B1PQ5VZV4 182 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 TMUB2Q71RG4 321 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 STOML3Q8TAV4 291 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 DCANP1Q8TF63 244 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 WFDC10AQ9H1F0 79 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 DNAJC4Q9NNZ3 241 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 RFNGQ9Y644 331 aa4.72□□□□□ -1.65
PRKDC-211ENST00000546304 A0A087X0K7 114 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 K7EIL1 84 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 K7EQG2 157 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 DNASE2O00115 360 aaPredicted RBP4.71□□□□□ -1.66
PRKDC-211ENST00000546304 SOCS3O14543 225 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 MRPS12O15235 138 aaKnown RBP4.71□□□□□ -1.66
PRKDC-211ENST00000546304 SCGB1D1O95968 90 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 MBP02144 154 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 ZNF688P0C7X2 276 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 IGLC2P0DOY2 106 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 SPP1P10451 314 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 TPT1P13693 172 aaKnown RBP4.71□□□□□ -1.66
PRKDC-211ENST00000546304 CDC34P49427 236 aaPredicted RBP4.71□□□□□ -1.66
PRKDC-211ENST00000546304 PSMB3P49720 205 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 MEOX2P50222 304 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 NKX2-5P52952 324 aaPredicted RBP4.71□□□□□ -1.66
PRKDC-211ENST00000546304 RHOBP62745 196 aa4.71□□□□□ -1.66
PRKDC-211ENST00000546304 EIF5AP63241 154 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms